Cellulosome Database Search

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Genome ifo

Batch2_genome_fasta/V.paradoxus: Variovorax paradoxus, 2u118 [-] (ncbi)

Genbanks info:

Genbank_acc: PaGL#32_03527
Genome uid: 381
3753879-3755876 [+] (665)

Sequence:

ATPPKTPPSSSSASSGYSEGSIRVLKGLEPVKQRPGMYTRTDNPLHIIQEVLDNAADEALAGHGKKIKVTLHADNSVSVE
DDGRGIPFGLHPEEKAPVVELVYTRLHAGGKFDKGSGGAYSFSGGLHGVGVSVTNALSKRLEVTTHREGSIARLAFSGGD
VIEPLEIRKLEAGERKQGTTVRAWPDAKYFETAALPMAELTHLLRSKAVLMPGVSVTLTVEKTKETQQWLYKGGLSDYLM
QTLNGDPVIPLFEGSGHADKNADNFAEGEGADWCVAFTEDGQPVRESYVNLIPTSAGGTHESGLRDGLFTAVKGFIELHS
LLPKGVKLLPEDVFARASYVLSAKVLDPQFQGQIKERLNSRDAVRLVSSFVRPALELWLNQHVDYGRKLAELAIKAAQTR
QRAGQKVEKRKGSGVAVLPGKLTDCESKDISHNEVFLVEGDSAGGSAKMGRDKESQAILPLRGKVLNTWEVERDRLFANT
EIHDISVAVGVDPHGPADTPDMSGLRYGKICILSDADVDGSHIQVLLLTLFFRHFPKLIEAGHVYVAKPPLFRVDAPARG
KKPASKVYALDEGELTATLDKLRKDGVREGAWSISRFKGLGEMSAEQLWETTLNPDTRRLMKVQLGRFDFSSTQGEITKL
MGKGEAAARRELMELRADDVDIDV

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	SUPERFAMILY:SSF55874	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	17	232			3710880	1648692	122	0	0	0	4733	0	1
2	PRINTS:PR01098	IPR005737	Topoisomerase IV subunit B signature	38	52			3710857	1648692	10799	0	0	0	4733	0	2
3	SMART:SM00387	IPR003594		39	190			3710871	1648692	1	0	0	0	4733	0	3
4	PRINTS:PR00418		DNA topoisomerase II family signature	43	59			3710863	1648692	1538	0	0	0	4733	0	4
5	SMART:SM00433	IPR001241		45	659			3710870	1648692	1	0	0	0	4733	0	5
6	PFAM:PF02518	IPR003594	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	45	188	61.1	1.3E-16	3710875	1648692	99	0	0	0	4733	0	6
7	CDD:cd16928		HATPase_GyrB-like	46	230			3710877	1648692	1544	0	0	0	4733	0	7
8	PRINTS:PR00418		DNA topoisomerase II family signature	78	92			3710869	1648692	1538	0	0	0	4733	0	8
9	PRINTS:PR00418		DNA topoisomerase II family signature	124	139			3710868	1648692	1538	0	0	0	4733	0	9
10	PRINTS:PR01098	IPR005737	Topoisomerase IV subunit B signature	150	165			3710855	1648692	10799	0	0	0	4733	0	10
11	PRINTS:PR01098	IPR005737	Topoisomerase IV subunit B signature	190	208			3710858	1648692	10799	0	0	0	4733	0	11
12	PRINTS:PR01098	IPR005737	Topoisomerase IV subunit B signature	208	230			3710856	1648692	10799	0	0	0	4733	0	12
13	CDD:cd00822		TopoII_Trans_DNA_gyrase	233	410			3710878	1648692	1542	0	0	0	4733	0	13
14	PFAM:PF00204	IPR013506	DNA gyrase B	234	407	115.3	1.9E-33	3710872	1648692	1541	0	0	0	4733	0	14
15	SUPERFAMILY:SSF54211	IPR020568	Ribosomal protein S5 domain 2-type fold	234	409			3710881	1648692	156	0	0	0	4733	0	15
16	PRINTS:PR00418		DNA topoisomerase II family signature	287	301			3710861	1648692	1538	0	0	0	4733	0	16
17	PRINTS:PR01098	IPR005737	Topoisomerase IV subunit B signature	315	332			3710860	1648692	10799	0	0	0	4733	0	17
18	PRINTS:PR01098	IPR005737	Topoisomerase IV subunit B signature	332	348			3710852	1648692	10799	0	0	0	4733	0	18
19	PRINTS:PR01098	IPR005737	Topoisomerase IV subunit B signature	359	383			3710859	1648692	10799	0	0	0	4733	0	19
20	PRINTS:PR01098	IPR005737	Topoisomerase IV subunit B signature	383	409			3710853	1648692	10799	0	0	0	4733	0	20
21	SUPERFAMILY:SSF56719	IPR013760	DNA topoisomerase, type IIA-like domain superfamily	411	659			3710879	1648692	261	0	0	0	4733	0	21
22	PROSITE_PROFILES:PS50880	IPR006171	Toprim domain profile.	433	551			3710876	1648692	1459	0	0	0	4733	0	22
23	PFAM:PF01751	IPR006171	Toprim domain	434	549	41.9	9.3E-11	3710874	1648692	1007	0	0	0	4733	0	23
24	PRINTS:PR00418		DNA topoisomerase II family signature	435	450			3710865	1648692	1538	0	0	0	4733	0	24
25	PRINTS:PR01098	IPR005737	Topoisomerase IV subunit B signature	469	491			3710854	1648692	10799	0	0	0	4733	0	25
26	PRINTS:PR00418		DNA topoisomerase II family signature	504	521			3710864	1648692	1538	0	0	0	4733	0	26
27	PRINTS:PR00418		DNA topoisomerase II family signature	522	540			3710866	1648692	1538	0	0	0	4733	0	27
28	PRINTS:PR00418		DNA topoisomerase II family signature	542	555			3710862	1648692	1538	0	0	0	4733	0	28
29	PFAM:PF00986	IPR002288	DNA gyrase B subunit, carboxyl terminus	590	655	73.9	8.4E-21	3710873	1648692	1540	0	0	0	4733	0	29
30	PRINTS:PR00418		DNA topoisomerase II family signature	594	611			3710867	1648692	1538	0	0	0	4733	0	30

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