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PaGL#33_02673 Locus tags: • Sequence Length: 341

Variovorax sp., EBFNA2 Batch2_genome_fasta/V.boronicumulans

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PaGL#33_02670 PaGL#33_02671 PaGL#33_02672 PaGL#33_02673 PaGL#33_02674 
    [PF01171]_[PF09179]

    [19:PF01171]_[246:PF09179]

    [17:IPR012795]_[19:IPR011063]_[246:IPR015262]

Looking for similar signatures in the working genomes

PF01171:ATP_bind_3. PP-loop family

Found 107 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_014522658.1:LOMAGDGF_029327-176
WP_003513536.1:LOMAGDGF_0301519-199
Clostridium acetobutylicum, DSM 1731 WP_010966480.1:FHOCHPCF_0325420-200
Acetivibrio alkalicellulosi, DSM 17461 2510061135:NJMEOJLD_0136719-199
2510062926:NJMEOJLD_0311243-220
Pseudobacteroides cellulosolvens, DSM 2933 WP_242853046.1:NEIHKHHH_0396324-204
WP_050753723.1:NEIHKHHH_0459626-195
Ruminococcus albus_7, DSM 20455 HCIAFFOI_0093142-208
WP_013497963.1:HCIAFFOI_0132038-204
WP_013498312.1:HCIAFFOI_0170724-197
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11108:GJLLLGJL_0010519-198
Ga0065332_111053:GJLLLGJL_0103728-190
Paenibacillus guangzhouensis, KCTC 33171 WP_227793314.1:KDFAKKPF_0484028-212
Clostridium acetobutylicum, ATCC 824 WP_010966480.1:OJAMHIDJ_0326320-200
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697314.1:PROKKA_0012520-200
WP_171003626.1:PROKKA_036766-188
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0073628-196
OINOEOOJ_0211320-200
FD_25_22, AnGL7 AnGL7_0167439-202
AnGL7_0303128-207
FD_25_27, AnGL8 AnGL8_0180521-206
AnGL8_0215140-204
FD_MS_7_1, AnGL28 AnGL28_0047322-198
AnGL28_0159227-185
FD_SO4_25_1_F22, AnGL30 AnGL30_0020933-193
AnGL30_0209624-201
FD_SO4_37_1, AnGL2 AnGL2_0072127-185
AnGL2_0315222-198
FD_YE_25_21, AnGL21 AnGL21_0072919-199
AnGL21_0158040-203
FD_YE_37_3, AnGL26 AnGL26_0408820-197
FD_YE_37_8_2, AnGL3 AnGL3_0046724-201
FD_YE_37_9_2, AnGL4 AnGL4_0095124-210
AnGL4_0217638-204
Syntrophus buswellii, Sbus Sbus_0160219-204
Sbus_0217711-176
Syntrophomonas curvata, Scurva Scurva_0018520-200
Scurva_0158628-194
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0027628-196
Sespor_0145920-200
Syntrophomonas wolfei methylbutyratica, Swm Swm_0010519-200
Swm_0115528-190
Terrisporobacter hibernicus, AnGL54 AnGL54_0437954-218
AnGL54_0309020-201
AnGL54_0313222-200
FD-25-21, AnGL21 AnGL21_0090839-202
AnGL21_0319828-207
Sunxiuqinia elliptica, AnGL22 AnGL22_0408420-197
Paraclostridium benzoelyticum, AnGL27 AnGL27_0051020-201
AnGL27_0053922-172
AnGL27_0141054-218
FD-MS-7-8, AnGL9 AnGL9_0033222-199
AnGL9_0230736-196
FD-YE-37-9-3, AnGL29 AnGL29_0167624-210
AnGL29_0290138-204
Methylobacterium radiotolerans, GTSA1 PaGL#34_047781-180
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0012421-197
Syntrophomonas erecta, GB-438 Ga0610585_0073628-196
Ga0610585_0211320-200
Variovorax sp., EBFNA2 PaGL#33_0089850-214
PaGL#33_0267319-199
Variovorax paradoxus, 2u118 PaGL#32_0091352-216
PaGL#32_0318119-199
Dietzia cinnamea, 55 PaGL#56_0055432-200
Maridesulfovibrio salexigens, AnGL23 AnGL23_0063033-211
AnGL23_0133438-219
AnGL23_0212948-171
Exiguobacterium mexicanum, AnGL24 AnGL24_030202-175
Clostridium subterminale, CB-LS10-1 AnGL53_0341832-214
AnGL53_0353654-218
Priestia megaterium, 10L1 PaGL#57_0217420-204
Variovorax paradoxus, SPNA7 PaGL#43_0090452-216
PaGL#43_0323419-199
Methanospirillum lacunae, Ki8-1 MLKi8_0040151-212
Geodermatophilus sp., RDM14 PaGL#36_0063525-197
Methylorubrum populi, CTY4 PaGL#39_0477126-203
Fictibacillus phosphorivorans, TY7 PaGL#38_0045619-204
Methanospirillum hungatei, GP1 MhGP1_0062452-213
Methanospirillum stamsii, Pt1 MLKi8_0086653-215
Syntrophomonas wolfei, saponavida Swsap_0127819-200
Swsap_0293228-192
Swsap_0326954-218
Bacillus subtilis, 30VD-1 PaGL#66_0011519-202
Peribacillus frigoritolerans, 30N-5 PaGL#67_0019620-206
Micromonospora inositola, Utrum1 PaGL#61_0681527-207
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0120854-218
AnGL54_0389320-201
AnGL54_0393522-200
Niallia taxi, AG-1 PaGL#37_0007820-205
Methanospirillum.hungatei GP1, MhGP1 8064048955:MhGP1_0227852-213
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_113200:Mhun_0319752-213
MPOB, Sfum 639701478:Sfum_0074459-232
639702034:Sfum_0131023-205
639702380:Sfum_0166227-190
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_0182324-107
Ga0128340_10965:Spalm_0148620-199
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11108:Swol_0010519-198
Ga0065332_111053:Swol_0103728-190
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_1259:Szehn_0119128-195
Ga0124040_10548:Szehn_0046020-200
Syntrophus aciditrophicus, SB 637859859:SYN_0145020-203
637860068:SYN_0165231-206
Syntrophus gentianae, DSM8423 Sgen_0231932-200
Ga0074853_11029:Sgen_0157119-202
Mucilaginibacter gossypii, cycad 4 PaGL#42_0443521-198
Ruminococcus callidus, ATCC 27760 Rcal_02067140-306
Rcal_0272725-202

PF09179:TilS. TilS substrate binding domain

Found 18 similar signatures
FD_25_22, AnGL7 AnGL7_03031257-325
FD_25_27, AnGL8 AnGL8_01805261-339
FD_YE_25_21, AnGL21 AnGL21_00729247-314
Syntrophus buswellii, Sbus Sbus_01602258-326
FD-25-21, AnGL21 AnGL21_03198257-325
Variovorax sp., EBFNA2 PaGL#33_02673246-312
Variovorax paradoxus, 2u118 PaGL#32_03181246-303
Dietzia cinnamea, 55 PaGL#56_00554246-301
Variovorax paradoxus, SPNA7 PaGL#43_03234246-303
Geodermatophilus sp., RDM14 PaGL#36_00635247-311
Bacillus subtilis, 30VD-1 PaGL#66_00115257-323
Peribacillus frigoritolerans, 30N-5 PaGL#67_00196259-324
Micromonospora inositola, Utrum1 PaGL#61_06815256-324
Niallia taxi, AG-1 PaGL#37_00078258-324
MPOB, Sfum 639702034:Sfum_01310259-326
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10965:Spalm_01486252-320
Syntrophus aciditrophicus, SB 637859859:SYN_01450259-326
Syntrophus gentianae, DSM8423 Ga0074853_11029:Sgen_01571258-326
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