Cellulosome Database Search

This page is just for checking and is not meant to be part of the public site.

We will take the links to it out when ready.

Genome ifo

Methanospirillum.hungatei.GP1: Methanospirillum.hungatei GP1, MhGP1 [-] (IMG)

Genbanks info:

Genbank_acc: 8064047142:MhGP1_00503
Genome uid: 405
523633-526758 [+] (1041)

Sequence:

KSIFRPNPEKMRLKGDLSGLLRLLDPKYDTDLRIEAILALGRMKTPVAVDELIQLFHDPDDDIRTAASNGLVLIGTEALG
PLVASLSTSDDITAGMVHVALTTMGDEAAQEIISHIPNLQGIGFERAGFILNSMGPKVIPILIDSFGTQDPTTIRFIEGL
FETFGRAAIQPLIRGLSHDQEEVRARISAYLIILGDQVVLDLLSSCAQDEDWLRELKFYIISEIGKPALDPLYLGLKDPN
PVISSMAQKAFLEYGESAIVPLISGLYDSDIEVRKVSENALIRIGEPIVPHLIEELSFRRDTEREPIVSAIQHIGEPAIP
YLIQNLNQAKGERLKTLIQILSRMGAITLPYLIGSVKEQSETSSLREAFLSMGRLAFPFLEEASERERGKTAIFAVDLLR
RIDPVRSVEPMVTALYHPDKEVRETALENLVESGEIAIPRLVQVLGSGNEDAVELARMALVNNGEPAVPHLIDALSDPMG
SNVSLVKEIIRENGVKALPYLIPLMVPGKDGSRDVTELIEETGLDATPYLLDALHNAGPDLAEPVKSHLTVLFQKDPETF
VKRLFTGSSLDTDLMYSLVYPSPQVIIPFLIDIFQGDDSSKALVAGDLLSRFGKDALDPFITALRNESDDDRKLEITSFL
IRIGPDAIPTLVSLLGDENLAPYAMAALSAIGEPAVPALLPLLKSSDPGVQQYTILALTRIGPPAATALMALMQEDEGLV
PLISRILAEMGGAALPELIQELQALQAEGQEGSSRGIAVMSLITEIALSKPSDLKHLFAIEDPLLTGMFERIFISKGEQI
LPSVLEAVMNEPDIPHLASSIFISMRSPSQTTVTRLLKSVEPGDRRKIALLKILGILKDPSSPSLMYDTLQDPDQNIRMT
AIRELGKFGREALEPLTDAMHDPDPKVRAAAVESLGDIGLPVLDQLITALKDQDGNIRAAAITGIAKIGEPGQFMLVQSL
DDKDRNVRMAVARLLEKSGWKPKYTTDRLSYLFAKEMFDELIRIGPPSVDTLARGLHDDDAEIREKSRDALTIIRDSIKV

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PFAM:PF13646		HEAT repeats	19	92	36.5	4.7E-9	4864645	1759117	4296	0	0	0	489	0	1
2	SUPERFAMILY:SSF48371	IPR016024	Armadillo-type fold	20	214			4864648	1759117	1188	0	0	0	489	0	2
3	SMART:SM00567	IPR004155	E-Z type HEAT repeats	30	60			4864642	1759117	6635	0	0	0	489	0	3
4	SMART:SM00567	IPR004155	E-Z type HEAT repeats	181	211			4864639	1759117	6635	0	0	0	489	0	4
5	SUPERFAMILY:SSF48371	IPR016024	Armadillo-type fold	226	562			4864649	1759117	1188	0	0	0	489	0	5
6	SUPERFAMILY:SSF48371	IPR016024	Armadillo-type fold	408	977			4864647	1759117	1188	0	0	0	489	0	6
7	SMART:SM00567	IPR004155	E-Z type HEAT repeats	420	449			4864643	1759117	6635	0	0	0	489	0	7
8	SMART:SM00567	IPR004155	E-Z type HEAT repeats	658	687			4864638	1759117	6635	0	0	0	489	0	8
9	SMART:SM00567	IPR004155	E-Z type HEAT repeats	688	717			4864640	1759117	6635	0	0	0	489	0	9
10	PFAM:PF13646		HEAT repeats	869	931	47.1	2.3E-12	4864644	1759117	4296	0	0	0	489	0	10
11	SMART:SM00567	IPR004155	E-Z type HEAT repeats	875	904			4864637	1759117	6635	0	0	0	489	0	11
12	PROSITE_PROFILES:PS50077	IPR021133	HEAT repeat profile.	892	931			4864646	1759117	6770	0	0	0	489	0	12
13	SMART:SM00567	IPR004155	E-Z type HEAT repeats	905	934			4864641	1759117	6635	0	0	0	489	0	13

↑ Top