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NEIHKHHH_03917 Locus tags: • Sequence Length: 338

Pseudobacteroides cellulosolvens, DSM 2933 GCF_001262605.1

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sigF NEIHKHHH_03917whiA NEIHKHHH_03922 
    [PF10298]_[PF14527]_[PF02650]

    [19:PF10298]_[134:PF14527]_[228:PF02650]

    [19:IPR018478]_[129:IPR027434]_[134:IPR039518]_[228:IPR023054]

Looking for similar signatures in the working genomes

PF10298:WhiA_N. WhiA N-terminal LAGLIDADG-like domain

Found 32 similar signatures
Acetivibrio thermocellus, DSM 1313 LOMAGDGF_0218521-108
Clostridium acetobutylicum, DSM 1731 WP_010963835.1:FHOCHPCF_0055820-106
Acetivibrio alkalicellulosi, DSM 17461 2510062665:NJMEOJLD_0286129-114
Pseudobacteroides cellulosolvens, DSM 2933 WP_036936645.1:NEIHKHHH_0391719-106
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11288:GJLLLGJL_0027818-104
Paenibacillus guangzhouensis, KCTC 33171 WP_152395650.1:KDFAKKPF_0469618-103
Clostridium acetobutylicum, ATCC 824 WP_010963835.1:OJAMHIDJ_0055920-106
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698388.1:PROKKA_0100619-105
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0199719-105
FD_YE_37_9_2, AnGL4 AnGL4_0195119-107
Syntrophomonas curvata, Scurva Scurva_0033218-104
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0157519-105
Syntrophomonas wolfei methylbutyratica, Swm Swm_0025118-104
Terrisporobacter hibernicus, AnGL54 AnGL54_0346519-107
Paraclostridium benzoelyticum, AnGL27 AnGL27_0092318-107
FD-YE-37-9-3, AnGL29 AnGL29_0267619-107
Syntrophomonas erecta, GB-438 Ga0610585_0199719-105
Dietzia cinnamea, 55 PaGL#56_0163319-104
Exiguobacterium mexicanum, AnGL24 AnGL24_0216519-104
Clostridium subterminale, CB-LS10-1 AnGL53_0313621-107
Priestia megaterium, 10L1 PaGL#57_0249018-103
Geodermatophilus sp., RDM14 PaGL#36_0281917-102
Fictibacillus phosphorivorans, TY7 PaGL#38_0402018-103
Syntrophomonas wolfei, saponavida Swsap_0138219-90
Bacillus subtilis, 30VD-1 PaGL#66_0082418-103
Peribacillus frigoritolerans, 30N-5 PaGL#67_0058918-103
Micromonospora inositola, Utrum1 PaGL#61_0519318-104
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0029519-107
Niallia taxi, AG-1 PaGL#37_0339218-103
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_0099918-89
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11288:Swol_0027818-104
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14223:Szehn_0236818-106

PF14527:LAGLIDADG_WhiA. WhiA LAGLIDADG-like domain

Found 34 similar signatures
Acetivibrio thermocellus, DSM 1313 LOMAGDGF_02185129-221
Clostridium acetobutylicum, DSM 1731 WP_010963835.1:FHOCHPCF_00558131-223
Acetivibrio alkalicellulosi, DSM 17461 2510062665:NJMEOJLD_02861138-230
Pseudobacteroides cellulosolvens, DSM 2933 WP_036936645.1:NEIHKHHH_03917134-226
Ruminococcus albus_7, DSM 20455 WP_013497939.1:HCIAFFOI_01294125-215
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11288:GJLLLGJL_00278130-222
Paenibacillus guangzhouensis, KCTC 33171 WP_152395650.1:KDFAKKPF_04696124-217
Clostridium acetobutylicum, ATCC 824 WP_010963835.1:OJAMHIDJ_00559131-223
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698388.1:PROKKA_01006126-218
Syntrophomonas erecta, DSM 16215 OINOEOOJ_01997131-223
FD_YE_37_9_2, AnGL4 AnGL4_01951128-220
Syntrophomonas curvata, Scurva Scurva_00332128-220
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01575131-223
Syntrophomonas wolfei methylbutyratica, Swm Swm_00251130-222
Terrisporobacter hibernicus, AnGL54 AnGL54_03465130-222
Paraclostridium benzoelyticum, AnGL27 AnGL27_00923130-222
FD-YE-37-9-3, AnGL29 AnGL29_02676128-220
Syntrophomonas erecta, GB-438 Ga0610585_01997131-223
Dietzia cinnamea, 55 PaGL#56_01633126-218
Exiguobacterium mexicanum, AnGL24 AnGL24_02165125-218
Clostridium subterminale, CB-LS10-1 AnGL53_03136130-222
Priestia megaterium, 10L1 PaGL#57_02490124-217
Geodermatophilus sp., RDM14 PaGL#36_02819124-216
Fictibacillus phosphorivorans, TY7 PaGL#38_04020124-216
Syntrophomonas wolfei, saponavida Swsap_01382128-220
Bacillus subtilis, 30VD-1 PaGL#66_00824124-217
Peribacillus frigoritolerans, 30N-5 PaGL#67_00589124-217
Micromonospora inositola, Utrum1 PaGL#61_05193127-218
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00295130-222
Niallia taxi, AG-1 PaGL#37_03392124-217
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_00999123-215
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11288:Swol_00278130-222
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14223:Szehn_02368128-220
Ruminococcus callidus, ATCC 27760 Rcal_00738117-209

PF02650:HTH_WhiA. WhiA C-terminal HTH domain

Found 34 similar signatures
Acetivibrio thermocellus, DSM 1313 LOMAGDGF_02185223-307
Clostridium acetobutylicum, DSM 1731 WP_010963835.1:FHOCHPCF_00558225-309
Acetivibrio alkalicellulosi, DSM 17461 2510062665:NJMEOJLD_02861232-316
Pseudobacteroides cellulosolvens, DSM 2933 WP_036936645.1:NEIHKHHH_03917228-312
Ruminococcus albus_7, DSM 20455 WP_013497939.1:HCIAFFOI_01294217-301
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11288:GJLLLGJL_00278224-306
Paenibacillus guangzhouensis, KCTC 33171 WP_152395650.1:KDFAKKPF_04696219-303
Clostridium acetobutylicum, ATCC 824 WP_010963835.1:OJAMHIDJ_00559225-309
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698388.1:PROKKA_01006220-304
Syntrophomonas erecta, DSM 16215 OINOEOOJ_01997225-309
FD_YE_37_9_2, AnGL4 AnGL4_01951222-306
Syntrophomonas curvata, Scurva Scurva_00332222-306
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01575225-309
Syntrophomonas wolfei methylbutyratica, Swm Swm_00251224-306
Terrisporobacter hibernicus, AnGL54 AnGL54_03465224-308
Paraclostridium benzoelyticum, AnGL27 AnGL27_00923224-308
FD-YE-37-9-3, AnGL29 AnGL29_02676222-306
Syntrophomonas erecta, GB-438 Ga0610585_01997225-309
Dietzia cinnamea, 55 PaGL#56_01633220-303
Exiguobacterium mexicanum, AnGL24 AnGL24_02165220-305
Clostridium subterminale, CB-LS10-1 AnGL53_03136224-308
Priestia megaterium, 10L1 PaGL#57_02490219-304
Geodermatophilus sp., RDM14 PaGL#36_02819218-301
Fictibacillus phosphorivorans, TY7 PaGL#38_04020218-303
Syntrophomonas wolfei, saponavida Swsap_01382222-306
Bacillus subtilis, 30VD-1 PaGL#66_00824219-304
Peribacillus frigoritolerans, 30N-5 PaGL#67_00589219-304
Micromonospora inositola, Utrum1 PaGL#61_05193220-303
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00295224-308
Niallia taxi, AG-1 PaGL#37_03392219-304
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_00999217-301
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11288:Swol_00278224-306
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14223:Szehn_02368222-306
Ruminococcus callidus, ATCC 27760 Rcal_00738211-294
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