Cellulosome Database Search

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Genome ifo

GCF_019977655.1: Clostridium gelidum, C5S11 [+] (ncbi)

Genbanks info:

Genbank_acc: PROKKA_01372
Genome uid: 133
1524324-1525811 [+] (495)

Sequence:

VVHENITYSVNIKCKGGFQLKSIGNLCEKTKQIYNDIHQMNKVSELLDYISEKSIEKVAAFLLIIWVLSPIIVMFSSISV
QDVEQSLNFSLKQVAISTCWYEILQTTGFLGCILGIIVFFKNILKGKTGEISMKQYVKNNLFTLFLFFMLFWSILSCLVS
DNIAISFYGTSYRNDGLVTYFTYCGIFCCGYVVRNKRFAKHILEIFTISATVLSILMLMNSETINNLLGLTVDSSVFSNS
NHFAYYLCMAVMCALLLFETEKKSAPKLIFRIGIFSVITAALVYNKSLGPYLAVVVGLVCSVILIIWLDKKDLKRVLVAV
IVFIIVTFIMNISDNHLYIDLKIFGIDIFKIAKLSPAKDLAHVGSDRWPLWMNGLRFITEKPFFGYGPDNLGAQYAKVNI
IIDRPHNEFIQFAASLGIPALVSYIMALAVHFISFLKQRKHVSVVYIGILCTVITYLASSMFGNTMYYTSPFFFMILGLS
ASMQKLVEAKKKEL

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	0	58			1855028	511232	18	136:Membrane Protein	15	0	1	1313	0	1
2	DeepTMHMM:inside		inside	1	58			1855791	511232	9730	15	0	1	1313	0	2
3	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	58	81			1854996	511232	5	136:Membrane Protein	15	0	1	1313	0	3
4	DeepTMHMM:TMhelix		TMhelix	59	76			1855792	511232	2056	141:DeepTMHMM: helix	15	0	1	1313	5	4
5	DeepTMHMM:outside		outside	77	103			1855793	511232	10025	15	0	1	1313	0	5
6	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	81	100			1854990	511232	3	136:Membrane Protein	15	0	1	1313	0	6
7	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	100	121			1854995	511232	5	136:Membrane Protein	15	0	1	1313	0	7
8	DeepTMHMM:TMhelix		TMhelix	104	121			1855803	511232	2056	141:DeepTMHMM: helix	15	0	1	1313	5	8
9	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	121	141			1855032	511232	18	136:Membrane Protein	15	0	1	1313	0	9
10	DeepTMHMM:inside		inside	122	141			1855804	511232	9730	15	0	1	1313	0	10
11	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	141	166			1854993	511232	5	136:Membrane Protein	15	0	1	1313	0	11
12	DeepTMHMM:TMhelix		TMhelix	142	160			1855805	511232	2056	141:DeepTMHMM: helix	15	0	1	1313	5	12
13	DeepTMHMM:outside		outside	161	177			1855806	511232	10025	15	0	1	1313	0	13
14	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	166	177			1854986	511232	3	136:Membrane Protein	15	0	1	1313	0	14
15	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	177	194			1854997	511232	5	136:Membrane Protein	15	0	1	1313	0	15
16	DeepTMHMM:TMhelix		TMhelix	178	189			1855807	511232	2056	141:DeepTMHMM: helix	15	0	1	1313	5	16
17	DeepTMHMM:inside		inside	190	202			1855808	511232	9730	15	0	1	1313	0	17
18	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	194	205			1855030	511232	18	136:Membrane Protein	15	0	1	1313	0	18
19	DeepTMHMM:TMhelix		TMhelix	203	219			1855809	511232	2056	141:DeepTMHMM: helix	15	0	1	1313	5	19
20	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	205	224			1854994	511232	5	136:Membrane Protein	15	0	1	1313	0	20
21	DeepTMHMM:outside		outside	220	243			1855810	511232	10025	15	0	1	1313	0	21
22	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	224	243			1854988	511232	3	136:Membrane Protein	15	0	1	1313	0	22
23	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	243	262			1854991	511232	5	136:Membrane Protein	15	0	1	1313	0	23
24	DeepTMHMM:TMhelix		TMhelix	244	259			1855811	511232	2056	141:DeepTMHMM: helix	15	0	1	1313	5	24
25	DeepTMHMM:inside		inside	260	268			1855812	511232	9730	15	0	1	1313	0	25
26	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	262	268			1855003	511232	18	136:Membrane Protein	15	0	1	1313	0	26
27	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	268	285			1854992	511232	5	136:Membrane Protein	15	0	1	1313	0	27
28	DeepTMHMM:TMhelix		TMhelix	269	285			1855813	511232	2056	141:DeepTMHMM: helix	15	0	1	1313	5	28
29	PFAM:PF04932	IPR007016	O-Antigen ligase	276	426	64.8	6.5E-18	1854969	511232	2349	15	0	1	1313	0	29
30	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	285	290			1854987	511232	3	136:Membrane Protein	15	0	1	1313	0	30
31	DeepTMHMM:outside		outside	286	291			1855814	511232	10025	15	0	1	1313	0	31
32	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	290	309			1854998	511232	5	136:Membrane Protein	15	0	1	1313	0	32
33	DeepTMHMM:TMhelix		TMhelix	292	308			1855815	511232	2056	141:DeepTMHMM: helix	15	0	1	1313	5	33
34	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	309	315			1855029	511232	18	136:Membrane Protein	15	0	1	1313	0	34
35	DeepTMHMM:inside		inside	309	316			1855816	511232	9730	15	0	1	1313	0	35
36	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	315	333			1854999	511232	5	136:Membrane Protein	15	0	1	1313	0	36
37	DeepTMHMM:TMhelix		TMhelix	317	335			1855817	511232	2056	141:DeepTMHMM: helix	15	0	1	1313	5	37
38	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	333	409			1854970	511232	3	136:Membrane Protein	15	0	1	1313	0	38
39	DeepTMHMM:outside		outside	336	418			1855818	511232	10025	15	0	1	1313	0	39
40	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	409	433			1855001	511232	5	136:Membrane Protein	15	0	1	1313	0	40
41	DeepTMHMM:TMhelix		TMhelix	419	437			1855819	511232	2056	141:DeepTMHMM: helix	15	0	1	1313	5	41
42	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	433	444			1855031	511232	18	136:Membrane Protein	15	0	1	1313	0	42
43	DeepTMHMM:inside		inside	438	444			1855821	511232	9730	15	0	1	1313	0	43
44	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	444	463			1855002	511232	5	136:Membrane Protein	15	0	1	1313	0	44
45	DeepTMHMM:TMhelix		TMhelix	445	465			1855823	511232	2056	141:DeepTMHMM: helix	15	0	1	1313	5	45
46	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	463	468			1854989	511232	3	136:Membrane Protein	15	0	1	1313	0	46
47	DeepTMHMM:outside		outside	466	466			1855825	511232	10025	15	0	1	1313	0	47
48	DeepTMHMM:TMhelix		TMhelix	467	484			1855827	511232	2056	141:DeepTMHMM: helix	15	0	1	1313	5	48
49	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	468	488			1855000	511232	5	136:Membrane Protein	15	0	1	1313	0	49
50	DeepTMHMM:inside		inside	485	495			1855829	511232	9730	15	0	1	1313	0	50
51	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	488	495			1855004	511232	18	136:Membrane Protein	15	0	1	1313	0	51

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