Cellulosome Database Search

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Genome ifo

GCF_000255615.2: Acetivibrio thermocellus, AD2 [+] (ncbi)

Genbanks info:

Genbank_acc: WP_003519429.1:BCBBJIPK_01114
Genome uid: 68
1291161-1293443 [+] (760)

Sequence:

ESTHRLEKQILPIAISVSLVNWTLRSMFGPFDVGVLILTVVFTCVIFAAYNFAQKHERIKVLLFFGFSFLYLIACQVAVS
ARYMDWVVFLVAVYGFASTVYYFTIIRYRVAIVFLTGLIPFLTHSARTAKGITVHFLIYLLLFFLLYFERTRKKRAEAQG
CNISINKWYCISMSVFLAVIFVISLVVPKPSVIPRLAYVNAVIEQVVQPLGGGAAQQNLFQSINSNLYNPLSLKKQSQLD
SMTAPLSDRILFEVAAEEPLYLRIQSWDKYENNVWKVGNKELQEYKPVSGFYNDGIKYNVFVNLVKKAKEEGIVLPLPAD
ASEIWNYNSTPQARKKATIINVNNFSTRLIPVPIGVIDVYSEYENSENIYMNKSGSCNIGKDDTPKNWQSYDVEYMTQRI
PKSSFEHKLIEVLDRTTAESLLDMNTYKKNNGEPLDISYDNLNVLYWAAEDLKNVYENYTELPQNISDRIYNLAQRITEG
KESPYEKALAIEQYFHNSGYVYDLDPPRLPRGAEAVDYFLFESKKGFCIHYASAMVILARACGLPARYSEGYVADEFDSG
TGRFIVRDKDAHAFPEVYIPGYGWMVFEPTVSVREQDAISQFFSKVKSVLTSFRETVVNFVEIMPPWVRIMFIPFFLFSL
MFWIWFLRKMYVHSWKKRMLKLESDKAVDRILLKIIKLLNVVNLNRNLHETPLQYGQRIYKESGIDILGFVEVFNKSKYA
KIKPSVEDVKLGISLYGDTVIYVKGRLKWFNLLKYFWFV

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	0	11			2532625	264370	18	136:Membrane Protein	15	0	1	1082	0	1
2	DeepTMHMM:inside		inside	1	10			2545650	264370	9730	15	0	1	1082	0	2
3	DeepTMHMM:TMhelix		TMhelix	11	26			2545651	264370	2056	141:DeepTMHMM: helix	15	0	1	1082	5	3
4	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	11	29			2532628	264370	5	136:Membrane Protein	15	0	1	1082	0	4
5	PFAM:PF11992	IPR021878	TgpA N-terminal domain	21	292	42.9	3.2E-11	2532569	264370	840	15	0	1	1082	0	5
6	DeepTMHMM:outside		outside	27	35			2545652	264370	10025	15	0	1	1082	0	6
7	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	29	34			2532584	264370	3	136:Membrane Protein	15	0	1	1082	0	7
8	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	34	53			2532633	264370	5	136:Membrane Protein	15	0	1	1082	0	8
9	DeepTMHMM:TMhelix		TMhelix	36	49			2545653	264370	2056	141:DeepTMHMM: helix	15	0	1	1082	5	9
10	DeepTMHMM:inside		inside	50	61			2545654	264370	9730	15	0	1	1082	0	10
11	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	53	61			2532626	264370	18	136:Membrane Protein	15	0	1	1082	0	11
12	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	61	81			2532630	264370	5	136:Membrane Protein	15	0	1	1082	0	12
13	DeepTMHMM:TMhelix		TMhelix	62	74			2545655	264370	2056	141:DeepTMHMM: helix	15	0	1	1082	5	13
14	DeepTMHMM:outside		outside	75	86			2545656	264370	10025	15	0	1	1082	0	14
15	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	81	86			2532583	264370	3	136:Membrane Protein	15	0	1	1082	0	15
16	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	86	104			2532629	264370	5	136:Membrane Protein	15	0	1	1082	0	16
17	DeepTMHMM:TMhelix		TMhelix	87	101			2545657	264370	2056	141:DeepTMHMM: helix	15	0	1	1082	5	17
18	DeepTMHMM:inside		inside	102	110			2545658	264370	9730	15	0	1	1082	0	18
19	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	104	110			2532623	264370	18	136:Membrane Protein	15	0	1	1082	0	19
20	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	110	127			2532634	264370	5	136:Membrane Protein	15	0	1	1082	0	20
21	DeepTMHMM:TMhelix		TMhelix	111	125			2545659	264370	2056	141:DeepTMHMM: helix	15	0	1	1082	5	21
22	DeepTMHMM:outside		outside	126	132			2545660	264370	10025	15	0	1	1082	0	22
23	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	127	132			2532573	264370	3	136:Membrane Protein	15	0	1	1082	0	23
24	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	132	149			2532632	264370	5	136:Membrane Protein	15	0	1	1082	0	24
25	DeepTMHMM:TMhelix		TMhelix	133	149			2545661	264370	2056	141:DeepTMHMM: helix	15	0	1	1082	5	25
26	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	149	168			2532585	264370	18	136:Membrane Protein	15	0	1	1082	0	26
27	DeepTMHMM:inside		inside	150	168			2545662	264370	9730	15	0	1	1082	0	27
28	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	168	188			2532631	264370	5	136:Membrane Protein	15	0	1	1082	0	28
29	DeepTMHMM:TMhelix		TMhelix	169	188			2545663	264370	2056	141:DeepTMHMM: helix	15	0	1	1082	5	29
30	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	188	627			2532582	264370	3	136:Membrane Protein	15	0	1	1082	0	30
31	DeepTMHMM:outside		outside	189	628			2545664	264370	10025	15	0	1	1082	0	31
32	SUPERFAMILY:SSF54001	IPR038765	Papain-like cysteine peptidase superfamily	454	659			2532635	264370	844	15	0	1	1082	0	32
33	PFAM:PF01841	IPR002931	Transglutaminase-like superfamily	472	590	97.6	5.8E-28	2532571	264370	841	15	0	1	1082	0	33
34	SMART:SM00460	IPR002931		520	592			2532567	264370	1	15	0	1	1082	0	34
35	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	627	648			2532627	264370	5	136:Membrane Protein	15	0	1	1082	0	35
36	DeepTMHMM:TMhelix		TMhelix	629	648			2545665	264370	2056	141:DeepTMHMM: helix	15	0	1	1082	5	36
37	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	648	760			2532624	264370	18	136:Membrane Protein	15	0	1	1082	0	37
38	DeepTMHMM:inside		inside	649	760			2545666	264370	9730	15	0	1	1082	0	38

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