Cellulosome Database Search

This page is just for checking and is not meant to be part of the public site.

We will take the links to it out when ready.

Genome ifo

Batch2_genome_fasta/FD-LS-11-2: Paraclostridium benzoelyticum, AnGL27 [+] (ncbi)

Genbanks info:

Genbank_acc: AnGL27_01309
Genome uid: 374
873515-875935 [+] (806)

Sequence:

NVYKPNEVEAKWQKTWDQNHQYKTDTNDTTKPKYYTLEMLPYPSGKIHMGHVRNYSIGDVIARFKKMQGYNVLHPMGWDS
FGLPAENAAIKHGIHPHKWTMENIEDMKGQLKLLGLSYDWDREIATSTPEYYKFTQEIFLKFLEHGLAYKKKSFVNWCPS
CETVLANEQVVQGACERCDSVVVKKDLEQWYFKTTHFAEELLQDLDTLDGWPEKVKTMQRNWIGKSTGAEITFDIDGSDK
SVTVFTTRPDTVHGVSYMVLAPEHDLVKELVAGTEYEEAVEKFITKMYTMTEIERTSSDLEKEGMFIGKHVINPLNGQKV
ELWIANYVLVDYGTGAVMAVPAHDERDAEFAAKYNLNVVEVINEDNIMVNSGEFDGMEASKAFDAIIEKIEEMGIGKKTV
NYRLRDWLLSRQRYWGCPIPVVYCDECGLVPEKKENLPVLLPTDIEFTGKGESPLTTSKEFMNATCPCCGKSARREVDTM
DTFVDSSWYFLRYIDAQNTNEPFSKDVVNNWMPVDQYIGGVEHAIMHLLYARFFVKAFNEMGMLDFKEPFKNLLTQGMVL
KDGTKMSKSKGNVVSPLEIIDEYGADTARLFVLFAAPPERDLEWSEQGVEGCFRFLNRVYRLVDELADKAKCDATMGDLT
KEDKAMRFTINATLKKVTEDLNEKFGFNTAISALMELINEMYKYKELETRNDAVIKEAIETIVTIIAPFAPHIGEELWTM
IGKEESIFDISWPKYDESALVKDEVEVVVQINGKVRGKLSVAANISREDMQEAAMNDEKIKALVEGKTIVKVVAVPKKLV
NIVVK

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	SUPERFAMILY:SSF52374		-	2	615			3169646	1604196	12	0	0	0	1190	0	1
2	CDD:cd00812		LeuRS_core	33	605			3169643	1604196	2710	0	0	0	1190	0	2
3	PFAM:PF09334	IPR015413	tRNA synthetases class I (M)	40	181	91.3	5.2E-26	3169640	1604196	1798	0	0	0	1190	0	3
4	PRINTS:PR00985	IPR002302	Leucyl-tRNA synthetase signature	126	144			3169633	1604196	2708	0	0	0	1190	0	4
5	PRINTS:PR00985	IPR002302	Leucyl-tRNA synthetase signature	152	169			3169634	1604196	2708	0	0	0	1190	0	5
6	PRINTS:PR00985	IPR002302	Leucyl-tRNA synthetase signature	184	198			3169631	1604196	2708	0	0	0	1190	0	6
7	PRINTS:PR00985	IPR002302	Leucyl-tRNA synthetase signature	214	234			3169632	1604196	2708	0	0	0	1190	0	7
8	PFAM:PF13603	IPR025709	Leucyl-tRNA synthetase, Domain 2	220	391	213.1	0	3169638	1604196	2709	0	0	0	1190	0	8
9	SUPERFAMILY:SSF50677	IPR009008	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain	225	403			3169644	1604196	725	0	0	0	1190	0	9
10	PFAM:PF00133	IPR002300	tRNA synthetases class I (I, L, M and V)	404	606	88.5	3.1E-25	3169639	1604196	720	0	0	0	1190	0	10
11	PRINTS:PR00985	IPR002302	Leucyl-tRNA synthetase signature	475	494			3169637	1604196	2708	0	0	0	1190	0	11
12	PRINTS:PR00985	IPR002302	Leucyl-tRNA synthetase signature	514	537			3169635	1604196	2708	0	0	0	1190	0	12
13	PRINTS:PR00985	IPR002302	Leucyl-tRNA synthetase signature	547	558			3169636	1604196	2708	0	0	0	1190	0	13
14	CDD:cd07958		Anticodon_Ia_Leu_BEm	604	722			3169642	1604196	2711	0	0	0	1190	0	14
15	SUPERFAMILY:SSF47323	IPR009080	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding	608	806			3169645	1604196	726	0	0	0	1190	0	15
16	PFAM:PF08264	IPR013155	Anticodon-binding domain of tRNA ligase	643	765	84.3	8.4E-24	3169641	1604196	722	0	0	0	1190	0	16

↑ Top