Cellulosome Database Search

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Genome ifo

Batch4_genome_fasta/bc2035: Micromonospora inositola, Utrum1 [+] (ncbi)

Genbanks info:

Genbank_acc: PaGL#61_02954
Genome uid: 401
3129132-3130769 [+] (545)

Sequence:

SAPTATADAEPMNRRQTLEALSGLLLVLFVAMLSSTVVSTALPKIIGALNGSQTQYTWVVTATLLTATATTPIWGKLADL
FNKKLLIQVAIVVFLAGSVAAGFAHSAGQLIAARAFQGIGVGGLQALVQVAIAAMIPPRERGRYNGYLGGVMALATVGGP
LLGGLIVDTSWLGWRWCFFVGAPVAIVALILLQMTLHLPTARRDNVKIDYLGATLIAAGVSLLLIWISFVDDSFAWLSWQ
TGAMVGGSLLLLALAVLVESRAAEPVVPLEIVRERTTALAILGSLAVGMAMFGGAVFLGQYFQIGRGYSPTEAGLLTIPM
MAGVLLSSIVAGRLITASGKIKPYIVAGSIILVAGFALLGTIDHETSLVLVGAAMFIVGVGVGMTMQNLVLAVQNTVALK
DIGAASSSVAFFRSLGGTIGVSVLGAVLARQVTDRITHDLAAAGIPTTGGGSSTLNLAALPAPVQHIVRAAYGDATGHIF
LISAAIAVVGILAALLLKPINLRSSLDLPDTARSVAVAADAVDGAPAFDEVAVDVTGPGERARR

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	0	20			4588105	1736961	18	136:Membrane Protein	0	0	0	2905	0	1
2	DeepTMHMM:inside		inside	1	21			4639818	1736961	9730	0	0	0	2905	0	2
3	SUPERFAMILY:SSF103473	IPR036259	MFS transporter superfamily	10	506			4588130	1736961	940	0	0	0	2905	0	3
4	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	20	44			4588108	1736961	5	136:Membrane Protein	0	0	0	2905	0	4
5	PROSITE_PROFILES:PS50850	IPR020846	Major facilitator superfamily (MFS) profile.	20	503			4588128	1736961	938	0	0	0	2905	0	5
6	DeepTMHMM:TMhelix		TMhelix	22	42			4639819	1736961	2056	141:DeepTMHMM: helix	0	0	0	2905	6	6
7	PRINTS:PR01036		Tetracycline resistance protein TetB signature	23	48			4588094	1736961	4422	0	0	0	2905	0	7
8	PFAM:PF07690	IPR011701	Major Facilitator Superfamily	24	421	156.4	1.4013E-45	4588098	1736961	937	0	0	0	2905	0	8
9	CDD:cd17502		MFS_Azr1_MDR_like	24	424			4588129	1736961	4091	0	0	0	2905	0	9
10	DeepTMHMM:outside		outside	43	57			4639820	1736961	10025	0	0	0	2905	0	10
11	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	44	55			4588123	1736961	3	136:Membrane Protein	0	0	0	2905	0	11
12	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	55	74			4588111	1736961	5	136:Membrane Protein	0	0	0	2905	0	12
13	DeepTMHMM:TMhelix		TMhelix	58	76			4639821	1736961	2056	141:DeepTMHMM: helix	0	0	0	2905	6	13
14	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	74	85			4588104	1736961	18	136:Membrane Protein	0	0	0	2905	0	14
15	DeepTMHMM:inside		inside	77	85			4639822	1736961	9730	0	0	0	2905	0	15
16	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	85	106			4588120	1736961	5	136:Membrane Protein	0	0	0	2905	0	16
17	DeepTMHMM:TMhelix		TMhelix	86	105			4639823	1736961	2056	141:DeepTMHMM: helix	0	0	0	2905	6	17
18	DeepTMHMM:outside		outside	106	110			4639824	1736961	10025	0	0	0	2905	0	18
19	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	106	111			4588125	1736961	3	136:Membrane Protein	0	0	0	2905	0	19
20	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	111	136			4588112	1736961	5	136:Membrane Protein	0	0	0	2905	0	20
21	DeepTMHMM:TMhelix		TMhelix	111	131			4639825	1736961	2056	141:DeepTMHMM: helix	0	0	0	2905	6	21
22	PRINTS:PR01036		Tetracycline resistance protein TetB signature	114	135			4588095	1736961	4422	0	0	0	2905	0	22
23	DeepTMHMM:inside		inside	132	146			4639826	1736961	9730	0	0	0	2905	0	23
24	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	136	147			4588106	1736961	18	136:Membrane Protein	0	0	0	2905	0	24
25	PRINTS:PR01036		Tetracycline resistance protein TetB signature	144	169			4588097	1736961	4422	0	0	0	2905	0	25
26	DeepTMHMM:TMhelix		TMhelix	147	167			4639827	1736961	2056	141:DeepTMHMM: helix	0	0	0	2905	6	26
27	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	147	168			4588116	1736961	5	136:Membrane Protein	0	0	0	2905	0	27
28	DeepTMHMM:outside		outside	168	176			4639828	1736961	10025	0	0	0	2905	0	28
29	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	168	173			4588126	1736961	3	136:Membrane Protein	0	0	0	2905	0	29
30	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	173	197			4588109	1736961	5	136:Membrane Protein	0	0	0	2905	0	30
31	DeepTMHMM:TMhelix		TMhelix	177	194			4639829	1736961	2056	141:DeepTMHMM: helix	0	0	0	2905	6	31
32	DeepTMHMM:inside		inside	195	210			4639830	1736961	9730	0	0	0	2905	0	32
33	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	197	208			4588103	1736961	18	136:Membrane Protein	0	0	0	2905	0	33
34	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	208	231			4588113	1736961	5	136:Membrane Protein	0	0	0	2905	0	34
35	DeepTMHMM:TMhelix		TMhelix	211	228			4639831	1736961	2056	141:DeepTMHMM: helix	0	0	0	2905	6	35
36	DeepTMHMM:outside		outside	229	241			4639832	1736961	10025	0	0	0	2905	0	36
37	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	231	236			4588124	1736961	3	136:Membrane Protein	0	0	0	2905	0	37
38	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	236	259			4588119	1736961	5	136:Membrane Protein	0	0	0	2905	0	38
39	DeepTMHMM:TMhelix		TMhelix	242	259			4639833	1736961	2056	141:DeepTMHMM: helix	0	0	0	2905	6	39
40	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	259	279			4588101	1736961	18	136:Membrane Protein	0	0	0	2905	0	40
41	DeepTMHMM:inside		inside	260	278			4639834	1736961	9730	0	0	0	2905	0	41
42	DeepTMHMM:TMhelix		TMhelix	279	299			4639835	1736961	2056	141:DeepTMHMM: helix	0	0	0	2905	6	42
43	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	279	302			4588118	1736961	5	136:Membrane Protein	0	0	0	2905	0	43
44	DeepTMHMM:outside		outside	300	313			4639836	1736961	10025	0	0	0	2905	0	44
45	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	302	313			4588127	1736961	3	136:Membrane Protein	0	0	0	2905	0	45
46	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	313	333			4588115	1736961	5	136:Membrane Protein	0	0	0	2905	0	46
47	DeepTMHMM:TMhelix		TMhelix	314	333			4639837	1736961	2056	141:DeepTMHMM: helix	0	0	0	2905	6	47
48	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	333	344			4588102	1736961	18	136:Membrane Protein	0	0	0	2905	0	48
49	DeepTMHMM:inside		inside	334	344			4639838	1736961	9730	0	0	0	2905	0	49
50	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	344	363			4588107	1736961	5	136:Membrane Protein	0	0	0	2905	0	50
51	DeepTMHMM:TMhelix		TMhelix	345	363			4639839	1736961	2056	141:DeepTMHMM: helix	0	0	0	2905	6	51
52	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	363	368			4588121	1736961	3	136:Membrane Protein	0	0	0	2905	0	52
53	DeepTMHMM:outside		outside	364	368			4639840	1736961	10025	0	0	0	2905	0	53
54	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	368	391			4588110	1736961	5	136:Membrane Protein	0	0	0	2905	0	54
55	DeepTMHMM:TMhelix		TMhelix	369	391			4639841	1736961	2056	141:DeepTMHMM: helix	0	0	0	2905	6	55
56	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	391	410			4588100	1736961	18	136:Membrane Protein	0	0	0	2905	0	56
57	DeepTMHMM:inside		inside	392	408			4639842	1736961	9730	0	0	0	2905	0	57
58	DeepTMHMM:TMhelix		TMhelix	409	429			4639843	1736961	2056	141:DeepTMHMM: helix	0	0	0	2905	6	58
59	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	410	430			4588114	1736961	5	136:Membrane Protein	0	0	0	2905	0	59
60	PRINTS:PR01036		Tetracycline resistance protein TetB signature	411	431			4588096	1736961	4422	0	0	0	2905	0	60
61	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	430	479			4588122	1736961	3	136:Membrane Protein	0	0	0	2905	0	61
62	DeepTMHMM:outside		outside	430	479			4639844	1736961	10025	0	0	0	2905	0	62
63	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	479	498			4588117	1736961	5	136:Membrane Protein	0	0	0	2905	0	63
64	DeepTMHMM:TMhelix		TMhelix	480	498			4639845	1736961	2056	141:DeepTMHMM: helix	0	0	0	2905	6	64
65	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	498	545			4588099	1736961	18	136:Membrane Protein	0	0	0	2905	0	65
66	DeepTMHMM:inside		inside	499	545			4639846	1736961	9730	0	0	0	2905	0	66

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