Cellulosome Database Search

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Genome ifo

Batch4_genome_fasta/bc2034: Peribacillus frigoritolerans, 30N-5 [+] (ncbi)

Genbanks info:

Genbank_acc: PaGL#67_04224
Genome uid: 400
4300511-4301458 [+] (315)

Sequence:

NIGNIFLTLIPIFFTIIIGYLGGYFKVFNSESSKGLNTLVTKFALPAHLFIGITTTSKQTLINQWSFFLTMTIGVIGFYI
ILLIVARLVFKFDLTKASMFSLNATQPAFAFMGISVLGSLFGAQEIAIPIAITGIVVNALLDPLATIVGTVGQSGLGKSK
DEKTNILGIVLHGLSEPLACIPLLAVVLTLLGFQAPDIIKNALDQIGSVTSGVALFAVGVTVGIRKISLRPIAFGISILK
VVAIPLYMILVAHLIGLDHADTIKAILLVSFPGSAVAAMISTRFDSLSTETASSFVISTILSLITLPIYISLLM

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	0	5			4539087	1730008	3	136:Membrane Protein	0	0	0	4143	0	1
2	DeepTMHMM:outside		outside	1	5			4570796	1730008	10025	0	0	0	4143	0	2
3	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	5	24			4539092	1730008	5	136:Membrane Protein	0	0	0	4143	0	3
4	DeepTMHMM:TMhelix		TMhelix	6	24			4570797	1730008	2056	141:DeepTMHMM: helix	0	0	0	4143	6	4
5	PFAM:PF03547	IPR004776	Membrane transport protein	6	156	73.4	1.1E-20	4539082	1730008	1369	136:Membrane Protein	0	0	0	4143	0	5
6	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	24	35			4539101	1730008	18	136:Membrane Protein	0	0	0	4143	0	6
7	DeepTMHMM:inside		inside	25	36			4570798	1730008	9730	0	0	0	4143	0	7
8	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	35	54			4539098	1730008	5	136:Membrane Protein	0	0	0	4143	0	8
9	DeepTMHMM:TMhelix		TMhelix	37	55			4570799	1730008	2056	141:DeepTMHMM: helix	0	0	0	4143	6	9
10	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	54	65			4539084	1730008	3	136:Membrane Protein	0	0	0	4143	0	10
11	DeepTMHMM:outside		outside	56	67			4570800	1730008	10025	0	0	0	4143	0	11
12	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	65	91			4539091	1730008	5	136:Membrane Protein	0	0	0	4143	0	12
13	DeepTMHMM:TMhelix		TMhelix	68	91			4570801	1730008	2056	141:DeepTMHMM: helix	0	0	0	4143	6	13
14	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	91	102			4539102	1730008	18	136:Membrane Protein	0	0	0	4143	0	14
15	DeepTMHMM:inside		inside	92	102			4570802	1730008	9730	0	0	0	4143	0	15
16	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	102	122			4539096	1730008	5	136:Membrane Protein	0	0	0	4143	0	16
17	DeepTMHMM:TMhelix		TMhelix	103	115			4570803	1730008	2056	141:DeepTMHMM: helix	0	0	0	4143	6	17
18	DeepTMHMM:outside		outside	116	128			4570804	1730008	10025	0	0	0	4143	0	18
19	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	122	127			4539089	1730008	3	136:Membrane Protein	0	0	0	4143	0	19
20	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	127	149			4539090	1730008	5	136:Membrane Protein	0	0	0	4143	0	20
21	DeepTMHMM:TMhelix		TMhelix	129	146			4570805	1730008	2056	141:DeepTMHMM: helix	0	0	0	4143	6	21
22	DeepTMHMM:inside		inside	147	178			4570806	1730008	9730	0	0	0	4143	0	22
23	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	149	169			4539100	1730008	18	136:Membrane Protein	0	0	0	4143	0	23
24	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	169	194			4539095	1730008	5	136:Membrane Protein	0	0	0	4143	0	24
25	PFAM:PF03547	IPR004776	Membrane transport protein	171	311	60.4	9.9E-17	4539083	1730008	1369	136:Membrane Protein	0	0	0	4143	0	25
26	DeepTMHMM:TMhelix		TMhelix	179	192			4570807	1730008	2056	141:DeepTMHMM: helix	0	0	0	4143	6	26
27	DeepTMHMM:outside		outside	193	202			4570808	1730008	10025	0	0	0	4143	0	27
28	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	194	205			4539088	1730008	3	136:Membrane Protein	0	0	0	4143	0	28
29	DeepTMHMM:TMhelix		TMhelix	203	220			4570809	1730008	2056	141:DeepTMHMM: helix	0	0	0	4143	6	29
30	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	205	225			4539094	1730008	5	136:Membrane Protein	0	0	0	4143	0	30
31	DeepTMHMM:inside		inside	221	234			4570810	1730008	9730	0	0	0	4143	0	31
32	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	225	231			4539103	1730008	18	136:Membrane Protein	0	0	0	4143	0	32
33	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	231	257			4539093	1730008	5	136:Membrane Protein	0	0	0	4143	0	33
34	DeepTMHMM:TMhelix		TMhelix	235	256			4570811	1730008	2056	141:DeepTMHMM: helix	0	0	0	4143	6	34
35	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	257	262			4539085	1730008	3	136:Membrane Protein	0	0	0	4143	0	35
36	DeepTMHMM:outside		outside	257	265			4570812	1730008	10025	0	0	0	4143	0	36
37	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	262	281			4539097	1730008	5	136:Membrane Protein	0	0	0	4143	0	37
38	DeepTMHMM:TMhelix		TMhelix	266	275			4570813	1730008	2056	141:DeepTMHMM: helix	0	0	0	4143	6	38
39	DeepTMHMM:inside		inside	276	295			4570814	1730008	9730	0	0	0	4143	0	39
40	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	281	292			4539104	1730008	18	136:Membrane Protein	0	0	0	4143	0	40
41	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	292	313			4539099	1730008	5	136:Membrane Protein	0	0	0	4143	0	41
42	DeepTMHMM:TMhelix		TMhelix	296	311			4570815	1730008	2056	141:DeepTMHMM: helix	0	0	0	4143	6	42
43	DeepTMHMM:outside		outside	312	315			4570816	1730008	10025	0	0	0	4143	0	43
44	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	313	315			4539086	1730008	3	136:Membrane Protein	0	0	0	4143	0	44

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