SMPP Home

PaGL#33_03935 Locus tags: • Sequence Length: 574

Variovorax sp., EBFNA2 Batch2_genome_fasta/V.boronicumulans

5050100100150150200200250250300300350350400400450450500500550550600600
Show complete sequence
Click domain (colored bar) to show sequence
PaGL#33_03930 PaGL#33_03931 PaGL#33_03934 PaGL#33_03935 
    [SP]_[PF08479]_[PF03865]_[TM]

    [SP]_[55:PF08479]_[190:PF03865]_[TM]

    [SP]_[55:IPR013686]_[190:IPR005565]_[TM]

Looking for similar signatures in the working genomes

PF08479:POTRA_2. POTRA domain, ShlB-type

Found 11 similar signatures
FD_25_27, AnGL8 AnGL8_0199569-129
Syntrophus buswellii, Sbus Sbus_0212272-147
Variovorax sp., EBFNA2 PaGL#33_0055361-137
PaGL#33_0393555-128
Variovorax paradoxus, 2u118 PaGL#32_0054075-151
PaGL#32_0226598-149
Variovorax paradoxus, SPNA7 PaGL#43_0600845-118
PaGL#43_0051775-151
Sphingomonas sp., CR2A3 PaGL#62_0050074-151
PaGL#62_0281493-155
Syntrophus gentianae, DSM8423 Sgen_0254373-147

PF03865:ShlB. Haemolysin secretion/activation protein ShlB/FhaC/HecB

Found 11 similar signatures
FD_25_27, AnGL8 AnGL8_0199680-346
Syntrophus buswellii, Sbus Sbus_02122208-532
Variovorax sp., EBFNA2 PaGL#33_00553200-513
PaGL#33_03935190-508
Variovorax paradoxus, 2u118 PaGL#32_00540214-528
PaGL#32_02265217-543
Variovorax paradoxus, SPNA7 PaGL#43_06008180-498
PaGL#43_00517214-528
Sphingomonas sp., CR2A3 PaGL#62_00500223-529
PaGL#62_02814217-517
Syntrophus gentianae, DSM8423 Sgen_02543208-532
Search by locus tag: Search
↑ Top




v4.1 @copyright 2025 UCLA