Cellulosome Database Search

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Genome ifo

GCF_003208175.1: Ruminiclostridium sufflavum, DSM 19573 [+] (ncbi)

Genbanks info:

Genbank_acc: WP_242981216.1:FCBLKBGM_02057
Genome uid: 31
69879-72263 [+] (794)

Sequence:

KDLSVCVKRPLCLFCMSFIAGIILCCNAGLTLLLIFLIPCLFICIIFFSRLKNIICITLAALIFFTLGGVIFNNAQRKYY
GAFNEVYDKPVTVEGYIAGEIEKKDNLIKFYLKTNKITYLKNEIKAAGKLLVSVSEENRAFDTNKIKYRTELSFSGSIEN
PKTMTNPGGFDYKRYLAAAGVSGTVYLKGGADLCLIGVKDGGWLHKLGFGIKNFVLRLVEQCLDEKQAGLLAGMLIGYKD
GLDENAYNAFGKAGLTHIMVASGMNVAFIILPLLYIFKKIHIGNIASSIMAIAVLLLFVFVAGFSASVVRAVIMGILILL
GKAVMRETDIYTSISAAAVVLLLINPYTLFDIGFQLSFSATLALVMFYPGIKAFIDRRPLPEIISDTLAATIAAQIGVVP
ITLYYFNNFSTISVLSNLLVVPVVQLITIIGFAMVFAGLASINLAVLIGCVNNTFLSFVLFVTEYTSKIPYASLKLPTPP
VWMIILYYSAVLYFLKGRLYIKNFKYYRYLKYICITLAVIIIMVCNLLPKPLRITFLDVGQGDGAFIKTAHGRKLFIDGG
GRAAGSKSGYDVGEAVVVPYILDQGTKKIDIVIATHGHSDHTEGLEAILKEIEVGRVILPDTDGKGFERIIEICGQKKIS
VAECKKGDIIRLDKDTVLDVLNPLSFEKDSLSQQSLNDSSLVLKLRYKNSKVLFQGDAEIPVEQRLLEQGSDLSADILKV
GHHGSFSSTGEAFVKGSIFKYAVISVGRNNFGHPSPLVIDRLEERGTLPLRTDERGAVIAVSYGEGFSIKTMR

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	0	19			961214	94190	18	136:Membrane Protein	15	0	1	1835	0	1
2	DeepTMHMM:inside		inside	1	11			997983	94190	9730	15	0	1	1835	0	2
3	DeepTMHMM:TMhelix		TMhelix	12	29			997984	94190	2056	141:DeepTMHMM: helix	15	0	1	1835	5	3
4	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	19	49			961221	94190	5	136:Membrane Protein	15	0	1	1835	0	4
5	PFAM:PF13567	IPR025405	Domain of unknown function (DUF4131)	29	192	91.2	5.6E-26	961209	94190	3446	15	0	1	1835	0	5
6	DeepTMHMM:outside		outside	30	32			997985	94190	10025	15	0	1	1835	0	6
7	DeepTMHMM:TMhelix		TMhelix	33	48			997986	94190	2056	141:DeepTMHMM: helix	15	0	1	1835	5	7
8	DeepTMHMM:inside		inside	49	54			997987	94190	9730	15	0	1	1835	0	8
9	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	49	54			961312	94190	3	136:Membrane Protein	15	0	1	1835	0	9
10	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	54	73			961219	94190	5	136:Membrane Protein	15	0	1	1835	0	10
11	DeepTMHMM:TMhelix		TMhelix	55	72			997988	94190	2056	141:DeepTMHMM: helix	15	0	1	1835	5	11
12	DeepTMHMM:outside		outside	73	264			997989	94190	10025	15	0	1	1835	0	12
13	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	73	258			961216	94190	18	136:Membrane Protein	15	0	1	1835	0	13
14	PFAM:PF03772	IPR004477	Competence protein	234	496	211.3	0	961210	94190	3447	15	0	1	1835	0	14
15	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	258	278			961303	94190	5	136:Membrane Protein	15	0	1	1835	0	15
16	DeepTMHMM:TMhelix		TMhelix	265	278			997990	94190	2056	141:DeepTMHMM: helix	15	0	1	1835	5	16
17	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	278	289			961316	94190	3	136:Membrane Protein	15	0	1	1835	0	17
18	DeepTMHMM:inside		inside	279	285			997991	94190	9730	15	0	1	1835	0	18
19	DeepTMHMM:TMhelix		TMhelix	286	301			997992	94190	2056	141:DeepTMHMM: helix	15	0	1	1835	5	19
20	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	289	319			961220	94190	5	136:Membrane Protein	15	0	1	1835	0	20
21	DeepTMHMM:outside		outside	302	308			997993	94190	10025	15	0	1	1835	0	21
22	DeepTMHMM:TMhelix		TMhelix	309	322			997994	94190	2056	141:DeepTMHMM: helix	15	0	1	1835	5	22
23	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	319	330			961213	94190	18	136:Membrane Protein	15	0	1	1835	0	23
24	DeepTMHMM:inside		inside	323	331			997995	94190	9730	15	0	1	1835	0	24
25	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	330	351			961222	94190	5	136:Membrane Protein	15	0	1	1835	0	25
26	DeepTMHMM:TMhelix		TMhelix	332	345			997996	94190	2056	141:DeepTMHMM: helix	15	0	1	1835	5	26
27	DeepTMHMM:outside		outside	346	358			997997	94190	10025	15	0	1	1835	0	27
28	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	351	356			961314	94190	3	136:Membrane Protein	15	0	1	1835	0	28
29	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	356	376			961218	94190	5	136:Membrane Protein	15	0	1	1835	0	29
30	DeepTMHMM:TMhelix		TMhelix	359	368			997998	94190	2056	141:DeepTMHMM: helix	15	0	1	1835	5	30
31	DeepTMHMM:inside		inside	369	388			997999	94190	9730	15	0	1	1835	0	31
32	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	376	387			961217	94190	18	136:Membrane Protein	15	0	1	1835	0	32
33	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	387	407			961224	94190	5	136:Membrane Protein	15	0	1	1835	0	33
34	DeepTMHMM:TMhelix		TMhelix	389	401			998000	94190	2056	141:DeepTMHMM: helix	15	0	1	1835	5	34
35	DeepTMHMM:outside		outside	402	420			998001	94190	10025	15	0	1	1835	0	35
36	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	407	418			961307	94190	3	136:Membrane Protein	15	0	1	1835	0	36
37	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	418	438			961225	94190	5	136:Membrane Protein	15	0	1	1835	0	37
38	DeepTMHMM:TMhelix		TMhelix	421	441			998002	94190	2056	141:DeepTMHMM: helix	15	0	1	1835	5	38
39	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	438	444			961215	94190	18	136:Membrane Protein	15	0	1	1835	0	39
40	DeepTMHMM:inside		inside	442	442			998075	94190	9730	15	0	1	1835	0	40
41	DeepTMHMM:TMhelix		TMhelix	443	452			998077	94190	2056	141:DeepTMHMM: helix	15	0	1	1835	5	41
42	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	444	462			961223	94190	5	136:Membrane Protein	15	0	1	1835	0	42
43	DeepTMHMM:outside		outside	453	481			998079	94190	10025	15	0	1	1835	0	43
44	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	462	481			961320	94190	3	136:Membrane Protein	15	0	1	1835	0	44
45	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	481	498			961226	94190	5	136:Membrane Protein	15	0	1	1835	0	45
46	DeepTMHMM:TMhelix		TMhelix	482	496			998081	94190	2056	141:DeepTMHMM: helix	15	0	1	1835	5	46
47	DeepTMHMM:inside		inside	497	510			998084	94190	9730	15	0	1	1835	0	47
48	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	498	509			961212	94190	18	136:Membrane Protein	15	0	1	1835	0	48
49	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	509	530			961227	94190	5	136:Membrane Protein	15	0	1	1835	0	49
50	DeepTMHMM:TMhelix		TMhelix	511	525			998086	94190	2056	141:DeepTMHMM: helix	15	0	1	1835	5	50
51	DeepTMHMM:outside		outside	526	794			998088	94190	10025	15	0	1	1835	0	51
52	SUPERFAMILY:SSF56281	IPR036866	Ribonuclease Z/Hydroxyacylglutathione hydrolase-like	529	793			961324	94190	830	15	0	1	1835	0	52
53	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	530	794			961318	94190	3	136:Membrane Protein	15	0	1	1835	0	53
54	CDD:cd07731	IPR035681	ComA-like_MBL-fold	533	724			961322	94190	2394	15	0	1	1835	0	54
55	SMART:SM00849	IPR001279		541	749			961208	94190	1	15	0	1	1835	0	55
56	PFAM:PF00753	IPR001279	Metallo-beta-lactamase superfamily	570	736	36	6.6E-9	961211	94190	1136	15	0	1	1835	0	56

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