Cellulosome Database Search

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Genome ifo

Batch4_genome_fasta/bc2029: Methanospirillum stamsii, Pt1 [-] (IMG)

Genbanks info:

Genbank_acc: MLKi8_02292
Genome uid: 397
2326928-2328199 [+] (423)

Sequence:

TPDEYCDLSRYEMADLYLDLAKTLYEAGATVQRVTDSVRWLAGELGDTNVHIFVGYETIELSILHHDHIESRLYVIREPF
KVNIAVLHQVSLLLHRIASYQGDICAIRAEILRIQNGKPIYPPLLIFFLTSIACASFGWLNHADISSLFIIGISTFCALS
IKFRYGKRLNNIYLSTLVTAFTGGLFAAILSRIIPTTTPEVALISSVLFLIPGFLLIDGGLDIIRDHTSCGIVRLVSAST
HICIISGSLLIPLGLLGTVVHANETTPDLLFSILTMSIAAGIAASGFALLFNTPLFVLPGCILCGMAGRMAREIGALFGL
DTFFCIFFGMVVATIIAAYYGRLTHVPGVFIAVIAGITMIPGLAMIKGLHGLFAIAHTGTILSETMVMYSLQQCLYAGVV
AFILIAGIIIPSLVIYRTTPRV

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	0	120			4399991	1715828	18	136:Membrane Protein	0	0	0	2248	0	1
2	DeepTMHMM:inside		inside	1	124			4418076	1715828	9730	0	0	0	2248	0	2
3	PROSITE_PROFILES:PS51918	IPR007197	Radical SAM core domain profile.	2	215			4144302	1715828	190	0	0	0	2248	0	3
4	SUPERFAMILY:SSF102114		-	4	317			4144305	1715828	12	0	0	0	2248	0	4
5	PFAM:PF04055	IPR007197	Radical SAM superfamily	10	170	42.8	7.0E-11	4144300	1715828	48	0	0	0	2248	0	5
6	CDD:cd01335		Radical_SAM	10	172			4144304	1715828	258	0	0	0	2248	0	6
7	PFAM:PF06738	IPR010619	Putative threonine/serine exporter	16	251	128.8	2.0E-37	4399971	1715828	3479	0	0	0	2248	0	7
8	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	120	140			4399973	1715828	5	136:Membrane Protein	0	0	0	2248	0	8
9	DeepTMHMM:TMhelix		TMhelix	125	140			4418077	1715828	2056	141:DeepTMHMM: helix	0	0	0	2248	6	9
10	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	140	145			4399987	1715828	3	136:Membrane Protein	0	0	0	2248	0	10
11	DeepTMHMM:outside		outside	141	147			4418078	1715828	10025	0	0	0	2248	0	11
12	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	145	166			4399977	1715828	5	136:Membrane Protein	0	0	0	2248	0	12
13	DeepTMHMM:TMhelix		TMhelix	148	164			4418079	1715828	2056	141:DeepTMHMM: helix	0	0	0	2248	6	13
14	DeepTMHMM:inside		inside	165	174			4418080	1715828	9730	0	0	0	2248	0	14
15	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	166	172			4399990	1715828	18	136:Membrane Protein	0	0	0	2248	0	15
16	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	172	196			4399981	1715828	5	136:Membrane Protein	0	0	0	2248	0	16
17	DeepTMHMM:TMhelix		TMhelix	175	195			4418081	1715828	2056	141:DeepTMHMM: helix	0	0	0	2248	6	17
18	DeepTMHMM:outside		outside	196	203			4418082	1715828	10025	0	0	0	2248	0	18
19	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	196	201			4399986	1715828	3	136:Membrane Protein	0	0	0	2248	0	19
20	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	201	222			4399976	1715828	5	136:Membrane Protein	0	0	0	2248	0	20
21	DeepTMHMM:TMhelix		TMhelix	204	218			4418083	1715828	2056	141:DeepTMHMM: helix	0	0	0	2248	6	21
22	DeepTMHMM:inside		inside	219	231			4418084	1715828	9730	0	0	0	2248	0	22
23	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	222	233			4399988	1715828	18	136:Membrane Protein	0	0	0	2248	0	23
24	DeepTMHMM:TMhelix		TMhelix	232	252			4418085	1715828	2056	141:DeepTMHMM: helix	0	0	0	2248	6	24
25	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	233	258			4399974	1715828	5	136:Membrane Protein	0	0	0	2248	0	25
26	PFAM:PF13186	IPR023885	Iron-sulfur cluster-binding domain	245	307	28.7	1.3E-6	4144301	1715828	2081	0	0	0	2248	0	26
27	DeepTMHMM:outside		outside	253	270			4418086	1715828	10025	0	0	0	2248	0	27
28	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	258	269			4399984	1715828	3	136:Membrane Protein	0	0	0	2248	0	28
29	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	269	303			4399978	1715828	5	136:Membrane Protein	0	0	0	2248	0	29
30	DeepTMHMM:TMhelix		TMhelix	271	292			4418087	1715828	2056	141:DeepTMHMM: helix	0	0	0	2248	6	30
31	PFAM:PF12821	IPR024528	Threonine/Serine exporter, ThrE	278	414	43.6	2.8E-11	4399972	1715828	2759	0	0	0	2248	0	31
32	DeepTMHMM:inside		inside	293	295			4418088	1715828	9730	0	0	0	2248	0	32
33	PROSITE_PROFILES:PS51379	IPR017896	4Fe-4S ferredoxin-type iron-sulfur binding domain profile.	295	327			4144303	1715828	180	0	0	0	2248	0	33
34	DeepTMHMM:TMhelix		TMhelix	296	316			4418089	1715828	2056	141:DeepTMHMM: helix	0	0	0	2248	6	34
35	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	303	314			4399989	1715828	18	136:Membrane Protein	0	0	0	2248	0	35
36	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	314	341			4399980	1715828	5	136:Membrane Protein	0	0	0	2248	0	36
37	DeepTMHMM:outside		outside	317	322			4418090	1715828	10025	0	0	0	2248	0	37
38	DeepTMHMM:TMhelix		TMhelix	323	342			4418091	1715828	2056	141:DeepTMHMM: helix	0	0	0	2248	6	38
39	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	341	346			4399985	1715828	3	136:Membrane Protein	0	0	0	2248	0	39
40	DeepTMHMM:inside		inside	343	350			4418092	1715828	9730	0	0	0	2248	0	40
41	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	346	365			4399982	1715828	5	136:Membrane Protein	0	0	0	2248	0	41
42	DeepTMHMM:TMhelix		TMhelix	351	370			4418093	1715828	2056	141:DeepTMHMM: helix	0	0	0	2248	6	42
43	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	365	371			4399993	1715828	18	136:Membrane Protein	0	0	0	2248	0	43
44	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	371	390			4399975	1715828	5	136:Membrane Protein	0	0	0	2248	0	44
45	DeepTMHMM:outside		outside	371	395			4418094	1715828	10025	0	0	0	2248	0	45
46	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	390	395			4399983	1715828	3	136:Membrane Protein	0	0	0	2248	0	46
47	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	395	417			4399979	1715828	5	136:Membrane Protein	0	0	0	2248	0	47
48	DeepTMHMM:TMhelix		TMhelix	396	416			4418095	1715828	2056	141:DeepTMHMM: helix	0	0	0	2248	6	48
49	DeepTMHMM:inside		inside	417	423			4418096	1715828	9730	0	0	0	2248	0	49
50	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	417	423			4399992	1715828	18	136:Membrane Protein	0	0	0	2248	0	50

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