Cellulosome Database Search

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Genome ifo

Batch4_genome_fasta/bc2038: Terrisporobacter hibernicus, CB-LS-10-2 [+] (ncbi)

Genbanks info:

Genbank_acc: AnGL54_03895
Genome uid: 403
3969776-3970300 [+] (174)

Sequence:

DRCYKTLIVSLLVLGNLFVSIKQIYALEYYYLDNKTENCFLQIKEQDEKKEAVINLNDEQIMLLSKLVAGEARGESYEGQ
VAVAAVVINRVKDSRFPDSLEGVIYQKNAFSVVKNGTIYAEPTSSTYRAAQEALYGSDPTNNAIYFWNPDISTCNWINTL
NPYLRIGNHVFAK

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:SIGNAL_PEPTIDE_N_REGION		N-terminal region of a signal peptide.	0	7			4739758	1750350	21	135:all secretion /signal peptide, lipo	0	0	0	4008	3	1
2	PHOBIUS:SIGNAL_PEPTIDE		Signal peptide region	0	27			4739757	1750350	19	135:all secretion /signal peptide, lipo	0	0	0	4008	3	2
3	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	0	19			2968432	1750350	18	136:Membrane Protein	0	0	0	4008	0	3
4	DeepTMHMM:inside		inside	1	21			2986096	1750350	9730	0	0	0	4008	0	4
5	PHOBIUS:SIGNAL_PEPTIDE_H_REGION		Hydrophobic region of a signal peptide.	7	19			4739756	1750350	24	135:all secretion /signal peptide, lipo	0	0	0	4008	3	5
6	CDD:cd13143	IPR045070	MATE_MepA_like	11	424			2968449	1750350	2779	0	0	0	4008	0	6
7	PHOBIUS:SIGNAL_PEPTIDE_C_REGION		C-terminal region of a signal peptide.	19	27			4739755	1750350	26	135:all secretion /signal peptide, lipo	0	0	0	4008	3	7
8	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	19	37			2968445	1750350	5	136:Membrane Protein	0	0	0	4008	0	8
9	PFAM:PF01554	IPR002528	MatE	22	185	96.7	1.1E-27	2968422	1750350	1578	0	0	0	4008	0	9
10	DeepTMHMM:TMhelix		TMhelix	22	42			2986097	1750350	2056	141:DeepTMHMM: helix	0	0	0	4008	6	10
11	SIGNALP6:SP		SP	27	28	0		4746693	1750350	1978	135:all secretion /signal peptide, lipo	0	0	0	4008	3	11
12	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	27	174			4739754	1750350	3	136:Membrane Protein	0	0	0	4008	0	12
13	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	37	48			2968425	1750350	3	136:Membrane Protein	0	0	0	4008	0	13
14	DeepTMHMM:outside		outside	43	54			2986098	1750350	10025	0	0	0	4008	0	14
15	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	48	75			2968440	1750350	5	136:Membrane Protein	0	0	0	4008	0	15
16	DeepTMHMM:TMhelix		TMhelix	55	75			2986099	1750350	2056	141:DeepTMHMM: helix	0	0	0	4008	6	16
17	PFAM:PF07486	IPR011105	Cell Wall Hydrolase	74	173	103.6	1.1E-29	4739753	1750350	361	0	0	0	4008	0	17
18	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	75	95			2968435	1750350	18	136:Membrane Protein	0	0	0	4008	0	18
19	DeepTMHMM:inside		inside	76	97			2986100	1750350	9730	0	0	0	4008	0	19
20	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	95	118			2968438	1750350	5	136:Membrane Protein	0	0	0	4008	0	20
21	DeepTMHMM:TMhelix		TMhelix	98	118			2986101	1750350	2056	141:DeepTMHMM: helix	0	0	0	4008	6	21
22	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	118	137			2968428	1750350	3	136:Membrane Protein	0	0	0	4008	0	22
23	DeepTMHMM:outside		outside	119	138			2986102	1750350	10025	0	0	0	4008	0	23
24	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	137	156			2968442	1750350	5	136:Membrane Protein	0	0	0	4008	0	24
25	DeepTMHMM:TMhelix		TMhelix	139	160			2986103	1750350	2056	141:DeepTMHMM: helix	0	0	0	4008	6	25
26	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	156	167			2968431	1750350	18	136:Membrane Protein	0	0	0	4008	0	26
27	DeepTMHMM:inside		inside	161	167			2986104	1750350	9730	0	0	0	4008	0	27
28	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	167	189			2968441	1750350	5	136:Membrane Protein	0	0	0	4008	0	28
29	DeepTMHMM:TMhelix		TMhelix	168	189			2986105	1750350	2056	141:DeepTMHMM: helix	0	0	0	4008	6	29
30	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	189	194			2968424	1750350	3	136:Membrane Protein	0	0	0	4008	0	30
31	DeepTMHMM:outside		outside	190	197			2986106	1750350	10025	0	0	0	4008	0	31
32	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	194	219			2968444	1750350	5	136:Membrane Protein	0	0	0	4008	0	32
33	DeepTMHMM:TMhelix		TMhelix	198	218			2986107	1750350	2056	141:DeepTMHMM: helix	0	0	0	4008	6	33
34	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	219	239			2968433	1750350	18	136:Membrane Protein	0	0	0	4008	0	34
35	DeepTMHMM:inside		inside	219	244			2986108	1750350	9730	0	0	0	4008	0	35
36	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	239	261			2968447	1750350	5	136:Membrane Protein	0	0	0	4008	0	36
37	DeepTMHMM:TMhelix		TMhelix	245	266			2986109	1750350	2056	141:DeepTMHMM: helix	0	0	0	4008	6	37
38	PFAM:PF01554	IPR002528	MatE	251	406	77.6	7.9E-22	2968423	1750350	1578	0	0	0	4008	0	38
39	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	261	272			2968427	1750350	3	136:Membrane Protein	0	0	0	4008	0	39
40	DeepTMHMM:outside		outside	267	276			2986110	1750350	10025	0	0	0	4008	0	40
41	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	272	297			2968446	1750350	5	136:Membrane Protein	0	0	0	4008	0	41
42	DeepTMHMM:TMhelix		TMhelix	277	297			2986111	1750350	2056	141:DeepTMHMM: helix	0	0	0	4008	6	42
43	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	297	317			2968436	1750350	18	136:Membrane Protein	0	0	0	4008	0	43
44	DeepTMHMM:inside		inside	298	318			2986112	1750350	9730	0	0	0	4008	0	44
45	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	317	345			2968439	1750350	5	136:Membrane Protein	0	0	0	4008	0	45
46	DeepTMHMM:TMhelix		TMhelix	319	339			2986113	1750350	2056	141:DeepTMHMM: helix	0	0	0	4008	6	46
47	DeepTMHMM:outside		outside	340	360			2986114	1750350	10025	0	0	0	4008	0	47
48	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	345	364			2968429	1750350	3	136:Membrane Protein	0	0	0	4008	0	48
49	DeepTMHMM:TMhelix		TMhelix	361	377			2986115	1750350	2056	141:DeepTMHMM: helix	0	0	0	4008	6	49
50	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	364	382			2968443	1750350	5	136:Membrane Protein	0	0	0	4008	0	50
51	DeepTMHMM:inside		inside	378	390			2986116	1750350	9730	0	0	0	4008	0	51
52	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	382	393			2968434	1750350	18	136:Membrane Protein	0	0	0	4008	0	52
53	DeepTMHMM:TMhelix		TMhelix	391	411			2986117	1750350	2056	141:DeepTMHMM: helix	0	0	0	4008	6	53
54	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	393	414			2968437	1750350	5	136:Membrane Protein	0	0	0	4008	0	54
55	DeepTMHMM:outside		outside	412	417			2986118	1750350	10025	0	0	0	4008	0	55
56	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	414	419			2968426	1750350	3	136:Membrane Protein	0	0	0	4008	0	56
57	DeepTMHMM:TMhelix		TMhelix	418	439			2986119	1750350	2056	141:DeepTMHMM: helix	0	0	0	4008	6	57
58	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	419	439			2968448	1750350	5	136:Membrane Protein	0	0	0	4008	0	58
59	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	439	455			2968430	1750350	18	136:Membrane Protein	0	0	0	4008	0	59
60	DeepTMHMM:inside		inside	440	455			2986120	1750350	9730	0	0	0	4008	0	60

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