Cellulosome Database Search

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Genome ifo

Gs0159231: Syntrophomonas erecta sporosyntropha, JCM 13344 [-] (ncbi)

Genbanks info:

Genbank_acc: PROKKA_01574
Genome uid: 222
1602003-1604495 [+] (830)

Sequence:

LRNFVKNLLDDNEKDIRRLRKIVDQVNSLEAQFTDLPAEAFPSKTEELRERLKNGQDLSDILPEAFALVREASRRTMGMR
HFDVQLIGGMVLHEGRIAEMKTGEGKTLVATLPAYLNALEGKGVHIVTVNDYLVTRDANWMRPVYEYCGLSVGLIIHGLN
YQERKDAYACDVVYGTNNEFGFDYLRDNMVVSPENMVQRELNYAIVDEVDSILIDEARTPLIISGEGDKPTNLYYQIARF
VPRLENETDYKVDEKAHLVTLTEEGVKKVESFFAIENLSENMEIAHHVNQGLRAHCLMKRDRDYVVKDDQVIIVDEFTGR
LMFGRRYSDGLHQAIEAKEGVKIEKESQTLATITFQNYFRMYNKLSGMTGTAQTEEEEFRKIYGMDVVVIPTHKPMVRED
APDVIYRTEIGKFNAVVEDIGERYRKGQPVLVGTISIEKSEILSDLLKKKGIPHQVLNAKFHEKEAQIIAQAGQRGTVTI
ATNMAGRGTDIVLGEGVQELGGLYVLGTERHEARRIDNQLRGRSGRQGDPGESRFYVSLEDDLLRLFGSANIEGLMDRLG
MDDSIPIEHKMVSRAIENAQRKVEGRNFSIRKNVLEYDDVINQQREVMYGERRKVLYGENLKDTIAAMIDDVVEQVVASF
AGEEKYSDEWDLPRLISYVGQHILPVIDFTEEGLKGMTREDMSELLTERTHAYYEKREAELGSETMRELERAVMLHIIDE
KWMDHIDAMDQLRNGISLRAYGQKDPLVEYKFEAYDAFQSMVYSIKEDVVRYILRVKVVEKPEERKIIVNQGEETEKKPV
RVGKKIGRNDPCPCGSGKKYKKCCGRGVS

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:SIGNAL_PEPTIDE_N_REGION		N-terminal region of a signal peptide.	0	3			567243	942770	21	135:all secretion /signal peptide, lipo	15	0	1	1527	3	1
2	PHOBIUS:SIGNAL_PEPTIDE		Signal peptide region	0	20			567186	942770	19	135:all secretion /signal peptide, lipo	15	0	1	1527	3	2
3	SUPERFAMILY:SSF52507	IPR036551	Flavin prenyltransferase-like	0	178			2674070	942770	1125	0	0	0	1527	0	3
4	PROSITE_PROFILES:PS51196	IPR014018	SecA family profile.	1	569			2734020	942770	486	0	0	0	1527	0	4
5	PHOBIUS:SIGNAL_PEPTIDE_H_REGION		Hydrophobic region of a signal peptide.	3	15			567244	942770	24	135:all secretion /signal peptide, lipo	15	0	1	1527	3	5
6	PFAM:PF02441	IPR003382	Flavoprotein	5	177	155.1	1.4013E-45	2674068	942770	1124	0	0	0	1527	0	6
7	PROSITE_PROFILES:PS50977	IPR001647	TetR-type HTH domain profile.	5	66			2697811	942770	704	0	0	0	1527	0	7
8	SMART:SM00957	IPR011115		5	381			2734014	942770	1	0	0	0	1527	0	8
9	SUPERFAMILY:SSF46689	IPR009057	Homeobox-like domain superfamily	7	64			2697813	942770	657	0	0	0	1527	0	9
10	PFAM:PF07517	IPR011115	SecA DEAD-like domain	8	381	449.2	0	2734016	942770	482	0	0	0	1527	0	10
11	SUPERFAMILY:SSF52540	IPR027417	P-loop containing nucleoside triphosphate hydrolase	10	394			2734026	942770	78	0	0	0	1527	0	11
12	PFAM:PF00440	IPR001647	Bacterial regulatory proteins, tetR family	11	56	39.9	2.7E-10	2697809	942770	702	0	0	0	1527	0	12
13	PRINTS:PR00455	IPR001647	TetR bacterial regulatory protein HTH signature	11	25			2697808	942770	1226	0	0	0	1527	0	13
14	PHOBIUS:SIGNAL_PEPTIDE_C_REGION		C-terminal region of a signal peptide.	15	20			567187	942770	26	135:all secretion /signal peptide, lipo	15	0	1	1527	3	14
15	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	20	167			567242	942770	3	136:Membrane Protein	15	0	1	1527	0	15
16	SIGNALP6:SP		SP	20	21	0		600731	942770	1978	135:all secretion /signal peptide, lipo	15	0	1	1527	0	16
17	SUPERFAMILY:SSF142019	IPR037225	NADH-ubiquinone oxidoreductase 51kDa subunit, FMN-binding domain superfamily	25	266			343976	942770	1059	15	0	1	1527	0	17
18	PRINTS:PR00455	IPR001647	TetR bacterial regulatory protein HTH signature	32	56			2697807	942770	1226	0	0	0	1527	0	18
19	PFAM:PF14730	IPR027823	Domain of unknown function (DUF4468) with TBP-like fold	36	106	23	8.0E-5	567185	942770	9251	15	0	1	1527	0	19
20	CDD:cd17928		DEXDc_SecA	44	393			2734022	942770	488	0	0	0	1527	0	20
21	PROSITE_PROFILES:PS50977	IPR001647	TetR-type HTH domain profile.	46	107			1346999	942770	704	15	0	1	1527	0	21
22	SUPERFAMILY:SSF46689	IPR009057	Homeobox-like domain superfamily	46	118			1347001	942770	657	15	0	1	1527	0	22
23	PRINTS:PR00455	IPR001647	TetR bacterial regulatory protein HTH signature	52	66			1346996	942770	1226	15	0	1	1527	0	23
24	PFAM:PF00440	IPR001647	Bacterial regulatory proteins, tetR family	52	99	53.4	1.6E-14	1346998	942770	702	15	0	1	1527	0	24
25	PRINTS:PR00906	IPR000185	SecA protein signature	61	86			2734009	942770	470	0	0	0	1527	0	25
26	PRINTS:PR00455	IPR001647	TetR bacterial regulatory protein HTH signature	73	97			1346997	942770	1226	15	0	1	1527	0	26
27	PFAM:PF01512	IPR011538	Respiratory-chain NADH dehydrogenase 51 Kd subunit	73	245	165.3	0	343939	942770	1045	15	0	1	1527	0	27
28	SUPERFAMILY:SSF48498	IPR036271	Tetracyclin repressor-like, C-terminal domain superfamily	79	193			2697812	942770	1227	0	0	0	1527	0	28
29	PFAM:PF08359	IPR013570	YsiA-like protein, C-terminal region	83	191	41.4	1.5E-10	2697810	942770	5589	0	0	0	1527	0	29
30	PROSITE_PROFILES:PS51192	IPR014001	Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile.	87	246			2734019	942770	487	0	0	0	1527	0	30
31	PRINTS:PR00906	IPR000185	SecA protein signature	99	114			2734012	942770	470	0	0	0	1527	0	31
32	PRINTS:PR00906	IPR000185	SecA protein signature	115	126			2734006	942770	470	0	0	0	1527	0	32
33	SUPERFAMILY:SSF48498	IPR036271	Tetracyclin repressor-like, C-terminal domain superfamily	154	235			1347003	942770	1227	15	0	1	1527	0	33
34	PRINTS:PR00906	IPR000185	SecA protein signature	168	189			2734007	942770	470	0	0	0	1527	0	34
35	SUPERFAMILY:SSF102645	IPR035929	CoaB-like superfamily	182	395			2674071	942770	3346	0	0	0	1527	0	35
36	PFAM:PF04127	IPR007085	DNA / pantothenate metabolism flavoprotein	185	366	237	0	2674069	942770	3345	0	0	0	1527	0	36
37	SUPERFAMILY:SSF81767	IPR036670	SecA, preprotein cross-linking domain superfamily	225	347			2734027	942770	491	0	0	0	1527	0	37
38	SMART:SM00958	IPR011130		226	337			2734013	942770	1	0	0	0	1527	0	38
39	PFAM:PF01043	IPR011130	SecA preprotein cross-linking domain	231	337	143.3	3.89981E-42	2734015	942770	484	0	0	0	1527	0	39
40	SUPERFAMILY:SSF142984		-	266	350			343979	942770	12	15	0	1	1527	0	40
41	PFAM:PF10531	IPR019554	SLBB domain	268	317	32.4	6.2E-8	343942	942770	1048	15	0	1	1527	0	41
42	PRINTS:PR00906	IPR000185	SecA protein signature	317	340			2734010	942770	470	0	0	0	1527	0	42
43	SUPERFAMILY:SSF140490	IPR037207	NADH-ubiquinone oxidoreductase 51kDa subunit, iron-sulphur binding domain superfamily	350	453			343981	942770	1058	15	0	1	1527	0	43
44	SMART:SM00928	IPR019575		354	400			343933	942770	1	15	0	1	1527	0	44
45	PRINTS:PR00906	IPR000185	SecA protein signature	354	372			2734011	942770	470	0	0	0	1527	0	45
46	PFAM:PF10589	IPR019575	NADH-ubiquinone oxidoreductase-F iron-sulfur binding region	356	440	121.2	1.2E-35	343936	942770	1046	15	0	1	1527	0	46
47	PRINTS:PR00906	IPR000185	SecA protein signature	391	405			2734008	942770	470	0	0	0	1527	0	47
48	SUPERFAMILY:SSF52540	IPR027417	P-loop containing nucleoside triphosphate hydrolase	395	568			2734025	942770	78	0	0	0	1527	0	48
49	CDD:cd18803	IPR044722	SF2_C_secA	398	539			2734023	942770	489	0	0	0	1527	0	49
50	PROSITE_PROFILES:PS51194	IPR001650	Superfamilies 1 and 2 helicase C-terminal domain profile.	416	574			2734021	942770	1121	0	0	0	1527	0	50
51	PROSITE_PROFILES:PS51379	IPR017896	4Fe-4S ferredoxin-type iron-sulfur binding domain profile.	453	483			343948	942770	180	15	0	1	1527	0	51
52	SUPERFAMILY:SSF54862		-	456	509			343954	942770	12	15	0	1	1527	0	52
53	PFAM:PF12838	IPR017896	4Fe-4S dicluster domain	461	507	37.6	2.4E-9	343945	942770	175	15	0	1	1527	0	53
54	PROSITE_PROFILES:PS51379	IPR017896	4Fe-4S ferredoxin-type iron-sulfur binding domain profile.	483	511			343951	942770	180	15	0	1	1527	0	54
55	PFAM:PF07516	IPR011116	SecA Wing and Scaffold domain	566	777	235	0	2734017	942770	483	0	0	0	1527	0	55
56	SUPERFAMILY:SSF81886	IPR036266	SecA, Wing/Scaffold superfamily	569	817			2734024	942770	490	0	0	0	1527	0	56
57	PFAM:PF02810	IPR004027	SEC-C motif	808	827	39.3	4.4E-10	2734018	942770	485	0	0	0	1527	0	57

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