Cellulosome Database Search

This page is just for checking and is not meant to be part of the public site.

We will take the links to it out when ready.

Genome ifo

GCF_009913375.1: Bacillus velezensis, SRCM102744 [+] (ncbi)

Genbanks info:

Genbank_acc: WP_007408500.1:KAEKNHEO_02217
Genome uid: 97
2181788-2182549 [+] (253)

Sequence:

NVIVILAAILFLLMVIIGGKKGARSFIALFLNFGVLFLTIIFMTDPHINPIVLTLLSSAVICSITLFYINGGNVKTVTAF
ISAMLTIVLLLFFIMSVTKHTSIQGFGEEELGDIGIFTLFVGVDFVKVTAAMIIMGTIGAITDVAISITSPMREIYSHNP
SMSRKDLYTFGLSIGRDILGTNTNTLFFAFFGSYLALIIWFKDLSYSAEKIVNSKVFSAEAVTILCAGIGIGIIIPVTSW
ITACFLAKPNKR

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:SIGNAL_PEPTIDE_N_REGION		N-terminal region of a signal peptide.	0	2			726764	383030	21	135:all secretion /signal peptide, lipo	13	1	1	2125	3	1
2	PHOBIUS:SIGNAL_PEPTIDE		Signal peptide region	0	19			726761	383030	19	135:all secretion /signal peptide, lipo	13	0	1	2125	3	2
3	DeepTMHMM:outside		outside	1	2			777112	383030	10025	13	0	1	2125	0	3
4	PHOBIUS:SIGNAL_PEPTIDE_H_REGION		Hydrophobic region of a signal peptide.	2	14			726762	383030	24	135:all secretion /signal peptide, lipo	13	1	1	2125	3	4
5	PFAM:PF07907	IPR012507	YibE/F-like protein	3	244	229	0	726749	383030	5307	13	0	1	2125	0	5
6	DeepTMHMM:TMhelix		TMhelix	3	20			777114	383030	2056	141:DeepTMHMM: helix	13	0	1	2125	5	6
7	PHOBIUS:SIGNAL_PEPTIDE_C_REGION		C-terminal region of a signal peptide.	14	19			726763	383030	26	135:all secretion /signal peptide, lipo	13	1	1	2125	3	7
8	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	19	28			726752	383030	3	136:Membrane Protein	13	0	1	2125	0	8
9	DeepTMHMM:inside		inside	21	23			777116	383030	9730	13	0	1	2125	0	9
10	DeepTMHMM:TMhelix		TMhelix	24	44			777120	383030	2056	141:DeepTMHMM: helix	13	0	1	2125	5	10
11	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	28	45			726757	383030	5	136:Membrane Protein	13	0	1	2125	0	11
12	DeepTMHMM:outside		outside	45	51			777122	383030	10025	13	0	1	2125	0	12
13	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	45	51			726755	383030	18	136:Membrane Protein	13	0	1	2125	0	13
14	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	51	72			726756	383030	5	136:Membrane Protein	13	0	1	2125	0	14
15	DeepTMHMM:TMhelix		TMhelix	52	69			777124	383030	2056	141:DeepTMHMM: helix	13	0	1	2125	5	15
16	DeepTMHMM:inside		inside	70	78			777126	383030	9730	13	0	1	2125	0	16
17	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	72	77			726751	383030	3	136:Membrane Protein	13	0	1	2125	0	17
18	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	77	98			726759	383030	5	136:Membrane Protein	13	0	1	2125	0	18
19	DeepTMHMM:TMhelix		TMhelix	79	99			777128	383030	2056	141:DeepTMHMM: helix	13	0	1	2125	5	19
20	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	98	183			726754	383030	18	136:Membrane Protein	13	0	1	2125	0	20
21	DeepTMHMM:outside		outside	100	130			777130	383030	10025	13	0	1	2125	0	21
22	DeepTMHMM:TMhelix		TMhelix	131	146			777132	383030	2056	141:DeepTMHMM: helix	13	0	1	2125	5	22
23	DeepTMHMM:inside		inside	147	178			777134	383030	9730	13	0	1	2125	0	23
24	DeepTMHMM:TMhelix		TMhelix	179	200			777135	383030	2056	141:DeepTMHMM: helix	13	0	1	2125	5	24
25	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	183	202			726758	383030	5	136:Membrane Protein	13	0	1	2125	0	25
26	DeepTMHMM:outside		outside	201	221			777136	383030	10025	13	0	1	2125	0	26
27	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	202	221			726750	383030	3	136:Membrane Protein	13	0	1	2125	0	27
28	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	221	248			726760	383030	5	136:Membrane Protein	13	0	1	2125	0	28
29	DeepTMHMM:TMhelix		TMhelix	222	242			777137	383030	2056	141:DeepTMHMM: helix	13	0	1	2125	5	29
30	DeepTMHMM:inside		inside	243	253			777138	383030	9730	13	0	1	2125	0	30
31	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	248	253			726753	383030	18	136:Membrane Protein	13	0	1	2125	0	31

↑ Top