Cellulosome Database Search

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Genome ifo

GCF_000015865.1: Acetivibrio thermocellus, ATCC 27405 [+] (ncbi)

Genbanks info:

Genbank_acc: WP_003516738.1:CGDJLPJG_02209
Genome uid: 34
2491872-2493836 [+] (654)

Sequence:

DRKTFYITTPIYYPSDKLHIGHSYTTVAADAVARYKRLKGYDVMFLTGTDEHGQKIERKAKEKGVTPKQYVDEIVAGIKE
LWKLLKITNDRFIRTTDPHHEKTVQKIFKKLYDQGDIYKSEYEGWYCTPCESFWTKTQLVDGKCPDCGREVELTKEESYF
FRLSKYQDRLIKHIEENPDFIQPVSRQNEMLNNFLRPGLEDLCVSRTTFDWGIPVSFDDKHVVYVWIDALSNYITALNYM
SEDDSDYRKYWPADVHLVGKEIVRFHTIIWPAMLMALGEPLPKQVFGHGWLLLEGGKMSKSKGNVVDPVVLVEKYGVDAI
RYFLLREVPFGSDGVFSNEALINRINSDLANDLGNLVSRTVAMIDKYFGGKLPQERQAGEFDDDLIKTVTDTPQKVEELL
DRLQFSTALTEIWKAISRTNKYIDETMPWALAKSEENKARLAAVLYNLAESIRIVSILIQPFMPETPEKIWHQLGINDKK
YVEWETAKKWGVYPEGAAVNKGEPLFPRIDVKKELEELEKLTLAAAENKEKQSPKQETEKKDAEKNEYITIEDFEKLDLR
VGKVLEAQKVENADKLLKLKIEVGNEVRQVVSGIAKYYSPEELKGKYVVLVANLKPVKLRGIESQGMILAASDDKDLVLV
TIDKEINSGTKVQ

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	SUPERFAMILY:SSF52374		-	1	348			1186345	140332	12	0	0	1	2178	0	1
2	PFAM:PF00133	IPR002300	tRNA synthetases class I (I, L, M and V)	2	133	48.5	4.0E-13	1186334	140332	720	0	0	1	2178	0	2
3	CDD:cd00814	IPR033911	MetRS_core	4	337			1186341	140332	1805	0	0	1	2178	0	3
4	PRINTS:PR01041	IPR033911	Methionyl-tRNA synthetase signature	7	21			1186321	140332	1797	0	0	1	2178	0	4
5	PRINTS:PR01041	IPR033911	Methionyl-tRNA synthetase signature	39	54			1186323	140332	1797	0	0	1	2178	0	5
6	PRINTS:PR01041	IPR033911	Methionyl-tRNA synthetase signature	87	99			1186325	140332	1797	0	0	1	2178	0	6
7	PFAM:PF09334	IPR015413	tRNA synthetases class I (M)	147	361	229.6	0	1186329	140332	1798	0	0	1	2178	0	7
8	PRINTS:PR01041	IPR033911	Methionyl-tRNA synthetase signature	223	235			1186324	140332	1797	0	0	1	2178	0	8
9	PRINTS:PR01041	IPR033911	Methionyl-tRNA synthetase signature	256	272			1186322	140332	1797	0	0	1	2178	0	9
10	CDD:cd07957	IPR041872	Anticodon_Ia_Met	345	475			1186342	140332	1807	0	0	1	2178	0	10
11	PRINTS:PR01041	IPR033911	Methionyl-tRNA synthetase signature	348	360			1186327	140332	1797	0	0	1	2178	0	11
12	SUPERFAMILY:SSF47323	IPR009080	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding	350	567			1186344	140332	726	0	0	1	2178	0	12
13	PFAM:PF19303	IPR041872	Anticodon binding domain of methionyl tRNA ligase	373	513	54.6	1.1E-14	1186337	140332	1803	0	0	1	2178	0	13
14	CDD:cd02800	IPR004495	tRNA_bind_EcMetRS_like	549	653			1186343	140332	1810	0	0	1	2178	0	14
15	SUPERFAMILY:SSF50249	IPR012340	Nucleic acid-binding, OB-fold	552	653			1186346	140332	405	0	0	1	2178	0	15
16	PROSITE_PROFILES:PS50886	IPR002547	tRNA-binding domain profile.	553	654			1186340	140332	1804	0	0	1	2178	0	16
17	PFAM:PF01588	IPR002547	Putative tRNA binding domain	559	652	107.4	3.0E-31	1186332	140332	1799	0	0	1	2178	0	17

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