Cellulosome Database Search

This page is just for checking and is not meant to be part of the public site.

We will take the links to it out when ready.

Genome ifo

Batch4_genome_fasta/bc2034: Peribacillus frigoritolerans, 30N-5 [+] (ncbi)

Genbanks info:

Genbank_acc: PaGL#67_00910
Genome uid: 400
886722-889136 [+] (804)

Sequence:

SFDHRSIETKWQKYWEGNKTFKTGEDSGKRKFYALDMFPYPSGAGLHVGHPEGYTASDILARMKRAQGYNVLHPIGWDAF
GLPAEQYAIDTGNDPAEFTEHNINTFRRQIKALGFSYDWDREINTTDPDYYKWTQWIFLKLYEKGLAYIDEVAVNWCPAL
GTVLANEEVIDGKSERGGHPVERRPMKQWMLRITAYADRLIDDLNDVDWPENIKDMQRNWIGRSEGAEVTFNIDGFDETF
TVFTTRPDTLFGATYAVLAPEHPFVDKITTADQSAAVEAYLDEVKHKSDLERTDLAKDKSGVFTGAYAINPVNGEKMPIW
IADYVLISYGTGAIMAVPAHDERDYEFAVKFDLPIKEVVAGGDVTSEAYTGDGLHVNSEFLDGLNKEDAISTMIKWLEEK
EIGTKKITYRLRDWLFSRQRYWGEPIPIIHWEDGTMSPVKEEELPLILPKTTDIKPSGTGESPLANISEWVNVTDENGRK
GRRETNTMPQWAGSSWYFLRYIDPDNKEALADPEKLKEWMPVDIYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQN
LFNQGMILGENNEKMSKSKGNVVNPDDIVESHGADTLRMYEMFMGPLDASIAWSTNGLDGSRRFLDRIWRLLVNDDGTIT
DKMTETDDTGKLEKVYHQTVKKVTENYEELKFNTAISQLMVFINDAYKADSLPKVYIEGFVKLLAPVAPHIAEELWSKLG
HSESITYGTWPAFDEAKLVDNEVEIVIQINGKVKAKLMVPTDTTREKLEEIAMGDDSIKEQIDGKTIRKVIAVPGKLVNI
VAN

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	SUPERFAMILY:SSF52374		-	2	623			4558161	1726698	12	0	0	0	833	0	1
2	CDD:cd00812		LeuRS_core	31	614			4558157	1726698	2710	0	0	0	833	0	2
3	PFAM:PF09334	IPR015413	tRNA synthetases class I (M)	38	170	63.1	1.9E-17	4558153	1726698	1798	0	0	0	833	0	3
4	PRINTS:PR00985	IPR002302	Leucyl-tRNA synthetase signature	125	143			4558150	1726698	2708	0	0	0	833	0	4
5	PRINTS:PR00985	IPR002302	Leucyl-tRNA synthetase signature	151	168			4558146	1726698	2708	0	0	0	833	0	5
6	PRINTS:PR00985	IPR002302	Leucyl-tRNA synthetase signature	183	197			4558149	1726698	2708	0	0	0	833	0	6
7	PRINTS:PR00985	IPR002302	Leucyl-tRNA synthetase signature	212	232			4558148	1726698	2708	0	0	0	833	0	7
8	PFAM:PF13603	IPR025709	Leucyl-tRNA synthetase, Domain 2	218	399	225.9	0	4558155	1726698	2709	0	0	0	833	0	8
9	SUPERFAMILY:SSF50677	IPR009008	Valyl/Leucyl/Isoleucyl-tRNA synthetase, editing domain	223	410			4558159	1726698	725	0	0	0	833	0	9
10	PFAM:PF00133	IPR002300	tRNA synthetases class I (I, L, M and V)	411	603	73.3	1.2E-20	4558154	1726698	720	0	0	0	833	0	10
11	PRINTS:PR00985	IPR002302	Leucyl-tRNA synthetase signature	483	502			4558147	1726698	2708	0	0	0	833	0	11
12	PRINTS:PR00985	IPR002302	Leucyl-tRNA synthetase signature	522	545			4558152	1726698	2708	0	0	0	833	0	12
13	PRINTS:PR00985	IPR002302	Leucyl-tRNA synthetase signature	555	566			4558151	1726698	2708	0	0	0	833	0	13
14	CDD:cd07958		Anticodon_Ia_Leu_BEm	613	720			4558158	1726698	2711	0	0	0	833	0	14
15	SUPERFAMILY:SSF47323	IPR009080	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding	616	803			4558160	1726698	726	0	0	0	833	0	15
16	PFAM:PF08264	IPR013155	Anticodon-binding domain of tRNA ligase	654	766	75.5	4.4E-21	4558156	1726698	722	0	0	0	833	0	16

↑ Top