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PaGL#33_03452 Locus tags: • Sequence Length: 615

Variovorax sp., EBFNA2 Batch2_genome_fasta/V.boronicumulans

5050100100150150200200250250300300350350400400450450500500550550600600650650
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PaGL#33_03447 PaGL#33_03449 PaGL#33_03450 PaGL#33_03451 PaGL#33_03452 PaGL#33_03453 PaGL#33_03454 PaGL#33_03455 
    [PF00999]_[PF02254]_[TM]

    [15:PF00999]_[407:PF02254]_[TM]

    [15:IPR006153]_[406:IPR003148]_[406:IPR036291]_[407:IPR003148]_[TM]

Looking for similar signatures in the working genomes

PF00999:Na_H_Exchanger. Sodium/hydrogen exchanger, transmembrane

Found 236 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003520848.1:LOMAGDGF_003607-372
WP_003518072.1:LOMAGDGF_021096-381
Clostridium acetobutylicum, DSM 1731 WP_010963766.1:FHOCHPCF_004899-378
Acetivibrio alkalicellulosi, DSM 17461 2510061884:NJMEOJLD_020936-384
2510062051:NJMEOJLD_022598-371
Pseudobacteroides cellulosolvens, DSM 2933 WP_036938583.1:NEIHKHHH_0366611-376
Ruminococcus albus_7, DSM 20455 WP_013498023.1:HCIAFFOI_013815-386
WP_013499612.1:HCIAFFOI_0312711-384
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_111237:GJLLLGJL_012121-364
Ga0065332_111695:GJLLLGJL_016646-379
Paenibacillus guangzhouensis, KCTC 33171 WP_152391729.1:KDFAKKPF_001327-371
KDFAKKPF_029945-128
WP_152394370.1:KDFAKKPF_0316611-377
WP_152394863.1:KDFAKKPF_0373311-378
WP_193726625.1:KDFAKKPF_051709-419
WP_152396861.1:KDFAKKPF_0612513-401
Clostridium acetobutylicum, ATCC 824 WP_010963766.1:OJAMHIDJ_004899-378
Ruminiclostridium herbifermentans MA18, DSM 109966 PROKKA_004676-204
PROKKA_004667-198
FD_25_22, AnGL7 AnGL7_0067710-417
AnGL7_0076210-387
AnGL7_009404-355
AnGL7_011757-387
AnGL7_0195211-370
AnGL7_024367-377
AnGL7_0279412-403
AnGL7_028289-389
AnGL7_030276-372
AnGL7_031349-392
FD_25_27, AnGL8 AnGL8_005159-384
AnGL8_0059113-410
AnGL8_018285-383
AnGL8_009778-389
FD_MS_7_1, AnGL28 AnGL28_0003020-396
AnGL28_0022786-476
AnGL28_0120623-388
AnGL28_014868-391
AnGL28_0149510-402
AnGL28_0327413-386
FD_SO4_25_1_F22, AnGL30 AnGL30_0073511-423
AnGL30_0099619-389
AnGL30_0212213-377
FD_SO4_37_1, AnGL2 AnGL2_0033623-388
AnGL2_006158-391
AnGL2_0062410-402
AnGL2_0240413-386
AnGL2_0270920-396
AnGL2_0290686-476
FD_YE_25_21, AnGL21 AnGL21_0377113-358
AnGL21_0402314-370
AnGL21_040988-391
AnGL21_007962-348
AnGL21_0112611-419
AnGL21_016959-384
AnGL21_0288711-371
FD_YE_37_3, AnGL26 AnGL26_0085414-389
AnGL26_026888-373
AnGL26_0424010-381
FD_YE_37_8_2, AnGL3 AnGL3_0006810-389
AnGL3_0113421-396
AnGL3_029279-373
FD_YE_37_9_2, AnGL4 AnGL4_013849-383
AnGL4_014089-383
AnGL4_0247811-382
AnGL4_027379-377
AnGL4_027717-380
Syntrophus buswellii, Sbus Sbus_000648-369
Sbus_003572-255
Sbus_0038113-386
Sbus_0038235-399
Sbus_0082711-384
Sbus_0128611-121
Sbus_012872-268
Syntrophomonas curvata, Scurva Scurva_019437-370
Scurva_025728-380
Syntrophomonas wolfei methylbutyratica, Swm Swm_013691-363
Swm_018656-379
Terrisporobacter hibernicus, AnGL54 AnGL54_0052716-371
AnGL54_012246-376
AnGL54_013790-358
AnGL54_0171020-403
AnGL54_022467-380
AnGL54_0227617-403
AnGL54_0243014-403
AnGL54_0285816-404
FD-25-21, AnGL21 AnGL21_002327-377
AnGL21_0055411-370
AnGL21_013957-387
AnGL21_016214-355
AnGL21_0183610-387
AnGL21_0192210-416
AnGL21_031039-392
AnGL21_032026-372
AnGL21_033949-389
Sunxiuqinia elliptica, AnGL22 AnGL22_0085514-389
AnGL22_026858-373
AnGL22_0423610-381
Paraclostridium benzoelyticum, AnGL27 AnGL27_012981-111
AnGL27_0241814-401
AnGL27_0297037-422
FD-MS-7-8, AnGL9 AnGL9_0047384-474
AnGL9_0068219-395
AnGL9_013918-392
AnGL9_0140011-401
AnGL9_0148024-385
FD-YE-37-9-3, AnGL29 AnGL29_000297-380
AnGL29_021099-383
AnGL29_021339-383
AnGL29_0320311-382
AnGL29_034629-377
Methylobacterium radiotolerans, GTSA1 PaGL#34_0628510-410
PaGL#34_0642816-381
PaGL#34_0053715-393
PaGL#34_0104410-396
PaGL#34_0131310-403
PaGL#34_0218013-386
PaGL#34_0233311-405
PaGL#34_0428214-381
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0143210-406
PaGL#35_021718-378
PaGL#35_034238-407
Variovorax sp., EBFNA2 PaGL#33_0054326-396
PaGL#33_0345215-380
PaGL#33_0383513-387
PaGL#33_0417010-396
PaGL#33_0510513-378
PaGL#33_060596-377
Variovorax paradoxus, 2u118 PaGL#32_0052830-397
PaGL#32_0208813-388
PaGL#32_0367110-401
PaGL#32_0444012-378
PaGL#32_052787-377
Dietzia cinnamea, 55 PaGL#56_0105534-411
Maridesulfovibrio salexigens, AnGL23 AnGL23_004437-371
AnGL23_0240410-368
AnGL23_0240510-368
Exiguobacterium mexicanum, AnGL24 AnGL24_0168411-363
AnGL24_026543-392
AnGL24_0276714-393
Clostridium subterminale, CB-LS10-1 AnGL53_006718-379
AnGL53_006859-362
AnGL53_007176-381
AnGL53_026395-383
Priestia megaterium, 10L1 PaGL#57_023209-390
PaGL#57_0283411-378
PaGL#57_038446-387
PaGL#57_046225-412
PaGL#57_0544010-381
PaGL#57_0669810-390
Variovorax paradoxus, SPNA7 PaGL#43_0050530-397
PaGL#43_0219813-388
PaGL#43_0371110-401
PaGL#43_0460612-378
PaGL#43_054947-377
Methanospirillum lacunae, Ki8-1 MLKi8_0063513-413
MLKi8_0109513-379
MLKi8_0113412-375
Geodermatophilus sp., RDM14 PaGL#36_0025213-423
PaGL#36_0195213-386
PaGL#36_030746-402
Methylorubrum populi, CTY4 PaGL#39_007599-411
PaGL#39_0229514-382
PaGL#39_0279811-392
PaGL#39_0456026-397
Fictibacillus phosphorivorans, TY7 PaGL#38_0122310-395
PaGL#38_0177812-391
PaGL#38_0204810-389
Methanospirillum hungatei, GP1 MhGP1_0080213-380
MhGP1_0139611-375
MhGP1_0247413-412
MhGP1_0267915-381
Methanospirillum stamsii, Pt1 MLKi8_0066213-378
MLKi8_0169311-375
MLKi8_0290012-412
MLKi8_0338115-379
Syntrophomonas wolfei, saponavida Swsap_006458-374
Bacillus subtilis, 30VD-1 PaGL#66_009645-414
PaGL#66_030009-388
PaGL#66_0318211-377
Peribacillus frigoritolerans, 30N-5 PaGL#67_000455-412
PaGL#67_048189-430
PaGL#67_0505512-377
PaGL#67_053393-379
Micromonospora inositola, Utrum1 PaGL#61_0035812-373
PaGL#61_023117-403
PaGL#61_023359-403
PaGL#61_041572-399
PaGL#61_0531613-384
Sphingomonas sp., CR2A3 PaGL#62_0006217-379
PaGL#62_003408-396
PaGL#62_0102412-385
PaGL#62_0183243-428
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_019526-376
AnGL54_021060-358
AnGL54_0251420-403
AnGL54_030497-380
AnGL54_0307917-403
AnGL54_0323414-403
AnGL54_0366116-404
Niallia taxi, AG-1 PaGL#37_054420-217
PaGL#37_054438-94
PaGL#37_0558711-398
PaGL#37_0026611-378
PaGL#37_0093111-389
PaGL#37_036596-411
Methanospirillum.hungatei GP1, MhGP1 8064046851:MhGP1_0022415-381
8064047063:MhGP1_0042913-412
8064048168:MhGP1_0150711-375
8064048774:MhGP1_0210013-380
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11353:Mhun_0035111-376
Ga0065338_111574:Mhun_0157512-412
Ga0065338_111742:Mhun_0174315-381
MPOB, Sfum 639702228:Sfum_0150821-398
639702295:Sfum_015774-380
639703038:Sfum_0233313-377
639703199:Sfum_0250112-368
639704711:Sfum_040326-372
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_0253513-392
Ga0128340_11478:Spalm_020779-375
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_111237:Swol_012121-364
Ga0065332_111695:Swol_016646-379
Syntrophomonas zehnderi, OL-4 Szehn Szehn_0075710-375
Ga0124040_11380:Szehn_009274-377
Syntrophus aciditrophicus, SB 637861146:SYN_0262714-386
637861149:SYN_026287-371
637861416:SYN_028780-95
637861417:SYN_0287910-265
Syntrophus gentianae, DSM8423 Ga0074853_1306:Sgen_0283610-367
Ga0074853_14412:Sgen_0321510-388
Ga0074853_12145:Sgen_0248510-384
Ga0074853_102162:Sgen_003706-371
Mucilaginibacter gossypii, cycad 4 PaGL#42_012508-404
PaGL#42_013069-406
PaGL#42_0455426-393
Ruminococcus callidus, ATCC 27760 Rcal_0053018-410
Rcal_010037-382

PF02254:TrkA_N. TrkA-N domain

Found 226 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003511746.1:LOMAGDGF_007682-123
231-341
Acetivibrio alkalicellulosi, DSM 17461 2510062301:NJMEOJLD_025012-118
2510062302:NJMEOJLD_025022-116
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946308.1:NEIHKHHH_003802-116
WP_036946310.1:NEIHKHHH_003812-118
WP_036938574.1:NEIHKHHH_036632-118
WP_036938577.1:NEIHKHHH_036642-110
Ruminococcus albus_7, DSM 20455 WP_013483682.1:HCIAFFOI_038113-119
WP_013497346.1:HCIAFFOI_006284-119
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11951:GJLLLGJL_009353-123
230-346
Ga0065332_111237:GJLLLGJL_01212402-518
Paenibacillus guangzhouensis, KCTC 33171 WP_193727013.1:KDFAKKPF_060285-121
WP_152396860.1:KDFAKKPF_061245-121
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696418.1:PROKKA_015892-116
WP_137696417.1:PROKKA_015902-118
Syntrophomonas erecta, DSM 16215 OINOEOOJ_009333-123
230-347
OINOEOOJ_009796-122
FD_25_22, AnGL7 AnGL7_000952-125
234-350
AnGL7_00940390-508
AnGL7_01952414-524
AnGL7_02436403-516
AnGL7_03027404-517
AnGL7_03134421-536
FD_25_27, AnGL8 AnGL8_012552-125
234-350
AnGL8_01828397-483
AnGL8_00977420-535
FD_MS_7_1, AnGL28 AnGL28_024752-122
232-349
FD_SO4_25_1_F22, AnGL30 AnGL30_005512-123
231-347
FD_SO4_37_1, AnGL2 AnGL2_016042-122
232-349
FD_YE_25_21, AnGL21 AnGL21_036357-123
AnGL21_03771397-514
AnGL21_04098419-533
AnGL21_00796387-504
AnGL21_01695412-525
AnGL21_02887400-510
AnGL21_031112-108
234-350
FD_YE_37_3, AnGL26 AnGL26_006952-123
230-345
AnGL26_02331114-231
AnGL26_02688433-525
FD_YE_37_8_2, AnGL3 AnGL3_012422-123
232-347
AnGL3_02927433-525
FD_YE_37_9_2, AnGL4 AnGL4_024086-122
Syntrophus buswellii, Sbus Sbus_00382432-548
Sbus_00821149-262
374-486
Sbus_00827414-527
Sbus_024042-118
Syntrophomonas curvata, Scurva Scurva_01943411-524
Scurva_020555-121
Scurva_030002-123
229-348
Syntrophomonas erecta sporosyntropha, Sespor Sespor_000266-122
Sespor_000723-123
230-347
Syntrophomonas wolfei methylbutyratica, Swm Swm_010273-123
230-346
Swm_01369402-518
Swm_020515-121
Terrisporobacter hibernicus, AnGL54 AnGL54_028943-119
FD-25-21, AnGL21 AnGL21_00232403-516
AnGL21_00554414-524
AnGL21_01621390-508
AnGL21_025252-125
234-350
AnGL21_03103421-536
AnGL21_03202404-517
Sunxiuqinia elliptica, AnGL22 AnGL22_006962-123
230-345
AnGL22_02328114-231
AnGL22_02685433-525
Paraclostridium benzoelyticum, AnGL27 AnGL27_034643-119
FD-MS-7-8, AnGL9 AnGL9_01423116-232
AnGL9_015082-122
232-349
FD-YE-37-9-3, AnGL29 AnGL29_031336-122
Methylobacterium radiotolerans, GTSA1 PaGL#34_06428408-520
PaGL#34_02180420-534
PaGL#34_02333445-558
PaGL#34_04282415-528
Syntrophomonas erecta, GB-438 Ga0610585_009333-123
230-347
Ga0610585_009796-122
Variovorax sp., EBFNA2 PaGL#33_03452407-521
PaGL#33_03835428-534
PaGL#33_05105408-520
PaGL#33_06059415-529
Variovorax paradoxus, 2u118 PaGL#32_02088429-542
PaGL#32_04440408-521
PaGL#32_05278415-529
Dietzia cinnamea, 55 PaGL#56_003441-114
PaGL#56_00985153-270
PaGL#56_017152-116
PaGL#56_0171634-150
PaGL#56_0304910-126
Maridesulfovibrio salexigens, AnGL23 AnGL23_00443404-520
AnGL23_013262-124
234-351
AnGL23_01361112-227
AnGL23_01464125-241
AnGL23_02306108-226
AnGL23_024439-123
AnGL23_03359113-244
Exiguobacterium mexicanum, AnGL24 AnGL24_011348-124
AnGL24_02726119-242
Clostridium subterminale, CB-LS10-1 AnGL53_008995-121
AnGL53_0097644-102
AnGL53_009772-116
AnGL53_009783-117
Priestia megaterium, 10L1 PaGL#57_02320401-484
PaGL#57_010914-122
PaGL#57_02619115-238
PaGL#57_036374-120
PaGL#57_061094-120
PaGL#57_06698408-516
Variovorax paradoxus, SPNA7 PaGL#43_0133510-126
PaGL#43_02198429-542
PaGL#43_04606408-521
PaGL#43_05494415-529
Methanospirillum lacunae, Ki8-1 MLKi8_01134412-526
MLKi8_0241714-128
MLKi8_02702128-244
369-475
Geodermatophilus sp., RDM14 PaGL#36_01157142-260
PaGL#36_01339159-281
325-435
PaGL#36_028882-116
PaGL#36_028892-118
Methylorubrum populi, CTY4 PaGL#39_02295413-519
PaGL#39_02798433-545
PaGL#39_04560435-549
Fictibacillus phosphorivorans, TY7 PaGL#38_0118012-128
PaGL#38_02048406-516
PaGL#38_021114-120
PaGL#38_03623117-239
PaGL#38_03827114-236
Methanospirillum hungatei, GP1 MhGP1_00802425-539
MhGP1_01396411-525
MhGP1_0239814-128
MhGP1_024302-118
MhGP1_024314-122
Methanospirillum stamsii, Pt1 MLKi8_00662423-537
MLKi8_01693411-525
MLKi8_032314-122
MLKi8_032323-118
MLKi8_0328214-128
Syntrophomonas wolfei, saponavida Swsap_00645412-525
Swsap_017512-123
230-348
Swsap_029515-121
Bacillus subtilis, 30VD-1 PaGL#66_01179116-237
PaGL#66_012068-124
PaGL#66_026824-120
PaGL#66_03000405-514
Peribacillus frigoritolerans, 30N-5 PaGL#67_00758136-258
PaGL#67_010016-122
PaGL#67_041504-120
PaGL#67_05016117-249
PaGL#67_053405-121
Micromonospora inositola, Utrum1 PaGL#61_00831123-242
PaGL#61_018862-118
PaGL#61_018872-116
PaGL#61_0649510-126
PaGL#61_0670626-147
357-466
Sphingomonas sp., CR2A3 PaGL#62_00062407-520
PaGL#62_01024416-529
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_036973-119
Niallia taxi, AG-1 PaGL#37_003044-120
PaGL#37_00931404-515
PaGL#37_012664-120
PaGL#37_01811116-243
PaGL#37_03209115-237
Methanospirillum.hungatei GP1, MhGP1 8064047106:MhGP1_004724-122
8064047107:MhGP1_004732-118
8064047145:MhGP1_0050514-128
8064048168:MhGP1_01507411-525
8064048774:MhGP1_02100425-539
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_11353:Mhun_00351411-525
Ga0065338_111505:Mhun_0150614-128
Ga0065338_111529:Mhun_015302-118
Ga0065338_111530:Mhun_015314-122
Ga0065338_113051:Mhun_03050125-241
366-472
MPOB, Sfum 639701662:Sfum_00933133-246
355-470
639701809:Sfum_01085115-231
639703038:Sfum_02333411-522
639703199:Sfum_02501411-539
639704682:Sfum_04001129-247
639704711:Sfum_04032405-521
Syntrophomonas palmitatica, JCM14374 Spalm Spalm_02446114-234
Ga0128340_11478:Spalm_02077412-525
Ga0128340_102221:Spalm_005012-123
230-348
Ga0128340_102245:Spalm_005255-114
Spalm_00528109-225
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11951:Swol_009353-123
230-346
Ga0065332_111237:Swol_01212402-518
Syntrophomonas zehnderi, OL-4 Szehn Szehn_00757413-529
Ga0124040_10426:Szehn_001363-123
230-348
Syntrophus aciditrophicus, SB 637860189:SYN_017625-121
637860796:SYN_02320166-278
390-501
637861149:SYN_02628404-520
637861176:SYN_026522-103
232-349
637861416:SYN_02878125-238
Syntrophus gentianae, DSM8423 Ga0074853_12145:Sgen_02485414-527
Sgen_00504108-224
Ga0074853_102162:Sgen_00370404-520
Ruminococcus callidus, ATCC 27760 Rcal_004662-122
230-347
Rcal_0243210-123
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