Cellulosome Database Search

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Genome ifo

Batch4_genome_fasta/bc2035: Micromonospora inositola, Utrum1 [+] (ncbi)

Genbanks info:

Genbank_acc: PaGL#61_05728
Genome uid: 401
6178382-6179581 [+] (399)

Sequence:

SAALNVRARWRELTTTLAGVALFAFGLAELYVPLAGYVEGAGPDLAALPDGWLAVLTVLLVGYGLSVAGCTAYPRAAAVL
AGACFAAQSFTPVLPEWPVVPLLALLAACFGCVAVGGRAAPAVAALSYIVSLGIENAMAGDSDWVFILFVGLAVFGPGYA
VRMRRAQAARLVALAAEREAAARTDERLRVARELHDIVSHGVSVMVLQAGAAQAVLDGDPDQARASLDVVQDVGREVVTE
LRRLLVILRGAEAVPEGLPSLRRIDPLTAGVRLAGGQVDVAVTGDLGTIPAAADVSGYRILQEALTNAARHAPGSTVRVS
IEVAGDTLRLDVVDDGAGPARRSAGTGHGLTGIRERVELFGGTFSAVPRAQGGFEVRVELPFDAEASAAVLPPAGITG

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:SIGNAL_PEPTIDE_N_REGION		N-terminal region of a signal peptide.	0	13			4598226	1739717	21	135:all secretion /signal peptide, lipo	0	0	0	5661	3	1
2	PHOBIUS:SIGNAL_PEPTIDE		Signal peptide region	0	29			4598218	1739717	19	135:all secretion /signal peptide, lipo	0	0	0	5661	3	2
3	DeepTMHMM:inside		inside	1	13			4647885	1739717	9730	0	0	0	5661	0	3
4	PHOBIUS:SIGNAL_PEPTIDE_H_REGION		Hydrophobic region of a signal peptide.	13	24			4598222	1739717	24	135:all secretion /signal peptide, lipo	0	0	0	5661	3	4
5	DeepTMHMM:TMhelix		TMhelix	14	31			4647886	1739717	2056	141:DeepTMHMM: helix	0	0	0	5661	6	5
6	PHOBIUS:SIGNAL_PEPTIDE_C_REGION		C-terminal region of a signal peptide.	24	29			4598227	1739717	26	135:all secretion /signal peptide, lipo	0	0	0	5661	3	6
7	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	29	52			4598219	1739717	3	136:Membrane Protein	0	0	0	5661	0	7
8	DeepTMHMM:outside		outside	32	55			4647887	1739717	10025	0	0	0	5661	0	8
9	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	52	70			4598214	1739717	5	136:Membrane Protein	0	0	0	5661	0	9
10	DeepTMHMM:TMhelix		TMhelix	56	69			4647888	1739717	2056	141:DeepTMHMM: helix	0	0	0	5661	6	10
11	DeepTMHMM:inside		inside	70	77			4647889	1739717	9730	0	0	0	5661	0	11
12	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	70	76			4598225	1739717	18	136:Membrane Protein	0	0	0	5661	0	12
13	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	76	94			4598216	1739717	5	136:Membrane Protein	0	0	0	5661	0	13
14	DeepTMHMM:TMhelix		TMhelix	78	91			4647890	1739717	2056	141:DeepTMHMM: helix	0	0	0	5661	6	14
15	DeepTMHMM:outside		outside	92	101			4647891	1739717	10025	0	0	0	5661	0	15
16	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	94	99			4598221	1739717	3	136:Membrane Protein	0	0	0	5661	0	16
17	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	99	116			4598213	1739717	5	136:Membrane Protein	0	0	0	5661	0	17
18	DeepTMHMM:TMhelix		TMhelix	102	112			4647892	1739717	2056	141:DeepTMHMM: helix	0	0	0	5661	6	18
19	DeepTMHMM:inside		inside	113	119			4647893	1739717	9730	0	0	0	5661	0	19
20	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	116	122			4598224	1739717	18	136:Membrane Protein	0	0	0	5661	0	20
21	DeepTMHMM:TMhelix		TMhelix	120	135			4647894	1739717	2056	141:DeepTMHMM: helix	0	0	0	5661	6	21
22	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	122	139			4598215	1739717	5	136:Membrane Protein	0	0	0	5661	0	22
23	DeepTMHMM:outside		outside	136	145			4647895	1739717	10025	0	0	0	5661	0	23
24	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	139	144			4598220	1739717	3	136:Membrane Protein	0	0	0	5661	0	24
25	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	144	162			4598217	1739717	5	136:Membrane Protein	0	0	0	5661	0	25
26	DeepTMHMM:TMhelix		TMhelix	146	162			4647896	1739717	2056	141:DeepTMHMM: helix	0	0	0	5661	6	26
27	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	162	399			4598223	1739717	18	136:Membrane Protein	0	0	0	5661	0	27
28	DeepTMHMM:inside		inside	163	399			4647897	1739717	9730	0	0	0	5661	0	28
29	PFAM:PF07730	IPR011712	Histidine kinase	186	251	61.5	8.4E-17	4598211	1739717	1640	0	0	0	5661	0	29
30	SUPERFAMILY:SSF55874	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	277	382			4598230	1739717	122	0	0	0	5661	0	30
31	SMART:SM00387	IPR003594		293	385			4598210	1739717	1	0	0	0	5661	0	31
32	CDD:cd16917		HATPase_UhpB-NarQ-NarX-like	298	382			4598229	1739717	3645	0	0	0	5661	0	32
33	PFAM:PF02518	IPR003594	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	298	384	28.9	1.2E-6	4598212	1739717	99	0	0	0	5661	0	33
34	PROSITE_PROFILES:PS50109	IPR005467	Histidine kinase domain profile.	299	385			4598228	1739717	103	0	0	0	5661	0	34

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