Cellulosome Database Search

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Genome ifo

GCF_018127785.1: Prevotella scopos, JCM 17725 [-] (ncbi)

Genbanks info:

Genbank_acc: WP_025839983.1:EPBFLIGP_01425
Genome uid: 53
369387-369773 [+] (128)

Sequence:

ESSSNSKNNMNALIGNTLRIGVFTACLIALIGGIWYLVTSSDSTLPDYSEFHKGDISYTTFEGIFKSVLSFSAAGWVQLG
VIVLMLTPVMRVVLSLVDFSIQRDWLYVVITGIVLFIIIMNSLVGVG

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	0	20			1924629	153185	18	136:Membrane Protein	15	0	1	557	0	1
2	DeepTMHMM:inside		inside	1	17			1974957	153185	9730	15	0	1	557	0	2
3	PFAM:PF07843	IPR012861	Protein of unknown function (DUF1634)	14	121	102.8	8.9E-30	1924628	153185	6507	15	0	1	557	0	3
4	DeepTMHMM:TMhelix		TMhelix	18	38			1974958	153185	2056	141:DeepTMHMM: helix	15	0	1	557	5	4
5	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	20	39			1924631	153185	5	136:Membrane Protein	15	0	1	557	0	5
6	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	39	73			1924635	153185	3	136:Membrane Protein	15	0	1	557	0	6
7	DeepTMHMM:outside		outside	39	76			1974959	153185	10025	15	0	1	557	0	7
8	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	73	94			1924632	153185	5	136:Membrane Protein	15	0	1	557	0	8
9	DeepTMHMM:TMhelix		TMhelix	77	100			1974960	153185	2056	141:DeepTMHMM: helix	15	0	1	557	5	9
10	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	94	105			1924630	153185	18	136:Membrane Protein	15	0	1	557	0	10
11	DeepTMHMM:inside		inside	101	105			1974961	153185	9730	15	0	1	557	0	11
12	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	105	125			1924633	153185	5	136:Membrane Protein	15	0	1	557	0	12
13	DeepTMHMM:TMhelix		TMhelix	106	126			1974962	153185	2056	141:DeepTMHMM: helix	15	0	1	557	5	13
14	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	125	128			1924634	153185	3	136:Membrane Protein	15	0	1	557	0	14
15	DeepTMHMM:outside		outside	127	128			1974963	153185	10025	15	0	1	557	0	15

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