Cellulosome Database Search

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Genome ifo

GCF_009931695.1: Anaerocolumna sedimenticola, CBA3638 [+] (ncbi)

Genbanks info:

Genbank_acc: WP_161836693.1:CGBCBOCH_00579
Genome uid: 51
653572-654747 [+] (391)

Sequence:

TQLLVKLFVKDYTSTEKSKVRTAYGVLTSIVGIICNIILFGIKLVIGLIINSISVMADAFNNLSDAASSIIGLVGVKLAE
RPADKEHPFGHGRFEYIAAFAVSFLILQVGFTCFKSAFTKILHPEEVGFNWILVGILCISVLIKLWLSLFNRTLGKRINS
NVMKATATDALGDVLITTTTIVSVIIGQLTGFMVDGWMGVIVSVFVILAGINIARETLEPLLGEAVDREVYEAITKKVEE
YEGIIGSHDLIVHNYGPSHTMATIHAEVPNDVNLEEAHETIDRIERDVLREMGIFLVIHMDPIEINDQKVVEKKEVVIQV
VKDLEPKSNIHDFRVVNGENHINLIFDLVVPFSYNEQQEQELLLKIEEALRKIDERYQIVITIENSYIAE

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	0	23			1801446	130109	3	136:Membrane Protein	15	0	1	572	0	1
2	DeepTMHMM:inside		inside	1	27			1842659	130109	9730	15	0	1	572	0	2
3	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	23	47			1801450	130109	5	136:Membrane Protein	15	0	1	572	0	3
4	SUPERFAMILY:SSF161111	IPR027469	Cation efflux transmembrane domain superfamily	26	224			1801459	130109	2193	137:Transmembrane	15	0	1	572	0	4
5	DeepTMHMM:TMhelix		TMhelix	28	51			1842660	130109	2056	141:DeepTMHMM: helix	15	0	1	572	5	5
6	PFAM:PF01545	IPR002524	Cation efflux family	30	223	153.5	5.60519E-45	1801444	130109	2191	15	0	1	572	0	6
7	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	47	96			1801456	130109	18	136:Membrane Protein	15	0	1	572	0	7
8	DeepTMHMM:outside		outside	52	53			1842662	130109	10025	15	0	1	572	0	8
9	DeepTMHMM:TMhelix		TMhelix	54	80			1842664	130109	2056	141:DeepTMHMM: helix	15	0	1	572	5	9
10	DeepTMHMM:inside		inside	81	94			1842666	130109	9730	15	0	1	572	0	10
11	DeepTMHMM:TMhelix		TMhelix	95	119			1842668	130109	2056	141:DeepTMHMM: helix	15	0	1	572	5	11
12	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	96	118			1801451	130109	5	136:Membrane Protein	15	0	1	572	0	12
13	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	118	129			1801448	130109	3	136:Membrane Protein	15	0	1	572	0	13
14	DeepTMHMM:outside		outside	120	131			1842670	130109	10025	15	0	1	572	0	14
15	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	129	150			1801449	130109	5	136:Membrane Protein	15	0	1	572	0	15
16	DeepTMHMM:TMhelix		TMhelix	132	152			1842672	130109	2056	141:DeepTMHMM: helix	15	0	1	572	5	16
17	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	150	170			1801454	130109	18	136:Membrane Protein	15	0	1	572	0	17
18	DeepTMHMM:inside		inside	153	170			1842674	130109	9730	15	0	1	572	0	18
19	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	170	191			1801452	130109	5	136:Membrane Protein	15	0	1	572	0	19
20	DeepTMHMM:TMhelix		TMhelix	171	191			1842676	130109	2056	141:DeepTMHMM: helix	15	0	1	572	5	20
21	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	191	196			1801447	130109	3	136:Membrane Protein	15	0	1	572	0	21
22	DeepTMHMM:outside		outside	192	196			1842678	130109	10025	15	0	1	572	0	22
23	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	196	215			1801453	130109	5	136:Membrane Protein	15	0	1	572	0	23
24	DeepTMHMM:TMhelix		TMhelix	197	215			1842683	130109	2056	141:DeepTMHMM: helix	15	0	1	572	5	24
25	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	215	391			1801455	130109	18	136:Membrane Protein	15	0	1	572	0	25
26	DeepTMHMM:inside		inside	216	391			1842684	130109	9730	15	0	1	572	0	26
27	SUPERFAMILY:SSF160240	IPR036837	Cation efflux protein, cytoplasmic domain superfamily	225	306			1801457	130109	2192	15	0	1	572	0	27
28	PFAM:PF16916	IPR027470	Dimerisation domain of Zinc Transporter	227	303	50.6	1.5E-13	1801445	130109	2190	15	0	1	572	0	28
29	SUPERFAMILY:SSF160240	IPR036837	Cation efflux protein, cytoplasmic domain superfamily	315	385			1801458	130109	2192	15	0	1	572	0	29

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