Cellulosome Database Search

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Genome ifo

637000316: Syntrophomonas wolfei subsp. wolfei, Goettingen [+] (IMG)

Genbanks info:

Genbank_acc: Ga0065332_111128:GJLLLGJL_01105
Genome uid: 23
1230619-1235022 [+] (1467)

Sequence:

TGNKINGITRFLKRKRSFYPVLLAMIFLLNTSIAAYALPVEAPTADPPAGTYGGKQNVELKTETVAASVYYTTDGADPTT
SSTLYTNLIEIPSNMTIKAIATDGTDSSSISTFEYVLFAGGDGSVDNPYQVATAEQLNNVRYHLDKHFIQTEDINLNIAP
YNEDTGWEPIGNEWYQFTGTFDGNGKIISKLTIKSTGRYVGLFGFTNGSHIKNVKLENVNVTGDYQVGSLVGDNKYGEIT
NSYATGAVTGTDHVGGLVGENYFGTITRSYATVTVTGTNYVGGLVASNDCGEITNSYATGAVTGTDHVGGLVGENWGTIT
CSYATGAVTGTHYIGGLVGDNKYGEITNSYATGAVTGTNYVGGLVGWNGDSTISYTYATGTVKGTSDVGGLVGINDQGTV
SKSYWDTTISGTAFSAGGEGVAGKSTEDMKLQGTYVDWDFADIWNIKDGKNDDYPFLKNNPPGSFVKSTITVADVVGGTA
TVKTNPALEAAEGLTVTVNIANIEAGKRFKSITVIDVYNEAVTITTVTAGKSYTFNMPANDVTVTVEVEPILFAGGSGTE
EDPYQVATAVQLDSVRYLLDKHFKQTADIDLSSYNTGLGWEPIGDWDSPFIGAFDGKYNTISNLTINRSTTDYVGLFGFA
EGAQIKNVKLENVNVTGSEGVGGLVGENSGTITNSYATGAVTGVNYYVGGLVGWNYGEIANSYASGTIAGTEDVGGLVGG
NDGEITNSYASGTISGTEYVGGLVGINIGAITNSYTTGAVTGTGNIFGGLVGINNQGTVTNSYWDTDTSGTKSSAGGTGK
TEAQMKQQETYEGWDFIDIWNIEGSRNNGYPFLKNNPPVETLISITSPSAITGIANGTTKTAAALGLPAKVTLVTNGGNA
EADVSWDVAACSYNPAVTTEQTFTVSGTVTLPTGVVNPNSVPLTTSISVTVNARPSPPPPWYPVSGVTLDKSSLTLEVNG
PAQKLAATVQPSYASNPYVYWNSSDTEVARVDYTGLVTPVAPGQAIITATTSEGGKTASCTVEVLARIEGIKLNKASTTI
TEGNSETLKATLIPENSKQNISWSSDDSSIATVDSEGLVTGISPGTTFITVRTVEGDFSANCTVTVMATITATAEETIVL
HDEPVSINIPPEVEATIEVTPGSTMPQVNINSSTALGTVEIQIPEGTIASSPDDWDGTLKLPTISSQPSVNINGASQVNM
VIVLGLEDEQISFSQAVRILIPGQAQQQVGYIRNGVFTPITRILSADRQDVADSEIPADGDGKIDVDSDLAVWTKHFTEF
VTYTPISNPEPVSYTVSLSSNYAKAGTVSGDGTFYGGSLITVRAQAQSGYVFDNWSENGCMLSRDSVYSFNLGNSSRQLQ
ANFVREFQEISITDATKPRIITFSHPVLPGEQNLGNIYVATDINGDNKVEGVIVAGVSGNNCQISVKPPGGQWLAGASYY
LILEPGLQSALNKTLGIRTRMKFTVE

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	0	19			795844	52614	18	136:Membrane Protein	15	0	1	1087	0	1
2	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	19	39			795845	52614	5	136:Membrane Protein	15	0	1	1087	0	2
3	SIGNALP6:SP		SP	38	39	0		808966	52614	1978	135:all secretion /signal peptide, lipo	15	0	1	1087	0	3
4	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	39	1467			795843	52614	3	136:Membrane Protein	15	0	1	1087	0	4
5	PFAM:PF13290		Chitobiase/beta-hexosaminidase C-terminal domain	47	110	68.1	5.0E-19	795821	52614	4375	15	0	1	1087	0	5
6	PFAM:PF07581	IPR011493	The GLUG motif	253	277	20.5	0.00044	795827	52614	6273	15	0	1	1087	0	6
7	PFAM:PF07581	IPR011493	The GLUG motif	277	304	18.5	0.0019	795825	52614	6273	15	0	1	1087	0	7
8	PFAM:PF07581	IPR011493	The GLUG motif	330	357	19.8	0.0007	795828	52614	6273	15	0	1	1087	0	8
9	PFAM:PF07581	IPR011493	The GLUG motif	357	383	20.7	0.00038	795842	52614	6273	15	0	1	1087	0	9
10	PFAM:PF07581	IPR011493	The GLUG motif	657	683	19.5	0.0009	795826	52614	6273	15	0	1	1087	0	10
11	PFAM:PF07581	IPR011493	The GLUG motif	685	709	25.3	1.2E-5	795829	52614	6273	15	0	1	1087	0	11
12	PFAM:PF07581	IPR011493	The GLUG motif	711	736	23	7.0E-5	795830	52614	6273	15	0	1	1087	0	12
13	SUPERFAMILY:SSF49373	IPR008964	Invasin/intimin cell-adhesion fragments	941	1025			795848	52614	987	19:CBM6	15	0	1	1087	4	13
14	SMART:SM00635	IPR003343		943	1022			795819	52614	1	15	0	1	1087	0	14
15	PFAM:PF02368	IPR003343	Bacterial Ig-like domain (group 2)	944	1023	56.1	2.5E-15	795822	52614	3251	15	0	1	1087	0	15
16	SUPERFAMILY:SSF49373	IPR008964	Invasin/intimin cell-adhesion fragments	1027	1107			795846	52614	987	19:CBM6	15	1	1	1087	4	16
17	SMART:SM00635	IPR003343		1027	1104			795820	52614	1	15	0	1	1087	0	17
18	PFAM:PF02368	IPR003343	Bacterial Ig-like domain (group 2)	1030	1105	51.8	5.5E-14	795823	52614	3251	15	0	1	1087	0	18
19	PFAM:PF18998	IPR044060	Divergent InlB B-repeat domain	1297	1365	37.8	1.5E-9	795824	52614	2382	15	0	1	1087	0	19

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