Cellulosome Database Search

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Genome ifo

GCF_900112775.1: Anaeromicropila populeti, 743A [+] (ncbi)

Genbanks info:

Genbank_acc: WP_242940561.1:PROKKA_02488
Genome uid: 144
59721-60353 [+] (210)

Sequence:

ILKLIACIVIGYLLGSFSTGYVVGKMNHINIHEEGSGNSGATNALRTMGIKAGLFTFLGDLLKGLLPVIVVRILFHKQPD
MGVYFGLVIGLAAVLGHNFPFWLNFKGGKGIAVTSAVILGIADWRVTLVGLILFILIVASTRYVSLGSLMVAWLLPVNML
LFCRDSEYFLHMLIVSLLFTLLAYVRHASNIKRLLNGTERKFGVKSKNK

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:SIGNAL_PEPTIDE_N_REGION		N-terminal region of a signal peptide.	0	4			2217191	584632	21	135:all secretion /signal peptide, lipo	13	1	1	1217	3	1
2	PHOBIUS:SIGNAL_PEPTIDE		Signal peptide region	0	21			2217205	584632	19	135:all secretion /signal peptide, lipo	13	0	1	1217	3	2
3	DeepTMHMM:outside		outside	1	4			2300481	584632	10025	13	0	1	1217	0	3
4	PHOBIUS:SIGNAL_PEPTIDE_H_REGION		Hydrophobic region of a signal peptide.	4	16			2217203	584632	24	135:all secretion /signal peptide, lipo	13	1	1	1217	3	4
5	DeepTMHMM:TMhelix		TMhelix	5	25			2300483	584632	2056	141:DeepTMHMM: helix	13	0	1	1217	5	5
6	SMART:SM01207	IPR003811		9	196			2217189	584632	1	13	0	1	1217	0	6
7	PFAM:PF02660	IPR003811	Glycerol-3-phosphate acyltransferase	10	195	177.4	0	2217190	584632	1196	13	0	1	1217	0	7
8	PHOBIUS:SIGNAL_PEPTIDE_C_REGION		C-terminal region of a signal peptide.	16	21			2217206	584632	26	135:all secretion /signal peptide, lipo	13	1	1	1217	3	8
9	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	21	52			2217200	584632	3	136:Membrane Protein	13	0	1	1217	0	9
10	DeepTMHMM:inside		inside	26	54			2300485	584632	9730	13	0	1	1217	0	10
11	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	52	76			2217195	584632	5	136:Membrane Protein	13	0	1	1217	0	11
12	DeepTMHMM:TMhelix		TMhelix	55	75			2300487	584632	2056	141:DeepTMHMM: helix	13	0	1	1217	5	12
13	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	76	82			2217199	584632	18	136:Membrane Protein	13	0	1	1217	0	13
14	DeepTMHMM:outside		outside	76	83			2300489	584632	10025	13	0	1	1217	0	14
15	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	82	106			2217192	584632	5	136:Membrane Protein	13	0	1	1217	0	15
16	DeepTMHMM:TMhelix		TMhelix	84	101			2300491	584632	2056	141:DeepTMHMM: helix	13	0	1	1217	5	16
17	DeepTMHMM:inside		inside	102	110			2300493	584632	9730	13	0	1	1217	0	17
18	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	106	111			2217201	584632	3	136:Membrane Protein	13	0	1	1217	0	18
19	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	111	137			2217196	584632	5	136:Membrane Protein	13	0	1	1217	0	19
20	DeepTMHMM:TMhelix		TMhelix	111	123			2300495	584632	2056	141:DeepTMHMM: helix	13	0	1	1217	5	20
21	DeepTMHMM:outside		outside	124	124			2300497	584632	10025	13	0	1	1217	0	21
22	DeepTMHMM:TMhelix		TMhelix	125	142			2300499	584632	2056	141:DeepTMHMM: helix	13	0	1	1217	5	22
23	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	137	143			2217198	584632	18	136:Membrane Protein	13	0	1	1217	0	23
24	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	143	163			2217194	584632	5	136:Membrane Protein	13	0	1	1217	0	24
25	DeepTMHMM:inside		inside	143	146			2300501	584632	9730	13	0	1	1217	0	25
26	DeepTMHMM:TMhelix		TMhelix	147	163			2300504	584632	2056	141:DeepTMHMM: helix	13	0	1	1217	5	26
27	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	163	168			2217202	584632	3	136:Membrane Protein	13	0	1	1217	0	27
28	DeepTMHMM:outside		outside	164	168			2300530	584632	10025	13	0	1	1217	0	28
29	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	168	186			2217193	584632	5	136:Membrane Protein	13	0	1	1217	0	29
30	DeepTMHMM:TMhelix		TMhelix	169	186			2300534	584632	2056	141:DeepTMHMM: helix	13	0	1	1217	5	30
31	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	186	210			2217197	584632	18	136:Membrane Protein	13	0	1	1217	0	31
32	DeepTMHMM:inside		inside	187	210			2300536	584632	9730	13	0	1	1217	0	32

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