Cellulosome Database Search

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Genome ifo

GCF_019977655.1: Clostridium gelidum, C5S11 [+] (ncbi)

Genbanks info:

Genbank_acc: WP_224036174.1:PROKKA_00618
Genome uid: 133
643440-643808 [+] (122)

Sequence:

NKEMNKLLLHMVQYDLVSGLFISLVIGIISTFMNAGSYLAGISVATINFFVSGYVISKYLGQNKKQLFIIACYFLRMGFI
IISIIPFVKNTNRIVFYVIGFITHYIIMLIVFGIKNRKGSV

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	0	11			1767262	508781	18	136:Membrane Protein	15	0	1	563	0	1
2	DeepTMHMM:inside		inside	1	11			1785832	508781	9730	15	0	1	563	0	2
3	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	11	33			1767266	508781	5	136:Membrane Protein	15	0	1	563	0	3
4	DeepTMHMM:TMhelix		TMhelix	12	30			1785833	508781	2056	141:DeepTMHMM: helix	15	0	1	563	5	4
5	DeepTMHMM:outside		outside	31	38			1785834	508781	10025	15	0	1	563	0	5
6	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	33	38			1767267	508781	3	136:Membrane Protein	15	0	1	563	0	6
7	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	38	57			1767263	508781	5	136:Membrane Protein	15	0	1	563	0	7
8	DeepTMHMM:TMhelix		TMhelix	39	57			1785835	508781	2056	141:DeepTMHMM: helix	15	0	1	563	5	8
9	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	57	68			1767261	508781	18	136:Membrane Protein	15	0	1	563	0	9
10	DeepTMHMM:inside		inside	58	67			1785836	508781	9730	15	0	1	563	0	10
11	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	68	89			1767265	508781	5	136:Membrane Protein	15	0	1	563	0	11
12	DeepTMHMM:TMhelix		TMhelix	68	89			1785837	508781	2056	141:DeepTMHMM: helix	15	0	1	563	5	12
13	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	89	94			1767269	508781	3	136:Membrane Protein	15	0	1	563	0	13
14	DeepTMHMM:outside		outside	90	94			1785838	508781	10025	15	0	1	563	0	14
15	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	94	115			1767264	508781	5	136:Membrane Protein	15	0	1	563	0	15
16	DeepTMHMM:TMhelix		TMhelix	95	115			1785839	508781	2056	141:DeepTMHMM: helix	15	0	1	563	5	16
17	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	115	122			1767260	508781	18	136:Membrane Protein	15	0	1	563	0	17
18	DeepTMHMM:inside		inside	116	122			1785840	508781	9730	15	0	1	563	0	18

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