SMPP Home

PaGL#33_02235 Locus tags: • Sequence Length: 399

Variovorax sp., EBFNA2 Batch2_genome_fasta/V.boronicumulans

5050100100150150200200250250300300350350400400
Show complete sequence
Click domain (colored bar) to show sequence
PaGL#33_02230 PaGL#33_02235 PaGL#33_02238 PaGL#33_02239 PaGL#33_02240 
    [PF08007]_[PF20514]

    [103:PF08007]_[274:PF20514]

    [99:IPR003347]_[103:IPR003347]_[274:IPR046799]

Looking for similar signatures in the working genomes

PF08007:JmjC_2. JmjC domain

Found 8 similar signatures
FD_25_22, AnGL7 AnGL7_0078293-209
FD-25-21, AnGL21 AnGL21_0181893-209
Variovorax sp., EBFNA2 PaGL#33_02235103-217
Variovorax paradoxus, 2u118 PaGL#32_03536103-217
Dietzia cinnamea, 55 PaGL#56_00423125-231
Variovorax paradoxus, SPNA7 PaGL#43_03575103-217
Geodermatophilus sp., RDM14 PaGL#36_0192461-168
Micromonospora inositola, Utrum1 PaGL#61_02814149-256

PF20514:ROXA-like_wH. ROXA-like winged helix

Found 5 similar signatures
FD_25_22, AnGL7 AnGL7_00782259-373
FD-25-21, AnGL21 AnGL21_01818259-373
Variovorax sp., EBFNA2 PaGL#33_02235274-378
Variovorax paradoxus, 2u118 PaGL#32_03536274-378
Variovorax paradoxus, SPNA7 PaGL#43_03575274-377
Search by locus tag: Search
↑ Top




v4.1 @copyright 2025 UCLA