Cellulosome Database Search

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Genome ifo

GCF_000518765.1: Ruminococcus flavefaciens, ATCC 19208 [+] (ncbi)

Genbanks info:

Genbank_acc: WP_028516748.1:NBHKBMOL_01632
Genome uid: 21
5295-7286 [+] (663)

Sequence:

SKKPFYITTPIYYPSGDPHIGHCYTTVACDSIARYKRMQGYDVMFLTGTDEHGLKIEQKAAEKGVTPKEYVDVIVDKFKN
LWKYMNISYDRYIRTTDDYHVEAVQKIFKALYDKGYIYKGEYSGKYCTPCESFWTESQLDEHGCCPECHRPVKFAKEEAY
FFKMSPFAERIEKLLLETDYLRPKTRAVELVNNFIKPGLEDLCVSRTSFTWGVPVSFDEKHVVYVWIDALSNYITALGYE
NSAHSDYEKYWPADVHMVAKDIMRFHAIIWPAMLMALDLPLPKHLAVHGWITMAGKNGESEKMSKSLGNVVDPFVLGERY
GQDSIRYHILREMALGADSLFSNEIMINRINSDLANGFGNLVSRTVAMADKYFGGTLPTEREAEPIDDEFKSAVTGLCSV
VDGFVDETKIKQALESIFEVVSRANKYIDETEPWKLGKDEAKKARLAAVLYNLLEAIRITSALLAPFMPTVMPKVWEQIG
ATAADVEYDNLDKVGVLPANVTVHKGEILFPRIDVDKEIEELNAILTKNMEAAKAKLSAAEKGEDAAEPEKIELKPEITI
DDFAKVEIRVAKVVACEKVKKSDKLLCLQLDDGMGGRQVVSGIAQYYTPEDLIGKKLQLIANLKPVKLRGVDSNGMICAA
DTPDGVKVIFVDDSIPVGSKIR

metG

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PROSITE_PROFILES:PS51257		Prokaryotic membrane lipoprotein lipid attachment site profile.	0	30			783302	27666	54	135:all secretion /signal peptide, lipo	13	0	1	73	0	1
2	SUPERFAMILY:SSF52374		-	2	357			783307	27666	12	13	0	1	73	0	2
3	CDD:cd00814	IPR033911	MetRS_core	4	342			783304	27666	1805	13	0	1	73	0	3
4	PFAM:PF09334	IPR015413	tRNA synthetases class I (M)	6	151	167.4	0	783298	27666	1798	13	0	1	73	0	4
5	PRINTS:PR01041	IPR033911	Methionyl-tRNA synthetase signature	7	21			783295	27666	1797	13	0	1	73	0	5
6	PRINTS:PR01041	IPR033911	Methionyl-tRNA synthetase signature	39	54			783297	27666	1797	13	0	1	73	0	6
7	PRINTS:PR01041	IPR033911	Methionyl-tRNA synthetase signature	87	99			783294	27666	1797	13	0	1	73	0	7
8	PFAM:PF09334	IPR015413	tRNA synthetases class I (M)	154	366	190.5	0	783299	27666	1798	13	0	1	73	0	8
9	PRINTS:PR01041	IPR033911	Methionyl-tRNA synthetase signature	223	235			783296	27666	1797	13	0	1	73	0	9
10	PRINTS:PR01041	IPR033911	Methionyl-tRNA synthetase signature	256	272			783284	27666	1797	13	0	1	73	0	10
11	CDD:cd07957	IPR041872	Anticodon_Ia_Met	350	480			783305	27666	1807	13	0	1	73	0	11
12	PRINTS:PR01041	IPR033911	Methionyl-tRNA synthetase signature	353	365			783285	27666	1797	13	0	1	73	0	12
13	SUPERFAMILY:SSF47323	IPR009080	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding	355	577			783309	27666	726	13	0	1	73	0	13
14	PFAM:PF19303	IPR041872	Anticodon binding domain of methionyl tRNA ligase	380	522	38.8	7.6E-10	783301	27666	1803	13	0	1	73	0	14
15	CDD:cd02800	IPR004495	tRNA_bind_EcMetRS_like	558	663			783306	27666	1810	13	0	1	73	0	15
16	SUPERFAMILY:SSF50249	IPR012340	Nucleic acid-binding, OB-fold	561	662			783308	27666	405	13	0	1	73	0	16
17	PROSITE_PROFILES:PS50886	IPR002547	tRNA-binding domain profile.	562	663			783303	27666	1804	13	0	1	73	0	17
18	PFAM:PF01588	IPR002547	Putative tRNA binding domain	568	661	87.7	4.1E-25	783300	27666	1799	13	0	1	73	0	18

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