Cellulosome Database Search

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Genome ifo

Batch4_genome_fasta/bc2036: Sphingomonas sp., CR2A3 [-] (ncbi)

Genbanks info:

Genbank_acc: PaGL#62_00408
Genome uid: 402
417386-418693 [+] (435)

Sequence:

ATISTPDGATRTDTTAIGRYRWVVCGLLFASTTICYIDRQIFGLLKPVLDAELGWSETDYGDIVAAFSLLYAFGYLLGGR
LMDRIGVRAGLGIAVFGWSLAAAAHGLMSSVLGFKVARGALGIAEGGNFPASIKAVREWFPPQERAFATGLFNAGSNIGA
IVTPIALPFVVALLGWRGAFLIAGSLGMIWLAAWLRFYERPERQRRLSAGELAHIRSGEGEARAEDVPWLALLRYRGTWA
YIVGMLMTSPVWWFYLNWVPGFLHDRFGTNMMGAIGPLVAIYLVADIGSIAGGWISSRMIRHGMRPVPARLLAMLLMALC
PLPVAFIAGVSGLWPAVLLIALAAAGHQGLSANLYTLASDTVPARGLSSVIGFGGFAAGIMGMFVAMLVGRILDATGGNY
AVLFVGAALAYPLAVLAMALILRRPAAAISPREH

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	0	20			4663905	1742646	18	136:Membrane Protein	0	0	0	399	0	1
2	DeepTMHMM:inside		inside	1	26			4688685	1742646	9730	0	0	0	399	0	2
3	SUPERFAMILY:SSF103473	IPR036259	MFS transporter superfamily	11	427			4663910	1742646	940	0	0	0	399	0	3
4	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	20	40			4663892	1742646	5	136:Membrane Protein	0	0	0	399	0	4
5	CDD:cd17319		MFS_ExuT_GudP_like	21	422			4663909	1742646	6949	0	0	0	399	0	5
6	PROSITE_PROFILES:PS50850	IPR020846	Major facilitator superfamily (MFS) profile.	24	426			4663908	1742646	938	0	0	0	399	0	6
7	DeepTMHMM:TMhelix		TMhelix	27	47			4688686	1742646	2056	141:DeepTMHMM: helix	0	0	0	399	6	7
8	PFAM:PF07690	IPR011701	Major Facilitator Superfamily	28	385	180.9	0	4663886	1742646	937	0	0	0	399	0	8
9	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	40	59			4663901	1742646	3	136:Membrane Protein	0	0	0	399	0	9
10	DeepTMHMM:outside		outside	48	61			4688687	1742646	10025	0	0	0	399	0	10
11	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	59	78			4663896	1742646	5	136:Membrane Protein	0	0	0	399	0	11
12	DeepTMHMM:TMhelix		TMhelix	62	80			4688688	1742646	2056	141:DeepTMHMM: helix	0	0	0	399	6	12
13	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	78	89			4663907	1742646	18	136:Membrane Protein	0	0	0	399	0	13
14	DeepTMHMM:inside		inside	81	89			4688689	1742646	9730	0	0	0	399	0	14
15	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	89	109			4663895	1742646	5	136:Membrane Protein	0	0	0	399	0	15
16	DeepTMHMM:TMhelix		TMhelix	90	105			4688690	1742646	2056	141:DeepTMHMM: helix	0	0	0	399	6	16
17	DeepTMHMM:outside		outside	106	119			4688691	1742646	10025	0	0	0	399	0	17
18	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	109	178			4663900	1742646	3	136:Membrane Protein	0	0	0	399	0	18
19	DeepTMHMM:TMhelix		TMhelix	120	134			4688692	1742646	2056	141:DeepTMHMM: helix	0	0	0	399	6	19
20	DeepTMHMM:inside		inside	135	149			4688693	1742646	9730	0	0	0	399	0	20
21	DeepTMHMM:TMhelix		TMhelix	150	168			4688694	1742646	2056	141:DeepTMHMM: helix	0	0	0	399	6	21
22	DeepTMHMM:outside		outside	169	178			4688695	1742646	10025	0	0	0	399	0	22
23	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	178	199			4663887	1742646	5	136:Membrane Protein	0	0	0	399	0	23
24	DeepTMHMM:TMhelix		TMhelix	179	196			4688696	1742646	2056	141:DeepTMHMM: helix	0	0	0	399	6	24
25	DeepTMHMM:inside		inside	197	239			4688697	1742646	9730	0	0	0	399	0	25
26	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	199	238			4663906	1742646	18	136:Membrane Protein	0	0	0	399	0	26
27	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	238	256			4663888	1742646	5	136:Membrane Protein	0	0	0	399	0	27
28	DeepTMHMM:TMhelix		TMhelix	240	260			4688698	1742646	2056	141:DeepTMHMM: helix	0	0	0	399	6	28
29	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	256	275			4663898	1742646	3	136:Membrane Protein	0	0	0	399	0	29
30	DeepTMHMM:outside		outside	261	275			4688699	1742646	10025	0	0	0	399	0	30
31	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	275	296			4663893	1742646	5	136:Membrane Protein	0	0	0	399	0	31
32	DeepTMHMM:TMhelix		TMhelix	276	296			4688700	1742646	2056	141:DeepTMHMM: helix	0	0	0	399	6	32
33	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	296	307			4663903	1742646	18	136:Membrane Protein	0	0	0	399	0	33
34	DeepTMHMM:inside		inside	297	311			4688701	1742646	9730	0	0	0	399	0	34
35	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	307	331			4663889	1742646	5	136:Membrane Protein	0	0	0	399	0	35
36	DeepTMHMM:TMhelix		TMhelix	312	328			4688702	1742646	2056	141:DeepTMHMM: helix	0	0	0	399	6	36
37	DeepTMHMM:outside		outside	329	336			4688703	1742646	10025	0	0	0	399	0	37
38	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	331	336			4663897	1742646	3	136:Membrane Protein	0	0	0	399	0	38
39	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	336	359			4663890	1742646	5	136:Membrane Protein	0	0	0	399	0	39
40	DeepTMHMM:TMhelix		TMhelix	337	355			4688704	1742646	2056	141:DeepTMHMM: helix	0	0	0	399	6	40
41	DeepTMHMM:inside		inside	356	371			4688705	1742646	9730	0	0	0	399	0	41
42	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	359	370			4663904	1742646	18	136:Membrane Protein	0	0	0	399	0	42
43	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	370	394			4663891	1742646	5	136:Membrane Protein	0	0	0	399	0	43
44	DeepTMHMM:TMhelix		TMhelix	372	391			4688706	1742646	2056	141:DeepTMHMM: helix	0	0	0	399	6	44
45	DeepTMHMM:outside		outside	392	401			4688707	1742646	10025	0	0	0	399	0	45
46	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	394	399			4663899	1742646	3	136:Membrane Protein	0	0	0	399	0	46
47	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	399	423			4663894	1742646	5	136:Membrane Protein	0	0	0	399	0	47
48	DeepTMHMM:TMhelix		TMhelix	402	422			4688708	1742646	2056	141:DeepTMHMM: helix	0	0	0	399	6	48
49	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	423	435			4663902	1742646	18	136:Membrane Protein	0	0	0	399	0	49
50	DeepTMHMM:inside		inside	423	435			4688709	1742646	9730	0	0	0	399	0	50

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