Cellulosome Database Search

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Genome ifo

Batch4_genome_fasta/bc2029: Methanospirillum stamsii, Pt1 [-] (IMG)

Genbanks info:

Genbank_acc: MLKi8_00858
Genome uid: 397
896982-897647 [+] (221)

Sequence:

FEMITRLLDFFIHLDDYLPGLVETYGNLVYGILFVIIFCETGLVITPFLPGDSLLFVTGTIAGMGILNIGILLGVLYIAA
ILGDSVNYFIGRYVGHKIIDMNLPMIRKEHLDKTHLYFEKYGSITIVIARFAPFVRTFAPFLAGMGKMQYRTFLAYNISG
GILWVSIFLLAGYFLGGIPIVKENMSLVALAIILISLIAVGSVLIEICRFFGSCVLKKVR

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	0	28			4397517	1714436	3	136:Membrane Protein	0	0	0	856	0	1
2	DeepTMHMM:outside		outside	1	28			4421748	1714436	10025	0	0	0	856	0	2
3	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	28	50			4397513	1714436	5	136:Membrane Protein	0	0	0	856	0	3
4	DeepTMHMM:TMhelix		TMhelix	29	40			4421749	1714436	2056	141:DeepTMHMM: helix	0	0	0	856	6	4
5	DeepTMHMM:inside		inside	41	41			4421750	1714436	9730	0	0	0	856	0	5
6	DeepTMHMM:TMhelix		TMhelix	42	62			4421751	1714436	2056	141:DeepTMHMM: helix	0	0	0	856	6	6
7	PFAM:PF09335	IPR032816	SNARE associated Golgi protein	49	175	78.2	6.6E-22	4397510	1714436	5411	0	0	0	856	0	7
8	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	50	61			4397519	1714436	18	136:Membrane Protein	0	0	0	856	0	8
9	SUPERFAMILY:SSF56801		-	59	609			4137059	1714436	12	0	0	0	856	0	9
10	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	61	83			4397511	1714436	5	136:Membrane Protein	0	0	0	856	0	10
11	DeepTMHMM:outside		outside	63	71			4421752	1714436	10025	0	0	0	856	0	11
12	DeepTMHMM:TMhelix		TMhelix	72	92			4421753	1714436	2056	141:DeepTMHMM: helix	0	0	0	856	6	12
13	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	83	121			4397518	1714436	3	136:Membrane Protein	0	0	0	856	0	13
14	DeepTMHMM:inside		inside	93	154			4421754	1714436	9730	0	0	0	856	0	14
15	PFAM:PF00501	IPR000873	AMP-binding enzyme	94	510	274.9	0	4137057	1714436	69	0	0	0	856	0	15
16	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	121	143			4397512	1714436	5	136:Membrane Protein	0	0	0	856	0	16
17	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	143	154			4397521	1714436	18	136:Membrane Protein	0	0	0	856	0	17
18	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	154	176			4397515	1714436	5	136:Membrane Protein	0	0	0	856	0	18
19	DeepTMHMM:TMhelix		TMhelix	155	176			4421755	1714436	2056	141:DeepTMHMM: helix	0	0	0	856	6	19
20	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	176	187			4397516	1714436	3	136:Membrane Protein	0	0	0	856	0	20
21	DeepTMHMM:outside		outside	177	187			4421756	1714436	10025	0	0	0	856	0	21
22	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	187	212			4397514	1714436	5	136:Membrane Protein	0	0	0	856	0	22
23	DeepTMHMM:TMhelix		TMhelix	188	206			4421757	1714436	2056	141:DeepTMHMM: helix	0	0	0	856	6	23
24	DeepTMHMM:inside		inside	207	221			4421758	1714436	9730	0	0	0	856	0	24
25	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	212	221			4397520	1714436	18	136:Membrane Protein	0	0	0	856	0	25
26	PFAM:PF13193	IPR025110	AMP-binding enzyme C-terminal domain	518	597	78.6	5.2E-22	4137058	1714436	70	0	0	0	856	0	26

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