Cellulosome Database Search

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Genome ifo

Gs0159231: Syntrophomonas erecta sporosyntropha, JCM 13344 [-] (ncbi)

Genbanks info:

Genbank_acc: PROKKA_02644
Genome uid: 222
2711630-2713081 [+] (483)

Sequence:

NKIYKEGLTFDDVLLIPGRSEILPSQVDVSTRLTRNLRLEVPIISAGMDTVTETRMAIALAREGGLGIIHKNMSIEEQAK
MVDRVKRSEHGVITDPFYLSPDDMIQDALDIMEHYRISGVPITEGRKLVGIITNRDIRFETDFNQPIRNVMTSEGLVTAP
VDTTLDQAMDILRQYKIEKLPLVDDYFNLMGLITIKDIEKNIKYPHAAKDHRGRLLVGAAVGVTKDTFERVEALKKAGVD
VVVVDTAHGHSVGVINMVKDIKRKFPELDLIAGNVATGEATEELIQAGVDAVKVGIGPGSICTTRVVAGIGVPQITAVMD
CAGVAAKYNIPIIADGGIKHSGDIAKAIAAGADVVMLGNLLAGTEESPGEVVILQGRSYKVYRGMGSLGAMVEGSSDRYF
QEDAKKLVPEGIEGRVPYKGYVSETIFQLIGGLRAGMGYCGVANIEGMKTKSKFIRITNAGLTESHPHDVFITKEAPNYR
VV

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:SIGNAL_PEPTIDE		Signal peptide region	0	23			820987	943829	19	135:all secretion /signal peptide, lipo	15	0	1	2586	3	1
2	SUPERFAMILY:SSF51412		-	0	473			2729776	943829	12	0	0	0	2586	0	2
3	PHOBIUS:SIGNAL_PEPTIDE_N_REGION		N-terminal region of a signal peptide.	0	6			820985	943829	21	135:all secretion /signal peptide, lipo	15	0	1	2586	3	3
4	PHOBIUS:SIGNAL_PEPTIDE		Signal peptide region	0	31			2696328	943829	19	135:all secretion /signal peptide, lipo	0	0	0	2586	3	4
5	PHOBIUS:SIGNAL_PEPTIDE_N_REGION		N-terminal region of a signal peptide.	0	15			2696331	943829	21	135:all secretion /signal peptide, lipo	0	0	0	2586	3	5
6	DeepTMHMM:inside		inside	1	11			2714332	943829	9730	0	0	0	2586	0	6
7	SMART:SM01240			6	469			2729768	943829	1	0	0	0	2586	0	7
8	PHOBIUS:SIGNAL_PEPTIDE_H_REGION		Hydrophobic region of a signal peptide.	6	18			820988	943829	24	135:all secretion /signal peptide, lipo	15	0	1	2586	3	8
9	PFAM:PF00478	IPR001093	IMP dehydrogenase / GMP reductase domain	7	469	563.6	0	2729769	943829	3417	0	0	0	2586	0	9
10	CDD:cd00381	IPR001093	IMPDH	7	458			2729775	943829	3419	0	0	0	2586	0	10
11	SUPERFAMILY:SSF53383	IPR015424	Pyridoxal phosphate-dependent transferase	8	389			2554884	943829	245	15	0	0	2586	0	11
12	PFAM:PF00905	IPR001460	Penicillin binding protein transpeptidase domain	9	81	35.3	6.8E-9	2639035	943829	918	15	0	0	2586	0	12
13	SUPERFAMILY:SSF56601	IPR012338	Beta-lactamase/transpeptidase-like	10	86			2639036	943829	558	15	0	0	2586	0	13
14	DeepTMHMM:TMhelix		TMhelix	12	29			2714333	943829	2056	141:DeepTMHMM: helix	0	0	0	2586	6	14
15	PHOBIUS:SIGNAL_PEPTIDE_H_REGION		Hydrophobic region of a signal peptide.	15	27			2696329	943829	24	135:all secretion /signal peptide, lipo	0	0	0	2586	3	15
16	PHOBIUS:SIGNAL_PEPTIDE_C_REGION		C-terminal region of a signal peptide.	18	23			820989	943829	26	135:all secretion /signal peptide, lipo	15	0	1	2586	3	16
17	SIGNALP6:SP		SP	23	24	0		759993	943829	1978	135:all secretion /signal peptide, lipo	15	0	1	2586	0	17
18	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	23	721			820986	943829	3	136:Membrane Protein	15	0	1	2586	0	18
19	PROSITE_PROFILES:PS51782	IPR018392	LysM domain profile.	26	72			820994	943829	707	15	0	1	2586	0	19
20	CDD:cd00118	IPR018392	LysM	26	72			820995	943829	708	15	0	1	2586	0	20
21	SUPERFAMILY:SSF54106	IPR036779	LysM domain superfamily	26	73			821003	943829	711	15	0	1	2586	0	21
22	SMART:SM00257	IPR018392		27	73			820961	943829	1	15	0	1	2586	0	22
23	PHOBIUS:SIGNAL_PEPTIDE_C_REGION		C-terminal region of a signal peptide.	27	31			2696327	943829	26	135:all secretion /signal peptide, lipo	0	0	0	2586	3	23
24	PFAM:PF01476	IPR018392	LysM domain	28	73	34.5	1.6E-8	820965	943829	705	15	0	1	2586	0	24
25	DeepTMHMM:outside		outside	30	312			2714334	943829	10025	0	0	0	2586	0	25
26	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	31	312			2696330	943829	3	136:Membrane Protein	0	0	0	2586	0	26
27	PFAM:PF00155	IPR004839	Aminotransferase class I and II	33	383	239	0	2554882	943829	679	15	0	0	2586	0	27
28	CDD:cd00609		AAT_like	35	385			2554883	943829	680	15	0	0	2586	0	28
29	CDD:cd06113		citrate_synt_like_1_2	35	442			1955149	943829	3225	15	0	1	2586	0	29
30	SUPERFAMILY:SSF53335	IPR029063	S-adenosyl-L-methionine-dependent methyltransferase superfamily	36	242			2666344	943829	167	0	0	0	2586	0	30
31	SUPERFAMILY:SSF48256	IPR036969	Citrate synthase superfamily	38	442			1955150	943829	3226	15	0	1	2586	0	31
32	PFAM:PF00285	IPR002020	Citrate synthase, C-terminal domain	43	438	390	0	1955148	943829	3224	15	0	1	2586	0	32
33	SUPERFAMILY:SSF54631	IPR046342	CBS domain superfamily	65	203			2729777	943829	1442	0	0	0	2586	0	33
34	CDD:cd02440		AdoMet_MTases	79	151			2666343	943829	632	0	0	0	2586	0	34
35	PFAM:PF13649	IPR041698	Methyltransferase domain	80	136	35.2	1.5E-8	2666342	943829	813	0	0	0	2586	0	35
36	PROSITE_PROFILES:PS51371	IPR000644	CBS domain profile.	92	148			2729772	943829	1439	0	0	0	2586	0	36
37	CDD:cd04601		CBS_pair_IMPDH	93	201			2729774	943829	3418	0	0	0	2586	0	37
38	PFAM:PF00571	IPR000644	CBS domain	94	139	38.2	1.5E-9	2729770	943829	1430	0	0	0	2586	0	38
39	SMART:SM00116	IPR000644		95	143			2729766	943829	1	0	0	0	2586	0	39
40	PROSITE_PROFILES:PS51782	IPR018392	LysM domain profile.	110	155			820992	943829	707	15	0	1	2586	0	40
41	SUPERFAMILY:SSF54106	IPR036779	LysM domain superfamily	110	156			821001	943829	711	15	0	1	2586	0	41
42	CDD:cd00118	IPR018392	LysM	110	155			820998	943829	708	15	0	1	2586	0	42
43	SMART:SM00257	IPR018392		111	156			820952	943829	1	15	0	1	2586	0	43
44	PFAM:PF01476	IPR018392	LysM domain	113	156	29.7	4.8E-7	820984	943829	705	15	0	1	2586	0	44
45	PFAM:PF00571	IPR000644	CBS domain	149	199	31.9	1.4E-7	2729771	943829	1430	0	0	0	2586	0	45
46	PROSITE_PROFILES:PS51371	IPR000644	CBS domain profile.	151	209			2729773	943829	1439	0	0	0	2586	0	46
47	SMART:SM00116	IPR000644		155	204			2729767	943829	1	0	0	0	2586	0	47
48	SUPERFAMILY:SSF54106	IPR036779	LysM domain superfamily	172	221			821002	943829	711	15	0	1	2586	0	48
49	PROSITE_PROFILES:PS51782	IPR018392	LysM domain profile.	173	220			820991	943829	707	15	0	1	2586	0	49
50	CDD:cd00118	IPR018392	LysM	173	220			820996	943829	708	15	0	1	2586	0	50
51	SMART:SM00257	IPR018392		174	221			820955	943829	1	15	0	1	2586	0	51
52	PRINTS:PR00143	IPR002020	Citrate synthase signature	175	189			1955146	943829	3223	15	0	1	2586	0	52
53	PFAM:PF01476	IPR018392	LysM domain	175	221	32	9.1E-8	820963	943829	705	15	0	1	2586	0	53
54	PFAM:PF07949	IPR012505	YbbR-like protein	222	299	44.6	1.4E-11	2696326	943829	2736	0	0	0	2586	0	54
55	PRINTS:PR00143	IPR002020	Citrate synthase signature	231	247			1955143	943829	3223	15	0	1	2586	0	55
56	PROSITE_PROFILES:PS51782	IPR018392	LysM domain profile.	236	282			820993	943829	707	15	0	1	2586	0	56
57	CDD:cd00118	IPR018392	LysM	237	282			820999	943829	708	15	0	1	2586	0	57
58	SMART:SM00257	IPR018392		237	283			820957	943829	1	15	0	1	2586	0	58
59	PFAM:PF01476	IPR018392	LysM domain	238	283	22	0.00013	820982	943829	705	15	0	1	2586	0	59
60	PRINTS:PR00143	IPR002020	Citrate synthase signature	254	283			1955144	943829	3223	15	0	1	2586	0	60
61	SUPERFAMILY:SSF54106	IPR036779	LysM domain superfamily	297	342			821000	943829	711	15	0	1	2586	0	61
62	PROSITE_PROFILES:PS51782	IPR018392	LysM domain profile.	297	341			820990	943829	707	15	0	1	2586	0	62
63	CDD:cd00118	IPR018392	LysM	298	341			820997	943829	708	15	0	1	2586	0	63
64	SMART:SM00257	IPR018392		298	342			820959	943829	1	15	0	1	2586	0	64
65	PFAM:PF01476	IPR018392	LysM domain	299	342	20.8	0.0003	820983	943829	705	15	0	1	2586	0	65
66	PRINTS:PR00143	IPR002020	Citrate synthase signature	386	403			1955145	943829	3223	15	0	1	2586	0	66
67	PRINTS:PR00143	IPR002020	Citrate synthase signature	406	421			1955147	943829	3223	15	0	1	2586	0	67
68	SUPERFAMILY:SSF53822	IPR028082	Periplasmic binding protein-like I	409	663			821004	943829	860	15	0	1	2586	0	68

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