Cellulosome Database Search

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Genome ifo

Gs0159231: Syntrophomonas erecta sporosyntropha, JCM 13344 [-] (ncbi)

Genbanks info:

Genbank_acc: PROKKA_02343
Genome uid: 222
2400211-2401179 [+] (322)

Sequence:

KLSKEKLLELYKTMVTIRTFELKAIELFAAGKFPGFVHSYLGEEAVATGVCATLETKDYITSTHRGHGHLIAKGGNIDLM
MAELYGKKTGYCKGKGGSMHIADVELGILGANGIVGAGMPIATGAAFACKYNETDAVAVSFFGDGASDRATFHESLNLGS
IWKLPVVYVCENNGWAISNAQETHQNITDISDRATAYGIPGVSVDGNDVIAVYEAAAEAVERARRGDGPSLIECKTWRHR
GHFEGDPATYKDPKDQEEWLSDKKDPIPRMEKKLLDLKFATAEDFAQIKAEVAAKIHAAVKFAESSLDPDPAEVLTDVYA
D

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:SIGNAL_PEPTIDE_N_REGION		N-terminal region of a signal peptide.	0	11			723145	943528	21	135:all secretion /signal peptide, lipo	13	0	1	2285	3	1
2	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	0	53			1533162	943528	18	136:Membrane Protein	13	0	1	2285	0	2
3	PHOBIUS:SIGNAL_PEPTIDE		Signal peptide region	0	32			723147	943528	19	135:all secretion /signal peptide, lipo	13	0	1	2285	3	3
4	PFAM:PF07963	IPR012902	Prokaryotic N-terminal methylation motif	0	27	34.3	1.0E-8	723141	943528	2950	13	0	1	2285	0	4
5	SUPERFAMILY:SSF53335	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	1	245			456977	943528	167	13	0	1	2285	0	5
6	SUPERFAMILY:SSF52518	IPR029061	Thiamin diphosphate-binding fold	1	322			2728259	943528	9	0	0	0	2285	0	6
7	DeepTMHMM:inside		inside	1	54			1596937	943528	9730	13	0	1	2285	0	7
8	DeepTMHMM:inside		inside	1	13			712493	943528	9730	13	0	1	2285	0	8
9	CDD:cd10453		GIY-YIG_RE_Cfr42I	5	158			2675844	943528	9550	0	0	0	2285	0	9
10	SIGNALP6:PILIN		PILIN	6	7	0		692016	943528	2004	135:all secretion /signal peptide, lipo	13	0	1	2285	0	10
11	SUPERFAMILY:SSF54523	IPR045584	Pilin-like	6	109			723148	943528	2951	13	0	1	2285	0	11
12	CDD:cd02000		TPP_E1_PDC_ADC_BCADC	10	304			2728258	943528	6325	0	0	0	2285	0	12
13	PHOBIUS:SIGNAL_PEPTIDE_H_REGION		Hydrophobic region of a signal peptide.	11	27			723146	943528	24	135:all secretion /signal peptide, lipo	13	0	1	2285	3	13
14	PFAM:PF00676	IPR001017	Dehydrogenase E1 component	13	312	297.6	0	2728257	943528	6324	0	0	0	2285	0	14
15	DeepTMHMM:TMhelix		TMhelix	14	27			712494	943528	2056	141:DeepTMHMM: helix	13	0	1	2285	6	15
16	PHOBIUS:SIGNAL_PEPTIDE_C_REGION		C-terminal region of a signal peptide.	27	32			723144	943528	26	135:all secretion /signal peptide, lipo	13	0	1	2285	3	16
17	DeepTMHMM:outside		outside	28	314			712496	943528	10025	13	0	1	2285	0	17
18	PFAM:PF07596	IPR011453	Protein of unknown function (DUF1559)	30	296	201.4	0	723142	943528	11535	13	0	1	2285	0	18
19	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	32	314			723143	943528	3	136:Membrane Protein	13	0	1	2285	0	19
20	SMART:SM00091	IPR000014		35	97			2704639	943528	1	0	0	0	2285	0	20
21	PFAM:PF09517	IPR018575	Eco29kI restriction endonuclease	35	195	232.2	0	2675843	943528	9340	0	0	0	2285	0	21
22	CDD:cd02440		AdoMet_MTases	40	141			456976	943528	632	13	0	1	2285	0	22
23	PFAM:PF13649	IPR041698	Methyltransferase domain	40	135	58.5	7.8E-16	456975	943528	813	13	0	1	2285	0	23
24	SUPERFAMILY:SSF55785	IPR035965	PAS domain superfamily	48	152			2704669	943528	289	0	0	0	2285	0	24
25	PFAM:PF13426	IPR000014	PAS domain	51	142	10.3	0.67	2704645	943528	275	0	0	0	2285	0	25
26	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	53	77			1533159	943528	5	136:Membrane Protein	13	0	1	2285	0	26
27	DeepTMHMM:TMhelix		TMhelix	55	76			1596938	943528	2056	141:DeepTMHMM: helix	13	0	1	2285	6	27
28	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	77	88			1533163	943528	3	136:Membrane Protein	13	0	1	2285	0	28
29	DeepTMHMM:outside		outside	77	84			1596939	943528	10025	13	0	1	2285	0	29
30	DeepTMHMM:TMhelix		TMhelix	85	102			1596940	943528	2056	141:DeepTMHMM: helix	13	0	1	2285	6	30
31	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	88	111			1533160	943528	5	136:Membrane Protein	13	0	1	2285	0	31
32	DeepTMHMM:inside		inside	103	377			1596941	943528	9730	13	0	1	2285	0	32
33	PFAM:PF00672	IPR003660	HAMP domain	105	157	33.2	4.9E-8	1533158	943528	454	13	0	1	2285	0	33
34	PROSITE_PROFILES:PS50885	IPR003660	HAMP domain profile.	107	161			1533165	943528	455	13	0	1	2285	0	34
35	SMART:SM00304	IPR003660		107	161			1533155	943528	1	13	0	1	2285	0	35
36	CDD:cd06225		HAMP	110	156			1533166	943528	457	13	0	1	2285	0	36
37	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	111	377			1533161	943528	18	136:Membrane Protein	13	0	1	2285	0	37
38	SUPERFAMILY:SSF55785	IPR035965	PAS domain superfamily	139	266			2704670	943528	289	0	0	0	2285	0	38
39	PROSITE_PROFILES:PS50112	IPR000014	PAS repeat profile.	152	224			2704654	943528	281	0	0	0	2285	0	39
40	SMART:SM00091	IPR000014		154	222			2704642	943528	1	0	0	0	2285	0	40
41	CDD:cd00130	IPR000014	PAS	165	265			2704660	943528	285	0	0	0	2285	0	41
42	PFAM:PF07730	IPR011712	Histidine kinase	173	237	64	1.4E-17	1533157	943528	1640	13	0	1	2285	0	42
43	PROSITE_PROFILES:PS50109	IPR005467	Histidine kinase domain profile.	176	366			1533164	943528	103	13	0	1	2285	0	43
44	PFAM:PF08447	IPR013655	PAS fold	179	258	65.6	3.8E-18	2704646	943528	453	0	0	0	2285	0	44
45	PROSITE_PROFILES:PS50113	IPR000700	PAC domain profile.	225	277			2704658	943528	280	0	0	0	2285	0	45
46	SMART:SM00086	IPR001610		226	268			2704637	943528	1	0	0	0	2285	0	46
47	SUPERFAMILY:SSF55874	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	238	363			1533168	943528	122	13	0	1	2285	0	47
48	SUPERFAMILY:SSF55785	IPR035965	PAS domain superfamily	264	390			2704667	943528	289	0	0	0	2285	0	48
49	SMART:SM00387	IPR003594		275	366			1533156	943528	1	13	0	1	2285	0	49
50	PROSITE_PROFILES:PS50112	IPR000014	PAS repeat profile.	277	349			2704653	943528	281	0	0	0	2285	0	50
51	SMART:SM00091	IPR000014		279	347			2704641	943528	1	0	0	0	2285	0	51
52	CDD:cd16917		HATPase_UhpB-NarQ-NarX-like	280	363			1533167	943528	3645	13	0	1	2285	0	52
53	CDD:cd00130	IPR000014	PAS	288	389			2704662	943528	285	0	0	0	2285	0	53
54	PFAM:PF08447	IPR013655	PAS fold	304	380	53	3.1E-14	2704649	943528	453	0	0	0	2285	0	54
55	PROSITE_PROFILES:PS50113	IPR000700	PAC domain profile.	350	401			2704656	943528	280	0	0	0	2285	0	55
56	SMART:SM00086	IPR001610		351	392			2704635	943528	1	0	0	0	2285	0	56
57	SUPERFAMILY:SSF55785	IPR035965	PAS domain superfamily	388	515			2704668	943528	289	0	0	0	2285	0	57
58	PROSITE_PROFILES:PS50112	IPR000014	PAS repeat profile.	401	473			2704651	943528	281	0	0	0	2285	0	58
59	SMART:SM00091	IPR000014		402	471			2704638	943528	1	0	0	0	2285	0	59
60	CDD:cd00130	IPR000014	PAS	427	514			2704661	943528	285	0	0	0	2285	0	60
61	PFAM:PF08447	IPR013655	PAS fold	427	505	60.4	1.6E-16	2704648	943528	453	0	0	0	2285	0	61
62	PROSITE_PROFILES:PS50113	IPR000700	PAC domain profile.	474	526			2704657	943528	280	0	0	0	2285	0	62
63	SMART:SM00086	IPR001610		475	517			2704634	943528	1	0	0	0	2285	0	63
64	PROSITE_PROFILES:PS50112	IPR000014	PAS repeat profile.	526	597			2704652	943528	281	0	0	0	2285	0	64
65	SMART:SM00091	IPR000014		528	595			2704640	943528	1	0	0	0	2285	0	65
66	SUPERFAMILY:SSF55785	IPR035965	PAS domain superfamily	533	645			2704671	943528	289	0	0	0	2285	0	66
67	CDD:cd00130	IPR000014	PAS	537	639			2704663	943528	285	0	0	0	2285	0	67
68	PFAM:PF08447	IPR013655	PAS fold	552	628	38.1	1.4E-9	2704647	943528	453	0	0	0	2285	0	68
69	PROSITE_PROFILES:PS50113	IPR000700	PAC domain profile.	599	651			2704655	943528	280	0	0	0	2285	0	69
70	SMART:SM00086	IPR001610		600	642			2704636	943528	1	0	0	0	2285	0	70
71	SUPERFAMILY:SSF47384	IPR036097	Signal transduction histidine kinase, dimerisation/phosphoacceptor domain superfamily	652	718			2704672	943528	108	0	0	0	2285	0	71
72	CDD:cd00082	IPR003661	HisKA	654	718			2704665	943528	356	0	0	0	2285	0	72
73	SMART:SM00388	IPR003661		656	722			2704633	943528	1	0	0	0	2285	0	73
74	PFAM:PF00512	IPR003661	His Kinase A (phospho-acceptor) domain	658	718	44.6	1.1E-11	2704644	943528	355	0	0	0	2285	0	74
75	PROSITE_PROFILES:PS50109	IPR005467	Histidine kinase domain profile.	663	868			2704659	943528	103	0	0	0	2285	0	75
76	SUPERFAMILY:SSF55874	IPR036890	Histidine kinase/HSP90-like ATPase superfamily	715	866			2704666	943528	122	0	0	0	2285	0	76
77	SMART:SM00387	IPR003594		762	868			2704643	943528	1	0	0	0	2285	0	77
78	PFAM:PF02518	IPR003594	Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase	763	867	68.6	5.8E-19	2704650	943528	99	0	0	0	2285	0	78
79	CDD:cd00075		HATPase	767	864			2704664	943528	456	0	0	0	2285	0	79
80	PRINTS:PR00344	IPR004358	Bacterial sensor protein C-terminal signature	799	814			2704632	943528	95	0	0	0	2285	0	80
81	PRINTS:PR00344	IPR004358	Bacterial sensor protein C-terminal signature	817	828			2704630	943528	95	0	0	0	2285	0	81
82	PRINTS:PR00344	IPR004358	Bacterial sensor protein C-terminal signature	828	847			2704631	943528	95	0	0	0	2285	0	82
83	PRINTS:PR00344	IPR004358	Bacterial sensor protein C-terminal signature	851	865			2704629	943528	95	0	0	0	2285	0	83

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