Cellulosome Database Search

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Genome ifo

Gs0159231: Syntrophomonas erecta sporosyntropha, JCM 13344 [-] (ncbi)

Genbanks info:

Genbank_acc: PROKKA_00963
Genome uid: 222
989278-994797 [+] (1839)

Sequence:

HTVISYQRKFAYIAMLAFMMTIIFFSPHTAYAKSVTIKDIQGHWAEQTIQNMVDNGIVAGNPDGTFKPEGKITRAEFATL
LVKAYKLSGSGKVFADTSSHWAKDYIAIASANSIVNGYNDGEFGPNDLITREQTAVMIVKAAQLEPSNATLSFADSAKIS
TWASNAVAAAYANQIIKGLPDGRFAPQDNATRAQAVVVINAALNARVTPSVAVEPEQDYSLIEKAGSYGPAAGSQTINGN
VTVKAKDVTLENLRIKGDLIIAEEVGDGDVILNKVMVEGKTYIRGGGQDSIYINGGKHSEIIVEKTAGGQVRIVVVDVQG
IKVTIAENAENEKVMLQGQFKSVTIKADDVKITTQEDTGIDEVKVQKGLKGINVELAKGSSVKGMILDSKTTIKGEGTIK
EASGEKVKETTFQKQPDKIVTKSSGGRGGGGPATPSTTAEVSSVDALNKALNDSNIKTINFTNNIKANVEIKRLPNTINF
GSYALDGDLKITTNDKGTMILSGNTSPCIKGNLTVNAPNATIANKIKVGGIINIVAVAPNSWNEEADGNSLNIQAENASI
NITGQVNTLVVNVSVRVNVAGTGNVTEVTFNASAEITGGGSIESAVINVTGVKIDIAPQQTTLGEGTTVEIGGSQRDTAW
IDTQNAINALSKQIQKADDLFASTPEGDQPGQASQTARLDFKTAINAAKAVNSNSNSSAEEIKAATNALTTATAAFEAVL
VKEVPVIGVFIDQTSIGLEVGQSENLIAIVQPENASNKAVAWSSSNPEIATVDNTGKVTGFKAGTTTIAATTADGNKTAD
CLVTVVDISILAITGVAIIPDIINIEKGTSIEALGLPTQIEVMITGGEKRTVDVTWNDGIPQYNPNQVGDYTFYGTLTNL
PTGVTNPSHHKATVKVIVIASLEDNTPPVMTRLGNETVILNVGETYIEPGVTAIDDNDGDITSNIVRTIVIDATGSNRDE
VDTSEGCSYTIHYNIMDFFGNTAEVTRKVIVIEKVREITVSSQDGITTILKSQTLQMQATITRDTATNKEVTWSVEPGTG
TATIDNDGLLTATGAGTVTVKATAKDGSGIVGEIGITIKESSIPVTDVFMGVSSEYIEVGKDVTLLAIVQPENASNKAVT
WSSSNTEIATVDSTGKVTGLKAGIATIMVTTADGNKSATCEVMVEDPTVHDASLASFKVADRNVLDLPNIEVNDPENDAG
ATLENNFANRFGISARADLDGTTVTIIVNNEVVADPANYGVNAGDVIVVTLNVQGIVTKYYKVTVAAVQGPEPPAAPEAS
AVTITQPIENAAIGQTNITIATNLEFRITDAAGIEKQGWTDGTGEALATTANPALAAGDKLEVRVKEALPVLAGDIYTYI
VQTDDIGTGNEKAGAALAAVEAAEQAVAAFTEGVYSETDLENAGDLRYAALGKINLLDDGDLKTALMARHNKVSEILRIY
NELLDEYDGLVAKYTKFQNLTTNEVLIKKYTIGSGGSLRTVFTWESTNSELTEITERGDNEYNLVIYRPDNTAGDAVTAL
DLTITLTSYELQSTYILKKSFPITIAAFTEAEQAVIDAAWKKVNDAIADFNVAFTDDMYDSTAAKNLYATALEPALDAIS
AVFDSNVGWYGNIDLLDEALIPIRSLLDAMESIILDIEGDGTEDEPGISPISDEYIWLTQTGYDTIPSNVITAWTSSHSD
IVSTDGQVTRPVGADVDITLSLTLTADEYILQNEFTVTVLAIDPRDAALEELIIGGVTAEDMAGAENNGKVLVKWTPLTG
AQIEETGALGYTVFYNDGIDSYGSIDVEDPRADKLEVTDLIADREYSFWIISYNETCESAWIEEAQAQATPFDELIEP

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	SUPERFAMILY:SSF75217	IPR029028	Alpha/beta knot methyltransferases	0	225			896240	942179	1921	0	0	1	936	0	1
2	PHOBIUS:SIGNAL_PEPTIDE		Signal peptide region	0	23			1127553	942179	19	135:all secretion /signal peptide, lipo	0	0	1	936	3	2
3	PHOBIUS:SIGNAL_PEPTIDE_N_REGION		N-terminal region of a signal peptide.	0	3			1127557	942179	21	135:all secretion /signal peptide, lipo	0	0	1	936	3	3
4	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	0	20			2382045	942179	18	136:Membrane Protein	0	0	0	936	0	4
5	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	0	11			2737166	942179	18	136:Membrane Protein	0	0	0	936	0	5
6	CDD:cd18080	IPR002649	TrmD-like	1	220			896238	942179	1920	0	0	1	936	0	6
7	DeepTMHMM:inside		inside	1	23			2404829	942179	9730	0	0	0	936	0	7
8	PHOBIUS:SIGNAL_PEPTIDE_H_REGION		Hydrophobic region of a signal peptide.	3	15			1127563	942179	24	135:all secretion /signal peptide, lipo	0	0	1	936	3	8
9	SUPERFAMILY:SSF63418	IPR035911	MurE/MurF, N-terminal	3	97			2693672	942179	63	0	0	0	936	0	9
10	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	11	32			2737167	942179	5	136:Membrane Protein	0	0	0	936	0	10
11	PHOBIUS:SIGNAL_PEPTIDE_C_REGION		C-terminal region of a signal peptide.	15	23			1127560	942179	26	135:all secretion /signal peptide, lipo	0	0	1	936	3	11
12	SUPERFAMILY:SSF90123	IPR036640	ABC transporter type 1, transmembrane domain superfamily	18	319			2382057	942179	442	137:Transmembrane	0	0	0	936	0	12
13	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	20	46			2382049	942179	5	136:Membrane Protein	0	0	0	936	0	13
14	PFAM:PF01225	IPR000713	Mur ligase family, catalytic domain	21	96	36.9	3.4E-9	2693668	942179	60	0	0	0	936	0	14
15	PFAM:PF01746	IPR016009	tRNA (Guanine-1)-methyltransferase	22	220	192.5	0	896236	942179	1919	0	0	1	936	0	15
16	SIGNALP6:SP		SP	22	23	0		1128716	942179	1978	135:all secretion /signal peptide, lipo	0	0	1	936	0	16
17	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	23	76			1127551	942179	3	136:Membrane Protein	0	0	1	936	0	17
18	PFAM:PF00664	IPR011527	ABC transporter transmembrane region	24	291	57.8	1.3E-15	2382039	942179	432	137:Transmembrane	0	0	0	936	0	18
19	DeepTMHMM:TMhelix		TMhelix	24	39			2404830	942179	2056	141:DeepTMHMM: helix	0	0	0	936	6	19
20	PROSITE_PROFILES:PS51272	IPR001119	S-layer homology (SLH) domain profile.	32	96			2737170	942179	317	225:S-layer Homology:PROSITE	0	0	0	936	0	20
21	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	32	1839			2737165	942179	3	136:Membrane Protein	0	0	0	936	0	21
22	SIGNALP6:SP		SP	33	34	0		2741861	942179	1978	135:all secretion /signal peptide, lipo	0	0	0	936	3	22
23	PFAM:PF00395	IPR001119	S-layer homology domain	37	79	50.9	1.2E-13	2737157	942179	315	4:S-layer Homology:PFAM	0	0	0	936	0	23
24	DeepTMHMM:outside		outside	40	62			2404831	942179	10025	0	0	0	936	0	24
25	CDD:cd07346		ABC_6TM_exporters	44	314			2382056	942179	3795	0	0	0	936	0	25
26	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	46	57			2382042	942179	3	136:Membrane Protein	0	0	0	936	0	26
27	PROSITE_PROFILES:PS50929	IPR011527	ABC transporter integral membrane type-1 fused domain profile.	47	306			2382054	942179	436	136:Membrane Protein	0	0	0	936	0	27
28	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	57	79			2382052	942179	5	136:Membrane Protein	0	0	0	936	0	28
29	DeepTMHMM:TMhelix		TMhelix	63	83			2404832	942179	2056	141:DeepTMHMM: helix	0	0	0	936	6	29
30	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	79	140			2382047	942179	18	136:Membrane Protein	0	0	0	936	0	30
31	DeepTMHMM:inside		inside	84	136			2404833	942179	9730	0	0	0	936	0	31
32	PFAM:PF00395	IPR001119	S-layer homology domain	94	136	47.7	1.1E-12	2737158	942179	315	4:S-layer Homology:PFAM	0	0	0	936	0	32
33	PROSITE_PROFILES:PS51272	IPR001119	S-layer homology (SLH) domain profile.	96	150			2737168	942179	317	225:S-layer Homology:PROSITE	0	0	0	936	0	33
34	SUPERFAMILY:SSF53623	IPR036565	Mur-like, catalytic domain superfamily	98	329			2693670	942179	64	0	0	0	936	0	34
35	PFAM:PF08245	IPR013221	Mur ligase middle domain	107	308	196.8	0	2693669	942179	61	0	0	0	936	0	35
36	DeepTMHMM:TMhelix		TMhelix	137	158			2404834	942179	2056	141:DeepTMHMM: helix	0	0	0	936	6	36
37	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	140	159			2382051	942179	5	136:Membrane Protein	0	0	0	936	0	37
38	PROSITE_PROFILES:PS51272	IPR001119	S-layer homology (SLH) domain profile.	150	214			2737169	942179	317	225:S-layer Homology:PROSITE	0	0	0	936	0	38
39	PFAM:PF00395	IPR001119	S-layer homology domain	152	196	46.7	2.3E-12	2737159	942179	315	4:S-layer Homology:PFAM	0	0	0	936	0	39
40	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	159	164			2382043	942179	3	136:Membrane Protein	0	0	0	936	0	40
41	DeepTMHMM:outside		outside	159	162			2404835	942179	10025	0	0	0	936	0	41
42	DeepTMHMM:TMhelix		TMhelix	163	183			2404836	942179	2056	141:DeepTMHMM: helix	0	0	0	936	6	42
43	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	164	184			2382048	942179	5	136:Membrane Protein	0	0	0	936	0	43
44	SUPERFAMILY:SSF52540	IPR027417	P-loop containing nucleoside triphosphate hydrolase	179	405			2660880	942179	78	0	0	0	936	0	44
45	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	184	243			2382044	942179	18	136:Membrane Protein	0	0	0	936	0	45
46	DeepTMHMM:inside		inside	184	244			2404837	942179	9730	0	0	0	936	0	46
47	SMART:SM00382	IPR003593		218	351			2660877	942179	1	0	0	0	936	0	47
48	PFAM:PF00004	IPR003959	ATPase family associated with various cellular activities (AAA)	223	349	88.8	3.8E-25	2660878	942179	271	0	0	0	936	0	48
49	CDD:cd00009		AAA	223	348			2660879	942179	93	0	0	0	936	0	49
50	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	243	269			2382050	942179	5	136:Membrane Protein	0	0	0	936	0	50
51	DeepTMHMM:TMhelix		TMhelix	245	267			2404838	942179	2056	141:DeepTMHMM: helix	0	0	0	936	6	51
52	DeepTMHMM:outside		outside	268	279			2404839	942179	10025	0	0	0	936	0	52
53	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	269	274			2382041	942179	3	136:Membrane Protein	0	0	0	936	0	53
54	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	274	291			2382053	942179	5	136:Membrane Protein	0	0	0	936	0	54
55	DeepTMHMM:TMhelix		TMhelix	280	305			2404840	942179	2056	141:DeepTMHMM: helix	0	0	0	936	6	55
56	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	291	580			2382046	942179	18	136:Membrane Protein	0	0	0	936	0	56
57	DeepTMHMM:inside		inside	306	580			2404841	942179	9730	0	0	0	936	0	57
58	SUPERFAMILY:SSF52540	IPR027417	P-loop containing nucleoside triphosphate hydrolase	328	571			2382058	942179	78	0	0	0	936	0	58
59	SUPERFAMILY:SSF53244	IPR036615	Mur ligase, C-terminal domain superfamily	329	486			2693671	942179	65	0	0	0	936	0	59
60	PFAM:PF02875	IPR004101	Mur ligase family, glutamate ligase domain	329	415	82.2	2.3E-23	2693667	942179	62	0	0	0	936	0	60
61	PROSITE_PROFILES:PS50893	IPR003439	ATP-binding cassette, ABC transporter-type domain profile.	335	570			2382055	942179	76	0	0	0	936	0	61
62	PFAM:PF00005	IPR003439	ABC transporter	351	500	97.3	1.0E-27	2382040	942179	75	0	0	0	936	0	62
63	SMART:SM00382	IPR003593		360	547			2382038	942179	1	0	0	0	936	0	63
64	SUPERFAMILY:SSF49373	IPR008964	Invasin/intimin cell-adhesion fragments	724	806			2737175	942179	987	19:CBM6	0	0	0	936	5	64
65	SMART:SM00635	IPR003343		725	803			2737155	942179	1	0	0	0	936	0	65
66	PFAM:PF02368	IPR003343	Bacterial Ig-like domain (group 2)	728	802	68.4	3.7E-19	2737161	942179	3251	0	0	0	936	0	66
67	PFAM:PF07532	IPR011081	Bacterial Ig-like domain (group 4)	823	878	37.3	1.6E-9	2737164	942179	911	0	0	0	936	0	67
68	PFAM:PF16403	IPR032179	Domain of unknown function (DUF5011)	912	992	48.3	7.6E-13	2737163	942179	4981	0	0	0	936	0	68
69	SMART:SM00635	IPR003343		994	1075			2737153	942179	1	0	0	0	936	0	69
70	PFAM:PF02368	IPR003343	Bacterial Ig-like domain (group 2)	995	1070	46.8	2.1E-12	2737162	942179	3251	0	0	0	936	0	70
71	SUPERFAMILY:SSF49373	IPR008964	Invasin/intimin cell-adhesion fragments	1004	1078			2737173	942179	987	19:CBM6	0	0	0	936	5	71
72	SUPERFAMILY:SSF49373	IPR008964	Invasin/intimin cell-adhesion fragments	1083	1165			2737174	942179	987	19:CBM6	0	0	0	936	5	72
73	SMART:SM00635	IPR003343		1088	1162			2737154	942179	1	0	0	0	936	0	73
74	PFAM:PF02368	IPR003343	Bacterial Ig-like domain (group 2)	1097	1163	63.4	1.4E-17	2737160	942179	3251	0	0	0	936	0	74
75	PFAM:PF20578	IPR046780	Atrophied bacterial Ig domain	1672	1722	31.1	1.5E-7	2737156	942179	3698	0	0	0	936	0	75
76	PROSITE_PROFILES:PS50853	IPR003961	Fibronectin type-III domain profile.	1733	1834			2737171	942179	808	0	0	0	936	0	76
77	SUPERFAMILY:SSF49265	IPR036116	Fibronectin type III superfamily	1747	1832			2737176	942179	318	4:S-layer Homology:PFAM	0	0	0	936	0	77
78	CDD:cd00063	IPR003961	FN3	1751	1829			2737172	942179	508	35:FN3	0	0	0	936	0	78

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