Cellulosome Database Search

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Genome ifo

Batch1_genome_fasta/S_curvata: Syntrophomonas curvata, Scurva [+] (IMG)

Genbanks info:

Genbank_acc: Scurva_01851
Genome uid: 368
2065831-2066679 [+] (282)

Sequence:

GNGRIDLPDWMGTKEYADFGLEVKGSHSTGFLRKTLHELQKSLSSERLSEYYTRQDGLLQGIDPRIKLIAAVALILWVGL
VHNIGVLLGLWLLTLMLMYLSRLPVVNMQVKIWAFIPLITLLVAIPGMFNLINNGTPLLVVHHFSEPVYLWGYKLPPSIF
ISYQGARAALYLFLRVGISISLGVLLAVTTPVSRLLKSLHMLGVPALFVMIIEMTYRYLMLLLMLSLEMFEARKMRTVGK
ISLRRQQAQVGSSVGALFVKSMLMAEEVYQAMTARCYTGNS

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	0	68			2860747	1572066	18	136:Membrane Protein	0	0	0	1822	0	1
2	DeepTMHMM:inside		inside	1	61			2873406	1572066	9730	0	0	0	1822	0	2
3	PFAM:PF02361	IPR003339	Cobalt transport protein	59	280	120.3	8.8E-35	2860745	1572066	1090	0	0	0	1822	0	3
4	DeepTMHMM:TMhelix		TMhelix	62	82			2873407	1572066	2056	141:DeepTMHMM: helix	0	0	0	1822	6	4
5	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	68	101			2860751	1572066	5	136:Membrane Protein	0	0	0	1822	0	5
6	DeepTMHMM:outside		outside	83	84			2873408	1572066	10025	0	0	0	1822	0	6
7	DeepTMHMM:TMhelix		TMhelix	85	102			2873409	1572066	2056	141:DeepTMHMM: helix	0	0	0	1822	6	7
8	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	101	112			2860754	1572066	3	136:Membrane Protein	0	0	0	1822	0	8
9	DeepTMHMM:inside		inside	103	112			2873410	1572066	9730	0	0	0	1822	0	9
10	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	112	133			2860750	1572066	5	136:Membrane Protein	0	0	0	1822	0	10
11	DeepTMHMM:TMhelix		TMhelix	113	133			2873411	1572066	2056	141:DeepTMHMM: helix	0	0	0	1822	6	11
12	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	133	168			2860748	1572066	18	136:Membrane Protein	0	0	0	1822	0	12
13	DeepTMHMM:outside		outside	134	168			2873412	1572066	10025	0	0	0	1822	0	13
14	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	168	191			2860752	1572066	5	136:Membrane Protein	0	0	0	1822	0	14
15	DeepTMHMM:TMhelix		TMhelix	169	189			2873413	1572066	2056	141:DeepTMHMM: helix	0	0	0	1822	6	15
16	DeepTMHMM:inside		inside	190	282			2873414	1572066	9730	0	0	0	1822	0	16
17	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	191	202			2860753	1572066	3	136:Membrane Protein	0	0	0	1822	0	17
18	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	202	228			2860749	1572066	5	136:Membrane Protein	0	0	0	1822	0	18
19	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	228	282			2860746	1572066	18	136:Membrane Protein	0	0	0	1822	0	19

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