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PaGL#34_03093 Locus tags: • Sequence Length: 322

Methylobacterium radiotolerans, GTSA1 Batch2_genome_fasta/M.radiotolerans.GTSA1

5050100100150150200200250250300300350350
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PaGL#34_03089 PaGL#34_03092 PaGL#34_03093 PaGL#34_03094 PaGL#34_03096 PaGL#34_03097 PaGL#34_03098 
    [PF01379]_[PF03900]

    [5:PF01379]_[226:PF03900]

    [5:IPR022417]_[44:IPR000860]_[75:IPR000860]_[123:IPR000860]_[142:IPR000860]_[221:IPR036803]_[226:IPR022418]_[229:IPR000860]

Looking for similar signatures in the working genomes

PF01379:Porphobil_deam. Porphobilinogen deaminase, dipyromethane cofactor binding domain

Found 60 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003513110.1:LOMAGDGF_001152-203
Clostridium acetobutylicum, DSM 1731 WP_010963424.1:FHOCHPCF_001082-206
Acetivibrio alkalicellulosi, DSM 17461 2510063504:NJMEOJLD_036833-202
Pseudobacteroides cellulosolvens, DSM 2933 WP_036939054.1:NEIHKHHH_033164-209
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11714:GJLLLGJL_006993-210
Paenibacillus guangzhouensis, KCTC 33171 WP_152391700.1:KDFAKKPF_000933-215
Clostridium acetobutylicum, ATCC 824 WP_010963424.1:OJAMHIDJ_001082-206
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696893.1:PROKKA_029323-214
WP_137698966.1:PROKKA_031713-203
Syntrophomonas erecta, DSM 16215 OINOEOOJ_011953-208
FD_25_22, AnGL7 AnGL7_036325-212
FD_25_27, AnGL8 AnGL8_030715-212
FD_MS_7_1, AnGL28 AnGL28_008198-214
FD_SO4_37_1, AnGL2 AnGL2_034988-214
FD_YE_25_21, AnGL21 AnGL21_030486-213
FD_YE_37_3, AnGL26 AnGL26_035425-212
FD_YE_37_8_2, AnGL3 AnGL3_012545-212
Syntrophus buswellii, Sbus Sbus_020362-179
Syntrophomonas curvata, Scurva Scurva_011364-209
Syntrophomonas erecta sporosyntropha, Sespor Sespor_024503-208
Syntrophomonas wolfei methylbutyratica, Swm Swm_007543-210
Terrisporobacter hibernicus, AnGL54 AnGL54_038372-210
FD-25-21, AnGL21 AnGL21_026545-212
Sunxiuqinia elliptica, AnGL22 AnGL22_035375-212
Paraclostridium benzoelyticum, AnGL27 AnGL27_035453-211
FD-MS-7-8, AnGL9 AnGL9_000767-213
Methylobacterium radiotolerans, GTSA1 PaGL#34_030935-212
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_015594-215
Syntrophomonas erecta, GB-438 Ga0610585_011953-208
Variovorax sp., EBFNA2 PaGL#33_0477430-235
Variovorax paradoxus, 2u118 PaGL#32_0135710-215
Dietzia cinnamea, 55 PaGL#56_026525-208
Maridesulfovibrio salexigens, AnGL23 AnGL23_026053-211
Exiguobacterium mexicanum, AnGL24 AnGL24_009863-212
Clostridium subterminale, CB-LS10-1 AnGL53_0166516-218
Priestia megaterium, 10L1 PaGL#57_028683-211
Variovorax paradoxus, SPNA7 PaGL#43_0135610-215
Methanospirillum lacunae, Ki8-1 MLKi8_013692-197
Geodermatophilus sp., RDM14 PaGL#36_038638-216
Methylorubrum populi, CTY4 PaGL#39_047780-200
Fictibacillus phosphorivorans, TY7 PaGL#38_034513-212
Methanospirillum hungatei, GP1 MhGP1_015982-197
Methanospirillum stamsii, Pt1 MLKi8_019722-197
Syntrophomonas wolfei, saponavida Swsap_003243-210
Bacillus subtilis, 30VD-1 PaGL#66_015274-212
Peribacillus frigoritolerans, 30N-5 PaGL#67_019623-211
Micromonospora inositola, Utrum1 PaGL#61_065424-210
Sphingomonas sp., CR2A3 PaGL#62_027044-209
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_006672-210
Niallia taxi, AG-1 PaGL#37_028783-212
Methanospirillum.hungatei GP1, MhGP1 8064047960:MhGP1_013042-197
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_1194:Mhun_000942-197
MPOB, Sfum 639703974:Sfum_032851-200
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11648:Spalm_02210432-639
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11714:Swol_006993-210
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_13840:Szehn_021523-208
Syntrophus aciditrophicus, SB 637858882:SYN_005380-208
Syntrophus gentianae, DSM8423 Sgen_0303416-222
Mucilaginibacter gossypii, cycad 4 PaGL#42_0377312-223
Ruminococcus callidus, ATCC 27760 Rcal_019134-206

PF03900:Porphobil_deamC. Porphobilinogen deaminase, C-terminal domain

Found 55 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003513110.1:LOMAGDGF_00115221-287
Clostridium acetobutylicum, DSM 1731 WP_010963424.1:FHOCHPCF_00108220-288
Acetivibrio alkalicellulosi, DSM 17461 2510063504:NJMEOJLD_03683221-286
Pseudobacteroides cellulosolvens, DSM 2933 WP_036939054.1:NEIHKHHH_03316223-293
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11714:GJLLLGJL_00699226-293
Paenibacillus guangzhouensis, KCTC 33171 WP_152391700.1:KDFAKKPF_00093227-300
Clostridium acetobutylicum, ATCC 824 WP_010963424.1:OJAMHIDJ_00108220-288
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696893.1:PROKKA_02932230-297
WP_137698966.1:PROKKA_03171219-286
Syntrophomonas erecta, DSM 16215 OINOEOOJ_01195224-293
FD_25_22, AnGL7 AnGL7_03632226-295
FD_25_27, AnGL8 AnGL8_03071226-295
FD_YE_25_21, AnGL21 AnGL21_03048227-296
FD_YE_37_3, AnGL26 AnGL26_03542227-296
FD_YE_37_8_2, AnGL3 AnGL3_01254224-295
Syntrophus buswellii, Sbus Sbus_02036193-262
Syntrophomonas curvata, Scurva Scurva_01136223-293
Syntrophomonas erecta sporosyntropha, Sespor Sespor_02450224-293
Syntrophomonas wolfei methylbutyratica, Swm Swm_00754226-293
Terrisporobacter hibernicus, AnGL54 AnGL54_03837224-293
FD-25-21, AnGL21 AnGL21_02654226-295
Sunxiuqinia elliptica, AnGL22 AnGL22_03537227-296
Paraclostridium benzoelyticum, AnGL27 AnGL27_03545224-292
Methylobacterium radiotolerans, GTSA1 PaGL#34_03093226-295
Syntrophomonas erecta, GB-438 Ga0610585_01195224-293
Variovorax sp., EBFNA2 PaGL#33_04774248-322
Variovorax paradoxus, 2u118 PaGL#32_01357228-302
Dietzia cinnamea, 55 PaGL#56_02652222-320
Maridesulfovibrio salexigens, AnGL23 AnGL23_02605224-293
Exiguobacterium mexicanum, AnGL24 AnGL24_00986224-292
Clostridium subterminale, CB-LS10-1 AnGL53_01665234-302
Priestia megaterium, 10L1 PaGL#57_02868224-292
Variovorax paradoxus, SPNA7 PaGL#43_01356228-302
Methanospirillum lacunae, Ki8-1 MLKi8_01369216-277
Geodermatophilus sp., RDM14 PaGL#36_03863229-303
Methylorubrum populi, CTY4 PaGL#39_04778214-282
Fictibacillus phosphorivorans, TY7 PaGL#38_03451224-292
Methanospirillum hungatei, GP1 MhGP1_01598216-278
Methanospirillum stamsii, Pt1 MLKi8_01972216-278
Syntrophomonas wolfei, saponavida Swsap_00324225-293
Bacillus subtilis, 30VD-1 PaGL#66_01527226-294
Peribacillus frigoritolerans, 30N-5 PaGL#67_01962225-292
Micromonospora inositola, Utrum1 PaGL#61_06542224-297
Sphingomonas sp., CR2A3 PaGL#62_02704222-274
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00667224-293
Niallia taxi, AG-1 PaGL#37_02878224-292
Methanospirillum.hungatei GP1, MhGP1 8064047960:MhGP1_01304216-278
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_1194:Mhun_00094216-278
MPOB, Sfum 639703974:Sfum_03285213-282
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11648:Spalm_02210652-721
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11714:Swol_00699226-293
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_13840:Szehn_02152222-275
Syntrophus aciditrophicus, SB 637858882:SYN_00538221-290
Syntrophus gentianae, DSM8423 Sgen_03034237-306
Ruminococcus callidus, ATCC 27760 Rcal_01913220-287
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