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HCIAFFOI_01135 Locus tags: • Sequence Length: 340

Ruminococcus albus_7, DSM 20455 GCF_000179635.2

5050100100150150200200250250300300350350
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lysS HCIAFFOI_01131 HCIAFFOI_01133 HCIAFFOI_01134 
    [PF08220]_[PF13280]

    [37:PF08220]_[139:PF13280]

    [37:IPR001034]_[139:IPR026881]

Looking for similar signatures in the working genomes

PF08220:HTH_DeoR. DeoR-like helix-turn-helix domain

Found 152 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003513190.1:LOMAGDGF_000754-59
WP_011837932.1:LOMAGDGF_013254-42
Clostridium acetobutylicum, DSM 1731 WP_010963440.1:FHOCHPCF_001255-59
WP_010963554.1:FHOCHPCF_002605-60
WP_241393159.1:FHOCHPCF_014575-60
WP_010964739.1:FHOCHPCF_014823-58
WP_010966233.1:FHOCHPCF_029975-61
WP_010966238.1:FHOCHPCF_030025-58
WP_010966249.1:FHOCHPCF_030137-59
Pseudobacteroides cellulosolvens, DSM 2933 WP_036944339.1:NEIHKHHH_0131310-44
Ruminococcus albus_7, DSM 20455 WP_013497796.1:HCIAFFOI_0113537-65
Paenibacillus guangzhouensis, KCTC 33171 WP_152392836.1:KDFAKKPF_013895-60
WP_152393248.1:KDFAKKPF_018655-60
WP_265333510.1:KDFAKKPF_020825-60
WP_152397204.1:KDFAKKPF_022846-60
WP_152393831.1:KDFAKKPF_025357-59
WP_152393852.1:KDFAKKPF_0256012-64
WP_152394200.1:KDFAKKPF_029567-60
WP_152394789.1:KDFAKKPF_036485-61
WP_152395247.1:KDFAKKPF_041797-59
WP_152395565.1:KDFAKKPF_045937-59
WP_152396188.1:KDFAKKPF_053317-60
WP_152396803.1:KDFAKKPF_0606111-64
Clostridium acetobutylicum, ATCC 824 WP_010963440.1:OJAMHIDJ_001255-59
WP_010963554.1:OJAMHIDJ_002605-60
WP_241393159.1:OJAMHIDJ_014615-60
WP_010964739.1:OJAMHIDJ_014863-58
WP_010966233.1:OJAMHIDJ_030065-61
WP_010966238.1:OJAMHIDJ_030115-58
WP_010966249.1:OJAMHIDJ_030227-59
FD_25_22, AnGL7 AnGL7_004685-60
AnGL7_026375-57
AnGL7_032905-59
AnGL7_035905-61
FD_25_27, AnGL8 AnGL8_012313-57
AnGL8_002093-59
AnGL8_0144810-64
AnGL8_017817-42
AnGL8_020085-60
AnGL8_0252410-66
AnGL8_030359-61
AnGL8_030905-59
FD_SO4_25_1_F22, AnGL30 AnGL30_012473-58
FD_YE_25_21, AnGL21 AnGL21_039290-49
AnGL21_039335-58
AnGL21_040594-61
AnGL21_042555-58
AnGL21_042595-58
AnGL21_022125-60
AnGL21_027828-61
AnGL21_029334-47
AnGL21_031835-60
AnGL21_031845-59
AnGL21_033935-60
FD_YE_37_3, AnGL26 AnGL26_007446-58
AnGL26_007526-58
FD_YE_37_9_2, AnGL4 AnGL4_008225-60
AnGL4_014455-59
AnGL4_014575-61
AnGL4_014965-57
AnGL4_016033-58
Terrisporobacter hibernicus, AnGL54 AnGL54_045505-61
AnGL54_045575-60
AnGL54_018777-60
FD-25-21, AnGL21 AnGL21_000355-57
AnGL21_023896-60
AnGL21_026955-61
AnGL21_028795-61
AnGL21_029725-59
Sunxiuqinia elliptica, AnGL22 AnGL22_007456-58
AnGL22_007536-58
Paraclostridium benzoelyticum, AnGL27 AnGL27_005525-59
FD-MS-7-8, AnGL9 AnGL9_010777-59
FD-YE-37-9-3, AnGL29 AnGL29_015475-60
AnGL29_021705-59
AnGL29_021825-61
AnGL29_022215-57
AnGL29_023283-58
Methylobacterium radiotolerans, GTSA1 PaGL#34_0243420-76
PaGL#34_035884-57
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0017233-86
PaGL#35_001775-58
PaGL#35_049126-56
PaGL#35_052335-59
PaGL#35_052576-60
PaGL#35_064375-57
Variovorax sp., EBFNA2 PaGL#33_022845-62
PaGL#33_058615-56
Variovorax paradoxus, 2u118 PaGL#32_034995-62
PaGL#32_050745-56
Dietzia cinnamea, 55 PaGL#56_031535-57
Maridesulfovibrio salexigens, AnGL23 AnGL23_0003421-77
Exiguobacterium mexicanum, AnGL24 AnGL24_014845-59
AnGL24_017037-63
AnGL24_0204110-54
Priestia megaterium, 10L1 PaGL#57_0271010-53
PaGL#57_039785-56
PaGL#57_040275-60
PaGL#57_047505-61
PaGL#57_053395-61
Variovorax paradoxus, SPNA7 PaGL#43_035385-62
PaGL#43_052705-56
Geodermatophilus sp., RDM14 PaGL#36_0154034-63
PaGL#36_016395-61
PaGL#36_041168-60
Methylorubrum populi, CTY4 PaGL#39_012025-58
PaGL#39_0336336-90
Fictibacillus phosphorivorans, TY7 PaGL#38_000140-47
PaGL#38_008675-61
PaGL#38_018175-57
PaGL#38_022437-46
PaGL#38_0362410-54
PaGL#38_043315-59
Bacillus subtilis, 30VD-1 PaGL#66_003224-61
PaGL#66_006735-59
PaGL#66_011935-61
PaGL#66_0133510-54
PaGL#66_026955-58
PaGL#66_03742171-215
PaGL#66_037955-60
Peribacillus frigoritolerans, 30N-5 PaGL#67_011435-61
PaGL#67_0173710-53
PaGL#67_027105-61
PaGL#67_035435-60
PaGL#67_0401531-70
Micromonospora inositola, Utrum1 PaGL#61_020185-58
PaGL#61_034175-58
PaGL#61_034298-60
PaGL#61_0485312-59
PaGL#61_0575016-61
PaGL#61_062625-58
PaGL#61_066975-59
Sphingomonas sp., CR2A3 PaGL#62_0043513-66
PaGL#62_0047114-67
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_013805-61
AnGL54_013875-60
AnGL54_026817-60
Niallia taxi, AG-1 PaGL#37_040875-61
PaGL#37_005725-58
PaGL#37_010848-50
PaGL#37_011565-61
PaGL#37_013717-46
PaGL#37_021115-61
PaGL#37_0222439-93
PaGL#37_0310710-53
Mucilaginibacter gossypii, cycad 4 PaGL#42_018285-58
PaGL#42_025686-58
PaGL#42_034975-59
PaGL#42_049068-53
Ruminococcus callidus, ATCC 27760 Rcal_017005-50
Rcal_018625-50
Rcal_0227059-94

PF13280:WYL. WYL domain

Found 121 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_014522590.1:LOMAGDGF_00365272-473
WP_003514386.1:LOMAGDGF_00366169-344
WP_003517832.1:LOMAGDGF_0230719-70
Clostridium acetobutylicum, DSM 1731 WP_010966655.1:FHOCHPCF_03438218-384
WP_010966760.1:FHOCHPCF_03545130-296
Acetivibrio alkalicellulosi, DSM 17461 2510060018:NJMEOJLD_00276138-302
2510060114:NJMEOJLD_00373134-294
2510061744:NJMEOJLD_01959157-329
2510061745:NJMEOJLD_01960237-423
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946425.1:NEIHKHHH_00445237-423
WP_036946428.1:NEIHKHHH_00446157-329
WP_036944111.1:NEIHKHHH_02741142-311
NEIHKHHH_03022154-327
WP_028308446.1:NEIHKHHH_03034141-324
WP_036939000.1:NEIHKHHH_03277135-301
WP_036944410.1:NEIHKHHH_04559139-314
Ruminococcus albus_7, DSM 20455 WP_013483653.1:HCIAFFOI_03779154-342
WP_013497796.1:HCIAFFOI_01135139-316
WP_013497815.1:HCIAFFOI_01154154-343
WP_013498810.1:HCIAFFOI_02234143-317
WP_013498811.1:HCIAFFOI_02235220-390
WP_013499346.1:HCIAFFOI_02848143-323
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111452:GJLLLGJL_01422138-305
Ga0065332_112440:GJLLLGJL_0239477-138
Paenibacillus guangzhouensis, KCTC 33171 WP_193726786.1:KDFAKKPF_0127790-246
WP_227793478.1:KDFAKKPF_01509137-305
WP_152394881.1:KDFAKKPF_03753139-308
WP_152394894.1:KDFAKKPF_03767125-300
KDFAKKPF_03951132-209
WP_152395163.1:KDFAKKPF_04091140-316
WP_152395227.1:KDFAKKPF_04157127-289
WP_152395715.1:KDFAKKPF_04782138-296
WP_152396020.1:KDFAKKPF_05140140-313
WP_152396026.1:KDFAKKPF_05150140-310
WP_152396069.1:KDFAKKPF_05199138-306
WP_152396123.1:KDFAKKPF_05256140-313
WP_152396151.1:KDFAKKPF_05286158-329
WP_152396599.1:KDFAKKPF_0580883-259
WP_152396600.1:KDFAKKPF_05809232-429
Clostridium acetobutylicum, ATCC 824 WP_010966655.1:OJAMHIDJ_03449218-384
WP_010966760.1:OJAMHIDJ_03557130-296
FD_25_22, AnGL7 AnGL7_01803124-194
FD_25_27, AnGL8 AnGL8_00031108-196
FD_SO4_25_1_F22, AnGL30 AnGL30_00301157-346
AnGL30_01403154-333
AnGL30_01583153-327
FD_YE_37_3, AnGL26 AnGL26_01989140-311
FD_YE_37_8_2, AnGL3 AnGL3_00087119-294
AnGL3_01356128-294
FD_YE_37_9_2, AnGL4 AnGL4_01247128-293
Syntrophus buswellii, Sbus Sbus_02604146-321
Syntrophomonas curvata, Scurva Scurva_00737139-304
Scurva_00769147-307
Scurva_013544-64
Syntrophomonas wolfei methylbutyratica, Swm Swm_01111182-360
Swm_02449140-310
Terrisporobacter hibernicus, AnGL54 AnGL54_04079141-248
AnGL54_00871130-306
AnGL54_01098138-314
FD-25-21, AnGL21 AnGL21_00736126-196
AnGL21_01427107-183
AnGL21_01707119-202
AnGL21_01719126-197
Sunxiuqinia elliptica, AnGL22 AnGL22_01986140-311
Paraclostridium benzoelyticum, AnGL27 AnGL27_00015132-299
AnGL27_02161145-314
FD-YE-37-9-3, AnGL29 AnGL29_01972128-293
Methylobacterium radiotolerans, GTSA1 PaGL#34_04629143-225
PaGL#34_05364125-245
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00976154-331
PaGL#35_02772140-311
Variovorax sp., EBFNA2 PaGL#33_02158136-232
Variovorax paradoxus, 2u118 PaGL#32_01872136-228
Dietzia cinnamea, 55 PaGL#56_01552148-306
PaGL#56_01553147-315
PaGL#56_02444140-315
Exiguobacterium mexicanum, AnGL24 AnGL24_01524139-322
AnGL24_02513138-291
Clostridium subterminale, CB-LS10-1 AnGL53_01817125-295
AnGL53_01927138-306
AnGL53_01949130-293
Priestia megaterium, 10L1 PaGL#57_04238138-305
Variovorax paradoxus, SPNA7 PaGL#43_01791136-228
Geodermatophilus sp., RDM14 PaGL#36_00713679-745
PaGL#36_02324144-316
PaGL#36_02325150-319
Methylorubrum populi, CTY4 PaGL#39_0230257-143
Fictibacillus phosphorivorans, TY7 PaGL#38_01470140-311
PaGL#38_01855139-297
Syntrophomonas wolfei, saponavida Swsap_00027247-423
Bacillus subtilis, 30VD-1 PaGL#66_02223139-307
Micromonospora inositola, Utrum1 PaGL#61_02070150-310
PaGL#61_02889149-319
PaGL#61_02890148-313
PaGL#61_03860147-328
PaGL#61_03981139-318
PaGL#61_04594146-317
PaGL#61_05487137-217
PaGL#61_06607139-318
Sphingomonas sp., CR2A3 PaGL#62_03109138-213
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00908141-248
AnGL54_01601130-306
AnGL54_01826138-314
Niallia taxi, AG-1 PaGL#37_04560139-303
PaGL#37_03934175-314
MPOB, Sfum 639703597:Sfum_02900150-328
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_1248:Spalm_02672242-417
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111452:Swol_01422138-305
Ga0065332_112440:Swol_0239477-138
Syntrophomonas zehnderi, OL-4 Szehn Szehn_00942149-316
Szehn_02613240-415
Syntrophus aciditrophicus, SB 637859233:SYN_00864133-305
637860007:SYN_01590132-304
637861096:SYN_02583139-315
Syntrophus gentianae, DSM8423 Ga0074853_1324:Sgen_02906139-314
Mucilaginibacter gossypii, cycad 4 PaGL#42_02759139-309
PaGL#42_02784167-343
Ruminococcus callidus, ATCC 27760 Rcal_00695137-315
Rcal_02020143-318
Rcal_02359144-334
Rcal_02897141-318
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