We will take the links to it out when ready.
Batch4_genome_fasta/bc2036: Sphingomonas sp., CR2A3 [-] (ncbi)
RPLIAILLLGLAAPASAQPAARFAWFDYAGRDASDLVPANPGDYRNPILKGFYPDPSVTRVGDDFYLVTSTFGWFPGIPV FHSRDLVNWTQIGNAIDRPEMLDFKRLGLSRGVFAPTIQAKDDVFYILNTCVDCGGNFVITAKDPAGPWSDPVWLSDLEG GIDPSLFFDADGRSWVVNNGPPEGEPLYEGHRAIWIQEFDLKTLRTIGPRKLIVNGGVDIASKPIWIEGPHIFRKDGWYY LSCAEGGTAQGHSQVILRSRSVTGPYEPGPRNPILTQRDLPADRPLPVTSAGHAQLVTTPDGQWWATFLAVRPYAGDFYA TGRETFLLPVEWRDGWPVILEPGKPIPYVHARPALPPGKAPPVPTSGAFAVRDAFDGPALPRYWTMLRNPRERWYALDRG DLVLTARPVGLADNANPSFLARRQQHMNATASTRMDFAPEAEGDRAGIVALQNDDYWLFLGLGREGGKLRLVVDRRDGPK TPKLGTTLFAREDVGPGPILLRIAVEGRRYTFAYARPAASPAWRILGTIETDSLTTKVAGGFVGSFFGLFAGRGE
| extraction_method | ipr_acc | domain | start | end | score | evalue | rowid | gbid | domain_id | mod_id | cat_id | redundant | used | ord | mod_group | ||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1 | PHOBIUS:SIGNAL_PEPTIDE_N_REGION | N-terminal region of a signal peptide. | 0 | 3 | 4657770 | 1743772 | 21 | 135:all secretion /signal peptide, lipo | 0 | 0 | 0 | 1525 | 3 | 1 | |||
| 2 | PHOBIUS:SIGNAL_PEPTIDE | Signal peptide region | 0 | 18 | 4657771 | 1743772 | 19 | 135:all secretion /signal peptide, lipo | 0 | 0 | 0 | 1525 | 3 | 2 | |||
| 3 | PHOBIUS:SIGNAL_PEPTIDE_H_REGION | Hydrophobic region of a signal peptide. | 3 | 14 | 4657769 | 1743772 | 24 | 135:all secretion /signal peptide, lipo | 0 | 0 | 0 | 1525 | 3 | 3 | |||
| 4 | PHOBIUS:SIGNAL_PEPTIDE_C_REGION | C-terminal region of a signal peptide. | 14 | 18 | 4657768 | 1743772 | 26 | 135:all secretion /signal peptide, lipo | 0 | 0 | 0 | 1525 | 3 | 4 | |||
| 5 | PHOBIUS:NON_CYTOPLASMIC_DOMAIN | Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region. | 18 | 556 | 4657767 | 1743772 | 3 | 136:Membrane Protein | 0 | 0 | 0 | 1525 | 0 | 5 | |||
| 6 | SIGNALP6:SP | SP | 18 | 19 | 0 | 4680071 | 1743772 | 1978 | 135:all secretion /signal peptide, lipo | 0 | 0 | 0 | 1525 | 3 | 6 | ||
| 7 | PFAM:PF04616 | IPR006710 | Glycosyl hydrolases family 43 | 44 | 338 | 332.9 | 0 | 4657766 | 1743772 | 1398 | 46:GH43 | 0 | 0 | 0 | 1525 | 4 | 7 |
| 8 | SUPERFAMILY:SSF75005 | IPR023296 | Glycosyl hydrolase, five-bladed beta-propellor domain superfamily | 44 | 357 | 4657773 | 1743772 | 1404 | 157:GH32 | 0 | 0 | 0 | 1525 | 4 | 8 | ||
| 9 | CDD:cd18617 | GH43_XynB-like | 46 | 340 | 4657772 | 1743772 | 5108 | 46:GH43 | 0 | 0 | 0 | 1525 | 4 | 9 | |||
| 10 | SUPERFAMILY:SSF49899 | IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily | 369 | 553 | 4657774 | 1743772 | 1405 | 0 | 0 | 0 | 1525 | 0 | 10 | |||
| 11 | PFAM:PF17851 | IPR041542 | Beta xylosidase C-terminal Concanavalin A-like domain | 372 | 552 | 124.7 | 3.9E-36 | 4657765 | 1743772 | 1399 | 0 | 0 | 0 | 1525 | 0 | 11 |