Cellulosome Database Search

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Genome ifo

Batch4_genome_fasta/bc2015: Methylorubrum populi, CTY4 [-] (ncbi)

Genbanks info:

Genbank_acc: PaGL#39_04252
Genome uid: 394
4564302-4566065 [+] (587)

Sequence:

RMRNQFLAAVGLAALSVGLALPAIAEVTEQDILNDAKTPEDVVTYGLGPQAQRFSSLKTLNRENIKGLVPAWSFSFGGEK
QRGQESQALVKDGVLYVTGSYSRLYAVDARTGEKKWEYNARLPEGILPCCDVVNRGAALYKDKVYFGTLDAKLVALDQKT
GKVVWRKDIDDFKSGYSYTAAPMIVKGKIITGVSGGEFGVVGRVEARDAETGEIVWKRPVIEGHMGELNGKPSTMTGKTN
ETWPGDTWKFGGGATWLGGTYDPELNLIYFGTGNPGPWNSALRPGDNKWSASRLAINPDNGEIVWGFQTTPHDGWDYDGV
NEFVPFDMQKDGKTVKAGATADRNGFFYVLDRTNGAFLSATPFVSNINWAKGIDENGRPIYDEANRPGDPAKSEDGKKGK
SVYATPGFLGGKNWNPIAYSPDTKLFYVPSNEWGMDIWNEPVNYKKGAAYLGAGFTIKPTFEDHIGSLKAIDPATKKVVW
EYKNKAPLWAGVLTTAGNLVFTGTPEGFLKAFDAKTGEEVWKFQVGTGVVASPITWEQDGEQWIGVAAGWGGAVPLWGGE
VAKTTAGINQGGSFWAFRLPKALASR

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:SIGNAL_PEPTIDE		Signal peptide region	0	26			4260466	1697314	19	135:all secretion /signal peptide, lipo	0	0	0	4211	3	1
2	PHOBIUS:SIGNAL_PEPTIDE_N_REGION		N-terminal region of a signal peptide.	0	6			4260467	1697314	21	135:all secretion /signal peptide, lipo	0	0	0	4211	3	2
3	PHOBIUS:SIGNAL_PEPTIDE_H_REGION		Hydrophobic region of a signal peptide.	6	22			4260465	1697314	24	135:all secretion /signal peptide, lipo	0	0	0	4211	3	3
4	PHOBIUS:SIGNAL_PEPTIDE_C_REGION		C-terminal region of a signal peptide.	22	26			4260468	1697314	26	135:all secretion /signal peptide, lipo	0	0	0	4211	3	4
5	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	26	587			4260469	1697314	3	136:Membrane Protein	0	0	0	4211	0	5
6	SIGNALP6:SP		SP	26	27	0		4261217	1697314	1978	135:all secretion /signal peptide, lipo	0	0	0	4211	3	6
7	CDD:cd10277	IPR034119	PQQ_ADH_I	32	580			4260470	1697314	10251	0	0	0	4211	0	7
8	SUPERFAMILY:SSF50998	IPR011047	Quinoprotein alcohol dehydrogenase-like superfamily	33	576			4260471	1697314	1077	0	0	0	4211	0	8
9	PFAM:PF13360	IPR002372	PQQ-like domain	72	227	58.7	6.6E-16	4260463	1697314	3967	0	0	0	4211	0	9
10	SMART:SM00564	IPR018391		87	120			4260461	1697314	1	0	0	0	4211	0	10
11	SMART:SM00564	IPR018391		137	169			4260459	1697314	1	0	0	0	4211	0	11
12	SMART:SM00564	IPR018391		182	220			4260458	1697314	1	0	0	0	4211	0	12
13	SMART:SM00564	IPR018391		333	363			4260457	1697314	1	0	0	0	4211	0	13
14	SMART:SM00564	IPR018391		441	484			4260460	1697314	1	0	0	0	4211	0	14
15	SMART:SM00564	IPR018391		492	525			4260462	1697314	1	0	0	0	4211	0	15
16	PFAM:PF01011	IPR002372	PQQ enzyme repeat	498	535	35.6	4.7E-9	4260464	1697314	5764	0	0	0	4211	0	16

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