Cellulosome Database Search

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Genome ifo

Gs0159231: Syntrophomonas erecta sporosyntropha, JCM 13344 [-] (ncbi)

Genbanks info:

Genbank_acc: PROKKA_00178
Genome uid: 222
175695-176783 [+] (362)

Sequence:

SKIDMENIGLSQRFITESALYPSHCIGRVISQYKDLYKVVTENGESTAEISGKFRFDIKTLSGYPAVGDFVMLDRNEDTG
GNAIIHHVLTRKSVFIRKAAGTSNDEQVVASNIDTVFICMSLNNDYNLRRVERYLAIAWDSGAVPVIVLTKADLCDNIPQ
KLLELDSVACGVDVLVTSSLTADGCISVQSYFGSGKTIAFIGSSGVGKSTLINKLIGQNALQTQEIRNDDKGRHTTTRRE
LIVIPSGGVVIDTPGMRELGIESANLTKAFADIDELATKCKFRDCTHTSEPNCAVQKAINDGLLSADRLANYLKLKKEAK
YEGLNSKQIETEKLNAMFAEMGGMKNAREFIKEKNKRRRGF

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	0	11			2007054	941419	3	136:Membrane Protein	0	0	1	176	0	1
2	PHOBIUS:SIGNAL_PEPTIDE_N_REGION		N-terminal region of a signal peptide.	0	9			2710801	941419	21	135:all secretion /signal peptide, lipo	0	0	0	176	3	2
3	PHOBIUS:SIGNAL_PEPTIDE		Signal peptide region	0	18			2673694	941419	19	135:all secretion /signal peptide, lipo	0	0	0	176	3	3
4	PHOBIUS:SIGNAL_PEPTIDE_N_REGION		N-terminal region of a signal peptide.	0	6			2673695	941419	21	135:all secretion /signal peptide, lipo	0	0	0	176	3	4
5	PHOBIUS:SIGNAL_PEPTIDE		Signal peptide region	0	29			2710798	941419	19	135:all secretion /signal peptide, lipo	0	0	0	176	3	5
6	DeepTMHMM:outside		outside	1	15			2025671	941419	10025	0	0	1	176	0	6
7	DeepTMHMM:inside		inside	1	2732			1581497	941419	9730	0	0	1	176	0	7
8	SUPERFAMILY:SSF53098	IPR012337	Ribonuclease H-like superfamily	4	159			2520727	941419	34	0	0	0	176	0	8
9	PFAM:PF02075	IPR002176	Crossover junction endodeoxyribonuclease RuvC	5	154	167.6	0	2520725	941419	254	0	0	0	176	0	9
10	CDD:cd16962	IPR002176	RuvC	5	157			2520726	941419	255	0	0	0	176	0	10
11	PFAM:PF08990	IPR015083	Erythronolide synthase docking domain	5	30	28.8	7.1E-7	1548364	941419	15053	0	0	1	176	0	11
12	PRINTS:PR00696	IPR002176	Crossover junction endodeoxyribonuclease RUVC signature	6	20			2520722	941419	253	0	0	0	176	0	12
13	PHOBIUS:SIGNAL_PEPTIDE_H_REGION		Hydrophobic region of a signal peptide.	6	13			2673696	941419	24	135:all secretion /signal peptide, lipo	0	0	0	176	3	13
14	PHOBIUS:SIGNAL_PEPTIDE_H_REGION		Hydrophobic region of a signal peptide.	9	21			2710799	941419	24	135:all secretion /signal peptide, lipo	0	0	0	176	3	14
15	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	11	42			2007051	941419	5	136:Membrane Protein	0	0	1	176	0	15
16	PHOBIUS:SIGNAL_PEPTIDE_C_REGION		C-terminal region of a signal peptide.	13	18			2673693	941419	26	135:all secretion /signal peptide, lipo	0	0	0	176	3	16
17	DeepTMHMM:TMhelix		TMhelix	16	33			2025672	941419	2056	141:DeepTMHMM: helix	0	0	1	176	6	17
18	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	18	88			2673697	941419	3	136:Membrane Protein	0	0	0	176	0	18
19	PFAM:PF02683	IPR003834	Cytochrome C biogenesis protein transmembrane region	19	228	150.6	5.74532E-44	2007046	941419	1928	137:Transmembrane	0	0	1	176	0	19
20	PHOBIUS:SIGNAL_PEPTIDE_C_REGION		C-terminal region of a signal peptide.	21	29			2710800	941419	26	135:all secretion /signal peptide, lipo	0	0	0	176	3	20
21	SUPERFAMILY:SSF50249	IPR012340	Nucleic acid-binding, OB-fold	26	93			2729283	941419	405	0	0	0	176	0	21
22	PROSITE_PROFILES:PS51272	IPR001119	S-layer homology (SLH) domain profile.	27	85			2710802	941419	317	225:S-layer Homology:PROSITE	0	0	0	176	0	22
23	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	29	757			2710797	941419	3	136:Membrane Protein	0	0	0	176	0	23
24	SIGNALP6:SP		SP	29	30	0		2710871	941419	1978	135:all secretion /signal peptide, lipo	0	0	0	176	3	24
25	SUPERFAMILY:SSF53901	IPR016039	Thiolase-like	30	401			1548375	941419	696	0	0	1	176	0	25
26	PFAM:PF00395	IPR001119	S-layer homology domain	33	74	55.3	4.8E-15	2710793	941419	315	4:S-layer Homology:PFAM	0	0	0	176	0	26
27	CDD:cd00833		PKS	33	457			1548369	941419	2143	0	0	1	176	0	27
28	PFAM:PF00109	IPR014030	Beta-ketoacyl synthase, N-terminal domain	33	284	308.1	0	1548314	941419	2142	0	0	1	176	0	28
29	DeepTMHMM:inside		inside	34	67			2025673	941419	9730	0	0	1	176	0	29
30	SMART:SM00825	IPR020841	Beta-ketoacyl synthase	35	462			1548304	941419	2137	0	0	1	176	0	30
31	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	42	62			2007059	941419	18	136:Membrane Protein	0	0	1	176	0	31
32	SUPERFAMILY:SSF53756		-	47	362			851400	941419	12	0	0	1	176	0	32
33	CDD:cd03801		GT4_PimA-like	50	347			851399	941419	299	0	0	1	176	0	33
34	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	62	92			2007050	941419	5	136:Membrane Protein	0	0	1	176	0	34
35	PRINTS:PR00696	IPR002176	Crossover junction endodeoxyribonuclease RUVC signature	63	80			2520723	941419	253	0	0	0	176	0	35
36	DeepTMHMM:TMhelix		TMhelix	68	85			2025674	941419	2056	141:DeepTMHMM: helix	0	0	1	176	6	36
37	PRINTS:PR00696	IPR002176	Crossover junction endodeoxyribonuclease RUVC signature	85	102			2520724	941419	253	0	0	0	176	0	37
38	PROSITE_PROFILES:PS51272	IPR001119	S-layer homology (SLH) domain profile.	85	149			2710804	941419	317	225:S-layer Homology:PROSITE	0	0	0	176	0	38
39	DeepTMHMM:outside		outside	86	98			2025675	941419	10025	0	0	1	176	0	39
40	PFAM:PF03193	IPR010914	RsgA GTPase	88	262	158.3	0	2729279	941419	690	0	0	0	176	0	40
41	PFAM:PF00395	IPR001119	S-layer homology domain	90	132	52	5.0E-14	2710795	941419	315	4:S-layer Homology:PFAM	0	0	0	176	0	41
42	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	92	97			2007053	941419	3	136:Membrane Protein	0	0	1	176	0	42
43	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	97	120			2007047	941419	5	136:Membrane Protein	0	0	1	176	0	43
44	DeepTMHMM:TMhelix		TMhelix	99	115			2025676	941419	2056	141:DeepTMHMM: helix	0	0	1	176	6	44
45	PROSITE_PROFILES:PS51721	IPR030378	Circularly permuted (CP)-type guanine nucleotide-binding (G) domain profile.	103	260			2729281	941419	634	0	0	0	176	0	45
46	SUPERFAMILY:SSF52540	IPR027417	P-loop containing nucleoside triphosphate hydrolase	106	322			2729284	941419	78	0	0	0	176	0	46
47	PRINTS:PR00696	IPR002176	Crossover junction endodeoxyribonuclease RUVC signature	109	129			2520721	941419	253	0	0	0	176	0	47
48	CDD:cd01854	IPR004881	YjeQ_EngC	111	318			2729282	941419	692	0	0	0	176	0	48
49	PROSITE_PROFILES:PS50936	IPR010914	EngC GTPase domain profile.	111	258			2729280	941419	691	0	0	0	176	0	49
50	DeepTMHMM:inside		inside	116	139			2025677	941419	9730	0	0	1	176	0	50
51	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	120	131			2007058	941419	18	136:Membrane Protein	0	0	1	176	0	51
52	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	131	150			2007048	941419	5	136:Membrane Protein	0	0	1	176	0	52
53	DeepTMHMM:TMhelix		TMhelix	140	149			2025678	941419	2056	141:DeepTMHMM: helix	0	0	1	176	6	53
54	PRINTS:PR00696	IPR002176	Crossover junction endodeoxyribonuclease RUVC signature	141	154			2520720	941419	253	0	0	0	176	0	54
55	PROSITE_PROFILES:PS51272	IPR001119	S-layer homology (SLH) domain profile.	149	210			2710803	941419	317	225:S-layer Homology:PROSITE	0	0	0	176	0	55
56	PFAM:PF00395	IPR001119	S-layer homology domain	149	193	46.4	2.9E-12	2710794	941419	315	4:S-layer Homology:PFAM	0	0	0	176	0	56
57	DeepTMHMM:outside		outside	150	173			2025679	941419	10025	0	0	1	176	0	57
58	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	150	169			2007055	941419	3	136:Membrane Protein	0	0	1	176	0	58
59	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	169	199			2007049	941419	5	136:Membrane Protein	0	0	1	176	0	59
60	DeepTMHMM:TMhelix		TMhelix	174	194			2025680	941419	2056	141:DeepTMHMM: helix	0	0	1	176	6	60
61	PFAM:PF00534	IPR001296	Glycosyl transferases group 1	178	339	119.4	1.1E-34	851398	941419	249	0	0	1	176	0	61
62	DeepTMHMM:inside		inside	195	213			2025681	941419	9730	0	0	1	176	0	62
63	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	199	210			2007057	941419	18	136:Membrane Protein	0	0	1	176	0	63
64	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	210	235			2007052	941419	5	136:Membrane Protein	0	0	1	176	0	64
65	DeepTMHMM:TMhelix		TMhelix	214	226			2025682	941419	2056	141:DeepTMHMM: helix	0	0	1	176	6	65
66	DeepTMHMM:outside		outside	227	250			2025683	941419	10025	0	0	1	176	0	66
67	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	235	250			2007056	941419	3	136:Membrane Protein	0	0	1	176	0	67
68	PFAM:PF02801	IPR014031	Beta-ketoacyl synthase, C-terminal domain	291	409	138.5	9.40005E-41	1548360	941419	2139	0	0	1	176	0	68
69	PFAM:PF13290		Chitobiase/beta-hexosaminidase C-terminal domain	388	454	74.6	4.5E-21	2710796	941419	4375	0	0	0	176	0	69
70	PFAM:PF16197	IPR032821	Ketoacyl-synthetase C-terminal extension	411	542	51.4	1.3E-13	1548356	941419	3784	0	0	1	176	0	70
71	SUPERFAMILY:SSF52151	IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase	577	868			1548390	941419	1361	0	0	1	176	0	71
72	PFAM:PF00698	IPR014043	Acyl transferase domain	580	897	266	0	1548363	941419	1521	0	0	1	176	0	72
73	SMART:SM00827	IPR014043	Acyl transferase domain in polyketide synthase (PKS) enzymes.	581	880			1548308	941419	1520	0	0	1	176	0	73
74	SUPERFAMILY:SSF55048	IPR016036	Malonyl-CoA ACP transacylase, ACP-binding	705	767			1548392	941419	1522	0	0	1	176	0	74
75	SMART:SM00826	IPR020807		946	1109			1548311	941419	1	0	0	1	176	0	75
76	PFAM:PF14765	IPR020807	Polyketide synthase dehydratase	946	1214	159.9	0	1548355	941419	2141	0	0	1	176	0	76
77	SUPERFAMILY:SSF47336	IPR036736	ACP-like superfamily	1269	1386			1548372	941419	73	0	0	1	176	0	77
78	PROSITE_PROFILES:PS50075	IPR009081	Carrier protein (CP) domain profile.	1271	1347			1548365	941419	71	0	0	1	176	0	78
79	SMART:SM00823	IPR020806	Phosphopantetheine attachment site	1274	1347			1548309	941419	68	0	0	1	176	0	79
80	SMART:SM01294			1275	1343			1548306	941419	1	0	0	1	176	0	80
81	PFAM:PF00550	IPR009081	Phosphopantetheine attachment site	1277	1343	44.5	1.4E-11	1548312	941419	68	0	0	1	176	0	81
82	SUPERFAMILY:SSF53901	IPR016039	Thiolase-like	1366	1730			1548388	941419	696	0	0	1	176	0	82
83	PFAM:PF00109	IPR014030	Beta-ketoacyl synthase, N-terminal domain	1370	1608	277.1	0	1548313	941419	2142	0	0	1	176	0	83
84	CDD:cd00833		PKS	1370	1779			1548367	941419	2143	0	0	1	176	0	84
85	SMART:SM00825	IPR020841	Beta-ketoacyl synthase	1372	1784			1548305	941419	2137	0	0	1	176	0	85
86	PFAM:PF02801	IPR014031	Beta-ketoacyl synthase, C-terminal domain	1615	1731	146.7	2.8026E-43	1548358	941419	2139	0	0	1	176	0	86
87	PFAM:PF16197	IPR032821	Ketoacyl-synthetase C-terminal extension	1733	1868	64.2	1.3E-17	1548357	941419	3784	0	0	1	176	0	87
88	SUPERFAMILY:SSF52151	IPR016035	Acyl transferase/acyl hydrolase/lysophospholipase	1902	2192			1548389	941419	1361	0	0	1	176	0	88
89	PFAM:PF00698	IPR014043	Acyl transferase domain	1905	2224	186.1	0	1548362	941419	1521	0	0	1	176	0	89
90	SMART:SM00827	IPR014043	Acyl transferase domain in polyketide synthase (PKS) enzymes.	1905	2207			1548307	941419	1520	0	0	1	176	0	90
91	SUPERFAMILY:SSF55048	IPR016036	Malonyl-CoA ACP transacylase, ACP-binding	2033	2097			1548391	941419	1522	0	0	1	176	0	91
92	PFAM:PF14765	IPR020807	Polyketide synthase dehydratase	2275	2543	187.6	0	1548315	941419	2141	0	0	1	176	0	92
93	SMART:SM00826	IPR020807		2275	2437			1548310	941419	1	0	0	1	176	0	93
94	SUPERFAMILY:SSF51735	IPR036291	NAD(P)-binding domain superfamily	2552	2743			1548370	941419	206	0	0	1	176	0	94
95	DeepTMHMM:TMhelix		TMhelix	2733	2742			1581498	941419	2056	141:DeepTMHMM: helix	0	0	1	176	6	95
96	DeepTMHMM:outside		outside	2743	3227			1581499	941419	10025	0	0	1	176	0	96

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