Cellulosome Database Search

This page is just for checking and is not meant to be part of the public site.

We will take the links to it out when ready.

Genome ifo

GCF_003208175.1: Ruminiclostridium sufflavum, DSM 19573 [+] (ncbi)

Genbanks info:

Genbank_acc: WP_110462532.1:FCBLKBGM_02478
Genome uid: 31
6812-7540 [+] (242)

Sequence:

NAYLDLLMYFSIYSFLGWVMETVFASLKEKKLVNRGFLSGFFCPIYGFGAILIIQSSKLIGAAVEDYSASLITNILLSIF
LVTLLEFITGALLEKIFNCKWWDYSSNAANIKGYICIKYSILWGLLAFLLVQVVHPAVVQVVAVIPSVTKGFMAVLFLSY
VIIDTGKSVIDALSLRKVILNYSGLSINKYYQKVIKYKRFFIAFPNLLILNAGLVNHDIRSIINDRMDKIKTELKSRFQQ
L

	extraction_method	ipr_acc	domain	start	end	score	evalue	rowid	gbid	domain_id	mod_id	cat_id	redundant	used	ord	mod_group
1	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	0	6			1054699	96029	3	136:Membrane Protein	15	0	1	283	0	1
2	DeepTMHMM:outside		outside	1	4			1002901	96029	10025	15	0	1	283	0	2
3	DeepTMHMM:TMhelix		TMhelix	5	25			1002902	96029	2056	141:DeepTMHMM: helix	15	0	1	283	5	3
4	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	6	25			1054695	96029	5	136:Membrane Protein	15	0	1	283	0	4
5	PFAM:PF06541	IPR010540	Putative ABC-transporter type IV	8	169	158.5	0	1054693	96029	3511	15	0	1	283	0	5
6	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	25	36			1054768	96029	18	136:Membrane Protein	15	0	1	283	0	6
7	DeepTMHMM:inside		inside	26	40			1002903	96029	9730	15	0	1	283	0	7
8	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	36	56			1054694	96029	5	136:Membrane Protein	15	0	1	283	0	8
9	DeepTMHMM:TMhelix		TMhelix	41	58			1002904	96029	2056	141:DeepTMHMM: helix	15	0	1	283	5	9
10	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	56	67			1054700	96029	3	136:Membrane Protein	15	0	1	283	0	10
11	DeepTMHMM:outside		outside	59	71			1002905	96029	10025	15	0	1	283	0	11
12	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	67	94			1054696	96029	5	136:Membrane Protein	15	0	1	283	0	12
13	DeepTMHMM:TMhelix		TMhelix	72	92			1002906	96029	2056	141:DeepTMHMM: helix	15	0	1	283	5	13
14	DeepTMHMM:inside		inside	93	117			1002907	96029	9730	15	0	1	283	0	14
15	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	94	114			1054769	96029	18	136:Membrane Protein	15	0	1	283	0	15
16	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	114	136			1054698	96029	5	136:Membrane Protein	15	0	1	283	0	16
17	DeepTMHMM:TMhelix		TMhelix	118	135			1002908	96029	2056	141:DeepTMHMM: helix	15	0	1	283	5	17
18	DeepTMHMM:outside		outside	136	152			1002909	96029	10025	15	0	1	283	0	18
19	PHOBIUS:NON_CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the extracellular region.	136	141			1054766	96029	3	136:Membrane Protein	15	0	1	283	0	19
20	PHOBIUS:TRANSMEMBRANE		Region of a membrane-bound protein predicted to be embedded in the membrane.	141	164			1054697	96029	5	136:Membrane Protein	15	0	1	283	0	20
21	DeepTMHMM:TMhelix		TMhelix	153	171			1002910	96029	2056	141:DeepTMHMM: helix	15	0	1	283	5	21
22	PHOBIUS:CYTOPLASMIC_DOMAIN		Region of a membrane-bound protein predicted to be outside the membrane, in the cytoplasm.	164	242			1054767	96029	18	136:Membrane Protein	15	0	1	283	0	22
23	DeepTMHMM:inside		inside	172	242			1002911	96029	9730	15	0	1	283	0	23

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