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Scurva_01178 Locus tags: • Sequence Length: 256

Syntrophomonas curvata, Scurva Batch1_genome_fasta/S_curvata

5050100100150150200200250250300300
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Scurva_01173 Scurva_01176 Scurva_01179 Scurva_01180 Scurva_01181 Scurva_01182 Scurva_01183 
    [PF14622]_[PF00035]

    [24:PF14622]_[161:PF00035]

    [7:IPR000999]_[10:IPR036389]_[22:IPR000999]_[24:IPR000999]_[24:IPR000999]_[160:IPR014720]_[161:IPR014720]_[161:IPR014720]

Looking for similar signatures in the working genomes

PF14622:Ribonucleas_3_3. Ribonuclease-III-like

Found 64 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003518593.1:LOMAGDGF_0133227-152
Clostridium acetobutylicum, DSM 1731 WP_013913645.1:FHOCHPCF_0179120-145
Acetivibrio alkalicellulosi, DSM 17461 2510064122:NJMEOJLD_0429127-152
Pseudobacteroides cellulosolvens, DSM 2933 WP_036944346.1:NEIHKHHH_0130628-152
Ruminococcus albus_7, DSM 20455 WP_013499657.1:HCIAFFOI_0317619-147
WP_013483357.1:HCIAFFOI_03447157-280
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11805:GJLLLGJL_0079121-147
Paenibacillus guangzhouensis, KCTC 33171 WP_152392427.1:KDFAKKPF_0092717-148
Clostridium acetobutylicum, ATCC 824 WP_010965055.1:OJAMHIDJ_0179920-145
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137695967.1:PROKKA_0208122-151
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0116123-148
FD_25_22, AnGL7 AnGL7_0068120-140
FD_25_27, AnGL8 AnGL8_0166318-141
FD_MS_7_1, AnGL28 AnGL28_0227619-148
FD_SO4_25_1_F22, AnGL30 AnGL30_0121532-156
FD_SO4_37_1, AnGL2 AnGL2_0140519-148
FD_YE_25_21, AnGL21 AnGL21_0043517-140
FD_YE_37_3, AnGL26 AnGL26_0269334-159
FD_YE_37_8_2, AnGL3 AnGL3_0254644-172
FD_YE_37_9_2, AnGL4 AnGL4_0333019-150
Syntrophus buswellii, Sbus Sbus_0108823-147
Syntrophomonas curvata, Scurva Scurva_0117824-147
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0248423-148
Syntrophomonas wolfei methylbutyratica, Swm Swm_0087921-147
Terrisporobacter hibernicus, AnGL54 AnGL54_0207923-149
FD-25-21, AnGL21 AnGL21_0191820-140
Sunxiuqinia elliptica, AnGL22 AnGL22_0269034-159
Paraclostridium benzoelyticum, AnGL27 AnGL27_0316423-149
FD-MS-7-8, AnGL9 AnGL9_0181520-148
FD-YE-37-9-3, AnGL29 AnGL29_0058819-150
Methylobacterium radiotolerans, GTSA1 PaGL#34_0377440-164
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0070932-159
Syntrophomonas erecta, GB-438 Ga0610585_0116123-148
Variovorax sp., EBFNA2 PaGL#33_0474422-142
Variovorax paradoxus, 2u118 PaGL#32_0138517-137
Dietzia cinnamea, 55 PaGL#56_0181319-146
Maridesulfovibrio salexigens, AnGL23 AnGL23_0022221-144
Exiguobacterium mexicanum, AnGL24 AnGL24_0124143-174
Clostridium subterminale, CB-LS10-1 AnGL53_0113221-145
Priestia megaterium, 10L1 PaGL#57_0333132-164
Variovorax paradoxus, SPNA7 PaGL#43_0138417-137
Methanospirillum lacunae, Ki8-1 MLKi8_0256219-145
Geodermatophilus sp., RDM14 PaGL#36_0329543-170
Methylorubrum populi, CTY4 PaGL#39_0201436-162
Fictibacillus phosphorivorans, TY7 PaGL#38_0224849-179
Methanospirillum hungatei, GP1 MhGP1_0284919-145
Methanospirillum stamsii, Pt1 MLKi8_0341819-146
Syntrophomonas wolfei, saponavida Swsap_0022223-147
Bacillus subtilis, 30VD-1 PaGL#66_0253732-163
Peribacillus frigoritolerans, 30N-5 PaGL#67_0401029-160
Micromonospora inositola, Utrum1 PaGL#61_0164122-151
Sphingomonas sp., CR2A3 PaGL#62_0255423-139
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0288223-149
Niallia taxi, AG-1 PaGL#37_0137630-162
Methanospirillum.hungatei GP1, MhGP1 8064046678:MhGP1_0005419-145
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112040:Mhun_0203919-145
MPOB, Sfum 639701639:Sfum_0091019-146
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_0275218-145
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11805:Swol_0079121-147
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14927:Szehn_0255219-146
Syntrophus aciditrophicus, SB 637860643:SYN_0218822-149
Syntrophus gentianae, DSM8423 Ga0074853_11536:Sgen_0204425-149
Mucilaginibacter gossypii, cycad 4 PaGL#42_0428132-160
Ruminococcus callidus, ATCC 27760 Rcal_0256421-149

PF00035:dsrm. Double-stranded RNA binding motif

Found 58 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003518593.1:LOMAGDGF_01332167-233
Clostridium acetobutylicum, DSM 1731 WP_013913645.1:FHOCHPCF_01791161-227
Acetivibrio alkalicellulosi, DSM 17461 2510064122:NJMEOJLD_04291167-234
Pseudobacteroides cellulosolvens, DSM 2933 WP_036944346.1:NEIHKHHH_01306167-234
Ruminococcus albus_7, DSM 20455 WP_013499657.1:HCIAFFOI_03176161-226
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11805:GJLLLGJL_00791161-226
Paenibacillus guangzhouensis, KCTC 33171 WP_152392427.1:KDFAKKPF_00927161-225
Clostridium acetobutylicum, ATCC 824 WP_010965055.1:OJAMHIDJ_01799161-227
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137695967.1:PROKKA_02081166-232
Syntrophomonas erecta, DSM 16215 OINOEOOJ_01161163-227
FD_25_22, AnGL7 AnGL7_00681155-222
FD_25_27, AnGL8 AnGL8_01663155-223
FD_MS_7_1, AnGL28 AnGL28_02276161-227
FD_SO4_25_1_F22, AnGL30 AnGL30_01215172-237
FD_SO4_37_1, AnGL2 AnGL2_01405161-227
FD_YE_25_21, AnGL21 AnGL21_00435154-222
FD_YE_37_3, AnGL26 AnGL26_02693173-240
FD_YE_37_8_2, AnGL3 AnGL3_02546185-252
FD_YE_37_9_2, AnGL4 AnGL4_03330159-225
Syntrophus buswellii, Sbus Sbus_01088165-232
Syntrophomonas curvata, Scurva Scurva_01178161-226
Syntrophomonas erecta sporosyntropha, Sespor Sespor_02484163-227
Syntrophomonas wolfei methylbutyratica, Swm Swm_00879161-227
Terrisporobacter hibernicus, AnGL54 AnGL54_02079165-230
FD-25-21, AnGL21 AnGL21_01918155-222
Sunxiuqinia elliptica, AnGL22 AnGL22_02690173-240
Paraclostridium benzoelyticum, AnGL27 AnGL27_03164165-231
FD-MS-7-8, AnGL9 AnGL9_01815161-227
FD-YE-37-9-3, AnGL29 AnGL29_00588159-225
Methylobacterium radiotolerans, GTSA1 PaGL#34_03774178-241
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_00709174-239
Syntrophomonas erecta, GB-438 Ga0610585_01161163-227
Variovorax sp., EBFNA2 PaGL#33_04744159-224
Variovorax paradoxus, 2u118 PaGL#32_01385154-219
Dietzia cinnamea, 55 PaGL#56_01813161-227
Maridesulfovibrio salexigens, AnGL23 AnGL23_00222161-227
Exiguobacterium mexicanum, AnGL24 AnGL24_01241185-249
Clostridium subterminale, CB-LS10-1 AnGL53_01132160-224
Priestia megaterium, 10L1 PaGL#57_03331176-241
Variovorax paradoxus, SPNA7 PaGL#43_01384154-219
Geodermatophilus sp., RDM14 PaGL#36_03295186-252
Methylorubrum populi, CTY4 PaGL#39_02014176-240
Fictibacillus phosphorivorans, TY7 PaGL#38_02248191-256
Syntrophomonas wolfei, saponavida Swsap_00222161-227
Bacillus subtilis, 30VD-1 PaGL#66_02537176-242
Peribacillus frigoritolerans, 30N-5 PaGL#67_04010172-239
Micromonospora inositola, Utrum1 PaGL#61_01641168-233
Sphingomonas sp., CR2A3 PaGL#62_02554154-220
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_02882165-230
Niallia taxi, AG-1 PaGL#37_01376174-238
MPOB, Sfum 639701639:Sfum_00910167-233
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_02752159-224
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11805:Swol_00791161-226
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_14927:Szehn_02552160-224
Syntrophus aciditrophicus, SB 637860643:SYN_02188165-232
Syntrophus gentianae, DSM8423 Ga0074853_11536:Sgen_02044165-232
Mucilaginibacter gossypii, cycad 4 PaGL#42_04281174-239
Ruminococcus callidus, ATCC 27760 Rcal_02564165-230
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