Cellulosome Database Search

This page is just for checking and is not meant to be part of the public site.

We will take the links to it out when ready.

Genome ifo

Batch1_genome_fasta/FD_YE_37_9_2: FD_YE_37_9_2, AnGL4 [-] (ncbi)

Genbanks info:

Genbank_acc: AnGL4_00364
Genome uid: 365
395411-397819 [+] (802)

Sequence:

STNYDFKQIEKKWRTYWSEHPINEPSEGKENYYCLDMFPYPSGSGLHVGHWRGYVLSDVWSRYKILQGYHVLHPMGWDAF
GLPAENYAITMGVHPAKSTEENVANFKKQLKEISAVYDWSKELNTTDPKFYKWTQWIFVKMFKEGLAYEKEMPINWCPSC
KTGLANEEVVNGECERCGSEVTKKNLRQWMLKITAYAERLLEDLDKLEWPDKVKKMQADWIGKSYGAEVDFKLEGHDETI
RVFTTRPDTLYGATFMVLAPEHGLVPELTSDEQKAAVEKYVFDASMKSNVDRMQDKEKTGVFTGSYAINPLNGEKLQVWI
SDYVLADYGTGAIMCVPAHDERDFAFAKTFNLPIVQVIAKDGIEVELEEAYTEVGVMINSGEFNGMASDETKEKVGDYLE
EKGIGTKTVNYKLRDWVFSRQRYWGEPIPIVHCPYCGIVPVPEEELPVVLPEVESYEPTGTGESPLAAIDEWVNTTCPAC
GKPAKRETNTMPQWAGSSWYFLRYVDVDNDNEIVAKEIAKKWLPVDMYVGGIEHAVLHLLYSRFYTKFLYDIGVVDFEEP
FKRLFNQGMICKNGAKMSKSKGNVVSPDELVENYGCDSLRMYELFVGPPELDSEWDDRGIEGVYRFMNKVWNLVAENIGK
TVERTKELEKLHHTLIYEVTDRLNKFNLNTTVSAFMEYTNKLSQYAREHDGVDQETLKDIARLLAPFTPHMAEELWSQLG
ETTSVFENGWPEYDTEKMKEDQITMPIQVNGKVRGTIQVSVDATKDEILEQVRAEIASKIEGKTVVKEIVVPKKIINIVV
K

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	SUPERFAMILY:SSF52374		-	4	625			2774463	1562418	12	0	0	0	364	0	1
2	CDD:cd00812		LeuRS_core	32	616			2774461	1562418	2710	0	0	0	364	0	2
3	PFAM:PF09334	IPR015413	tRNA synthetases class I (M)	38	183	74	9.6E-21	2774458	1562418	1798	0	0	0	364	0	3
4	PRINTS:PR00985	IPR002302	Leucyl-tRNA synthetase signature	125	143			2774450	1562418	2708	0	0	0	364	0	4
5	PRINTS:PR00985	IPR002302	Leucyl-tRNA synthetase signature	151	168			2774454	1562418	2708	0	0	0	364	0	5
6	PRINTS:PR00985	IPR002302	Leucyl-tRNA synthetase signature	183	197			2774451	1562418	2708	0	0	0	364	0	6
7	PRINTS:PR00985	IPR002302	Leucyl-tRNA synthetase signature	212	232			2774455	1562418	2708	0	0	0	364	0	7
8	PFAM:PF13603	IPR025709	Leucyl-tRNA synthetase, Domain 2	219	400	225.8	0	2774457	1562418	2709	0	0	0	364	0	8
9	SUPERFAMILY:SSF50677	IPR009008	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain	223	412			2774464	1562418	725	0	0	0	364	0	9
10	PFAM:PF00133	IPR002300	tRNA synthetases class I (I, L, M and V)	413	603	64.9	4.3E-18	2774459	1562418	720	0	0	0	364	0	10
11	PRINTS:PR00985	IPR002302	Leucyl-tRNA synthetase signature	486	505			2774449	1562418	2708	0	0	0	364	0	11
12	PRINTS:PR00985	IPR002302	Leucyl-tRNA synthetase signature	525	548			2774452	1562418	2708	0	0	0	364	0	12
13	PRINTS:PR00985	IPR002302	Leucyl-tRNA synthetase signature	558	569			2774453	1562418	2708	0	0	0	364	0	13
14	CDD:cd07958		Anticodon_Ia_Leu_BEm	615	720			2774460	1562418	2711	0	0	0	364	0	14
15	SUPERFAMILY:SSF47323	IPR009080	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding	618	802			2774462	1562418	726	0	0	0	364	0	15
16	PFAM:PF08264	IPR013155	Anticodon-binding domain of tRNA ligase	651	767	66.3	3.0E-18	2774456	1562418	722	0	0	0	364	0	16

↑ Top