Cellulosome Database Search

This page is just for checking and is not meant to be part of the public site.

We will take the links to it out when ready.

Genome ifo

Batch4_genome_fasta/bc2040: Niallia taxi, AG-1 [+] (ncbi)

Genbanks info:

Genbank_acc: PaGL#37_05299
Genome uid: 404
1321351-1322319 [+] (322)

Sequence:

KAVVLEKACAPQDLYVKEVPMPKVKPGWVLVKIKAFGINRSEIYTRQGHSPSVKLPRIIGIECVGEIADPSDSAMKMGQR
VVSLMGGLGREFNGSYAEYALIPSGQVYAINNELDWVKLAAIPEMYYTAYSSLFDSLMLTAGDTLLIRGGTSSVGVAALQ
LAKSIGVTVVSTTRNKQKVEQLNKLGADHVLLDEGDIQPQLYSTFPNGVNKILELVGTVTLKNSLGMLDEKGILCMTGIL
GGEWEMESFEPMVDIPSGTYFTQFDSGVNFKPQLLTKLFQHIEQFAIEVPIARVFTLEEISQAHLLMESNGANGKIVIVN
T

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	CDD:cd08243		quinone_oxidoreductase_like_1	0	320			4794932	1753561	10548	0	0	0	3124	0	1
2	SUPERFAMILY:SSF50129	IPR011032	GroES-like superfamily	0	147			4794934	1753561	313	0	0	0	3124	0	2
3	SMART:SM00829	IPR020843		9	319			4794929	1753561	1	0	0	0	3124	0	3
4	PFAM:PF08240	IPR013154	Alcohol dehydrogenase GroES-like domain	26	84	34.2	1.8E-8	4794930	1753561	311	0	0	0	3124	0	4
5	SUPERFAMILY:SSF51735	IPR036291	NAD(P)-binding domain superfamily	114	247			4794933	1753561	206	0	0	0	3124	0	5
6	PFAM:PF13602		Zinc-binding dehydrogenase	185	319	60.9	2.5E-16	4794931	1753561	310	0	0	0	3124	0	6

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