SMPP Home

AnGL28_00604 Locus tags: • Sequence Length: 154

FD_MS_7_1, AnGL28 Batch1_genome_fasta/FD_MS_7_1

5050100100150150200200
Show complete sequence
Click domain (colored bar) to show sequence
AnGL28_00601 AnGL28_00602 AnGL28_00603 AnGL28_00607 AnGL28_00608 AnGL28_00609 
    [SP]_[PF01402]_[PF08753]

    [SP]_[9:PF01402]_[59:PF08753]

    [SP]_[6:IPR010985]_[9:IPR002145]_[57:IPR045865]_[59:IPR014864]

Looking for similar signatures in the working genomes

PF01402:RHH_1. Ribbon-helix-helix protein, copG family

Found 68 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003512783.1:LOMAGDGF_003038-43
Clostridium acetobutylicum, DSM 1731 WP_014519118.1:FHOCHPCF_0397754-81
Acetivibrio alkalicellulosi, DSM 17461 2510061906:NJMEOJLD_021151-37
2510063084:NJMEOJLD_032728-43
Pseudobacteroides cellulosolvens, DSM 2933 WP_036942811.1:NEIHKHHH_027048-43
Ruminococcus albus_7, DSM 20455 WP_013499819.1:HCIAFFOI_033447-41
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_1179:GJLLLGJL_000769-46
Paenibacillus guangzhouensis, KCTC 33171 WP_227793651.1:KDFAKKPF_039698-45
KDFAKKPF_0520240-75
Clostridium acetobutylicum, ATCC 824 WP_014519118.1:OJAMHIDJ_0399054-81
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697544.1:PROKKA_005958-43
WP_244648220.1:PROKKA_0233720-47
Syntrophomonas erecta, DSM 16215 OINOEOOJ_001385-43
OINOEOOJ_012373-41
OINOEOOJ_021529-46
FD_25_22, AnGL7 AnGL7_0091751-90
FD_MS_7_1, AnGL28 AnGL28_006049-45
FD_SO4_37_1, AnGL2 AnGL2_032839-45
FD_YE_25_21, AnGL21 AnGL21_0085725-63
FD_YE_37_3, AnGL26 AnGL26_026834-40
FD_YE_37_8_2, AnGL3 AnGL3_006524-41
Syntrophus buswellii, Sbus Sbus_017825-43
Syntrophomonas curvata, Scurva Scurva_001469-40
Scurva_024815-43
Syntrophomonas erecta sporosyntropha, Sespor Sespor_008675-43
Sespor_014209-46
Sespor_024033-41
Syntrophomonas wolfei methylbutyratica, Swm Swm_000739-46
Swm_022795-43
FD-25-21, AnGL21 AnGL21_0165351-90
Sunxiuqinia elliptica, AnGL22 AnGL22_026804-40
Methylobacterium radiotolerans, GTSA1 PaGL#34_045252-40
Syntrophomonas erecta, GB-438 Ga0610585_001385-43
Ga0610585_012373-41
Ga0610585_021529-46
Variovorax sp., EBFNA2 PaGL#33_040102-41
Dietzia cinnamea, 55 PaGL#56_0044954-90
PaGL#56_0067375-108
Maridesulfovibrio salexigens, AnGL23 AnGL23_002335-42
AnGL23_033479-40
Methanospirillum lacunae, Ki8-1 MLKi8_001205-41
MLKi8_0216519-57
MLKi8_028622-42
Methylorubrum populi, CTY4 PaGL#39_011882-39
Methanospirillum hungatei, GP1 MhGP1_0198016-54
MhGP1_021273-40
MhGP1_0268019-57
MhGP1_027582-42
Methanospirillum stamsii, Pt1 MLKi8_029612-42
MLKi8_0338219-57
Syntrophomonas wolfei, saponavida Swsap_012519-44
Swsap_0177024-43
Bacillus subtilis, 30VD-1 PaGL#66_0372211-45
Methanospirillum.hungatei GP1, MhGP1 8064046771:MhGP1_001452-42
8064046850:MhGP1_0022319-57
8064047421:MhGP1_007763-40
8064047569:MhGP1_0092316-54
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111743:Mhun_0174419-57
Ga0065338_111846:Mhun_018482-42
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_109112:Spalm_015339-46
Spalm_002445-43
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_1179:Swol_000769-46
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_10513:Szehn_004259-46
Szehn_020895-43
Ga0124040_10919:Szehn_005906-43
Syntrophus aciditrophicus, SB 637860361:SYN_019195-43
Syntrophus gentianae, DSM8423 Ga0074853_11911:Sgen_023239-47
Ga0074853_107124:Sgen_012845-43

PF08753:NikR_C. NikR C terminal nickel binding domain

Found 22 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516613.1:LOMAGDGF_0161912-80
Acetivibrio alkalicellulosi, DSM 17461 2510061801:NJMEOJLD_020154-74
FD_MS_7_1, AnGL28 AnGL28_0060459-122
FD_SO4_37_1, AnGL2 AnGL2_0328359-122
FD_YE_37_3, AnGL26 AnGL26_0268353-129
FD_YE_37_8_2, AnGL3 AnGL3_0065253-129
Syntrophus buswellii, Sbus Sbus_0178254-130
Sunxiuqinia elliptica, AnGL22 AnGL22_0268053-129
FD-MS-7-8, AnGL9 AnGL9_0089760-128
Methylobacterium radiotolerans, GTSA1 PaGL#34_0452554-130
Variovorax sp., EBFNA2 PaGL#33_0401057-133
Maridesulfovibrio salexigens, AnGL23 AnGL23_0023355-131
Methanospirillum lacunae, Ki8-1 MLKi8_0216571-147
Methylorubrum populi, CTY4 PaGL#39_0118853-129
Methanospirillum hungatei, GP1 MhGP1_0198068-144
MhGP1_0268071-147
Methanospirillum stamsii, Pt1 MLKi8_0338271-147
Methanospirillum.hungatei GP1, MhGP1 8064046850:MhGP1_0022371-147
8064047569:MhGP1_0092368-144
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_111743:Mhun_0174471-147
Syntrophus aciditrophicus, SB 637860361:SYN_0191954-130
Syntrophus gentianae, DSM8423 Ga0074853_107124:Sgen_0128454-130
Search by locus tag: Search
↑ Top




v4.1 @copyright 2025 UCLA