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PaGL#33_04270 Locus tags: • Sequence Length: 416

Variovorax sp., EBFNA2 Batch2_genome_fasta/V.boronicumulans

5050100100150150200200250250300300350350400400450450
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PaGL#33_04265 PaGL#33_04267 PaGL#33_04269 PaGL#33_04270 PaGL#33_04273 PaGL#33_04274 PaGL#33_04275 
    [PF02492]_[PF07683]

    [5:PF02492]_[256:PF07683]

    [2:IPR027417]_[5:IPR003495]_[256:IPR011629]_[256:IPR011629]

Looking for similar signatures in the working genomes

PF02492:cobW. CobW/HypB/UreG, nucleotide-binding domain

Found 156 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003516913.1:LOMAGDGF_0058834-194
WP_003515812.1:LOMAGDGF_025585-176
Acetivibrio alkalicellulosi, DSM 17461 2510063429:NJMEOJLD_036082-164
2510063461:NJMEOJLD_036405-180
2510063462:NJMEOJLD_036416-171
2510063489:NJMEOJLD_036687-186
Pseudobacteroides cellulosolvens, DSM 2933 WP_036943892.1:NEIHKHHH_006195-179
WP_036943890.1:NEIHKHHH_006206-175
WP_036943381.1:NEIHKHHH_051385-176
WP_036944911.1:NEIHKHHH_0557130-191
Ruminococcus albus_7, DSM 20455 WP_013497780.1:HCIAFFOI_011197-202
WP_013499479.1:HCIAFFOI_029923-178
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11444:GJLLLGJL_004313-177
GJLLLGJL_017583-164
GJLLLGJL_021942-164
Paenibacillus guangzhouensis, KCTC 33171 KDFAKKPF_029023-123
KDFAKKPF_029036-76
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698909.1:PROKKA_0362130-192
FD_25_22, AnGL7 AnGL7_0125669-230
AnGL7_030618-179
AnGL7_036416-154
FD_25_27, AnGL8 AnGL8_019003-165
FD_MS_7_1, AnGL28 AnGL28_0012749-220
AnGL28_0108129-235
AnGL28_013692-176
AnGL28_0271010-185
FD_SO4_37_1, AnGL2 AnGL2_0021129-235
AnGL2_004982-176
AnGL2_0183910-185
AnGL2_0280649-220
FD_YE_25_21, AnGL21 AnGL21_0379135-196
AnGL21_043455-174
AnGL21_00193187-348
AnGL21_011923-161
FD_YE_37_3, AnGL26 AnGL26_007312-163
AnGL26_038525-182
AnGL26_039684-179
FD_YE_37_9_2, AnGL4 AnGL4_018023-175
AnGL4_027263-163
Syntrophus buswellii, Sbus Sbus_00820235-298
Sbus_0189744-206
Syntrophomonas curvata, Scurva Scurva_011972-164
Scurva_0184831-190
Scurva_02703232-296
Syntrophomonas wolfei methylbutyratica, Swm Swm_0122631-192
Swm_019873-164
Swm_026062-164
Swm_02692232-296
Terrisporobacter hibernicus, AnGL54 AnGL54_0108335-196
AnGL54_011886-178
AnGL54_0126432-193
FD-25-21, AnGL21 AnGL21_0066911-185
AnGL21_0130869-230
AnGL21_031688-179
Sunxiuqinia elliptica, AnGL22 AnGL22_007322-163
AnGL22_038485-182
AnGL22_039644-179
Paraclostridium benzoelyticum, AnGL27 AnGL27_0104035-196
AnGL27_028115-177
FD-MS-7-8, AnGL9 AnGL9_0034610-191
AnGL9_010236-166
AnGL9_010433-163
FD-YE-37-9-3, AnGL29 AnGL29_025273-175
AnGL29_034513-163
Methylobacterium radiotolerans, GTSA1 PaGL#34_0667111-183
PaGL#34_010358-214
PaGL#34_0263817-197
PaGL#34_031219-179
PaGL#34_034357-212
PaGL#34_0401120-196
PaGL#34_0513812-187
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_054505-211
Variovorax sp., EBFNA2 PaGL#33_008254-184
PaGL#33_0126319-189
PaGL#33_038309-218
PaGL#33_042705-210
Variovorax paradoxus, 2u118 PaGL#32_0565780-253
PaGL#32_008444-184
PaGL#32_025964-185
PaGL#32_037435-210
PaGL#32_039488-180
PaGL#32_0433119-189
Dietzia cinnamea, 55 PaGL#56_0077731-206
PaGL#56_026039-182
Maridesulfovibrio salexigens, AnGL23 AnGL23_0262532-191
AnGL23_02889307-477
Exiguobacterium mexicanum, AnGL24 AnGL24_014542-175
AnGL24_016674-209
Clostridium subterminale, CB-LS10-1 AnGL53_008157-181
AnGL53_0203335-196
AnGL53_0233635-196
AnGL53_023575-179
Priestia megaterium, 10L1 PaGL#57_026774-210
PaGL#57_044935-176
PaGL#57_054674-180
Variovorax paradoxus, SPNA7 PaGL#43_0564780-253
PaGL#43_008354-184
PaGL#43_028504-185
PaGL#43_037875-210
PaGL#43_039918-180
PaGL#43_0449519-189
Methanospirillum lacunae, Ki8-1 MLKi8_000973-164
MLKi8_001083-164
MLKi8_003863-164
MLKi8_0093636-196
MLKi8_028063-163
Geodermatophilus sp., RDM14 PaGL#36_0158324-193
Methylorubrum populi, CTY4 PaGL#39_0103219-190
PaGL#39_0105413-193
PaGL#39_012917-211
PaGL#39_0157714-191
PaGL#39_024168-214
PaGL#39_027229-179
PaGL#39_045036-180
Fictibacillus phosphorivorans, TY7 PaGL#38_017665-184
Methanospirillum hungatei, GP1 MhGP1_0086634-198
MhGP1_0092736-196
MhGP1_012193-163
Methanospirillum stamsii, Pt1 MLKi8_001723-164
MLKi8_001803-160
MLKi8_0118037-196
MLKi8_013653-163
Syntrophomonas wolfei, saponavida Swsap_0165535-196
Swsap_0269431-193
Bacillus subtilis, 30VD-1 PaGL#66_038584-210
Peribacillus frigoritolerans, 30N-5 PaGL#67_007946-211
PaGL#67_026775-181
PaGL#67_035839-188
PaGL#67_045186-177
Micromonospora inositola, Utrum1 PaGL#61_025864-175
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0181135-196
AnGL54_019166-178
AnGL54_0199232-193
Niallia taxi, AG-1 PaGL#37_044344-210
PaGL#37_011466-209
PaGL#37_022364-189
PaGL#37_023955-181
Methanospirillum.hungatei GP1, MhGP1 8064048349:MhGP1_016833-163
8064048648:MhGP1_0197536-196
8064048709:MhGP1_0203634-198
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_1116:Mhun_0001636-196
Ga0065338_11550:Mhun_005493-163
MPOB, Sfum 639702979:Sfum_0227532-190
639703498:Sfum_028025-175
639704383:Sfum_03698311-483
639704783:Sfum_0410633-195
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11444:Swol_004313-177
Swol_017583-164
Swol_021942-164
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_12520:Szehn_012023-164
Ga0124040_11350:Szehn_0089731-193
Syntrophus aciditrophicus, SB 637860709:SYN_0224830-192
637860794:SYN_02318248-296
Syntrophus gentianae, DSM8423 Ga0074853_11643:Sgen_0212930-192
Ruminococcus callidus, ATCC 27760 Rcal_002053-178
Rcal_007175-179

PF07683:CobW_C. Cobalamin synthesis protein cobW C-terminal domain

Found 58 similar signatures
Acetivibrio alkalicellulosi, DSM 17461 2510063461:NJMEOJLD_03640252-338
Pseudobacteroides cellulosolvens, DSM 2933 WP_036943892.1:NEIHKHHH_00619242-326
Ruminococcus albus_7, DSM 20455 WP_013497780.1:HCIAFFOI_01119251-367
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11444:GJLLLGJL_00431216-295
Paenibacillus guangzhouensis, KCTC 33171 KDFAKKPF_02902169-285
FD_MS_7_1, AnGL28 AnGL28_01081280-396
FD_SO4_37_1, AnGL2 AnGL2_00211280-396
FD_YE_37_3, AnGL26 AnGL26_03852223-315
AnGL26_03968210-284
Terrisporobacter hibernicus, AnGL54 AnGL54_01188219-303
Sunxiuqinia elliptica, AnGL22 AnGL22_03848223-315
AnGL22_03964210-284
Paraclostridium benzoelyticum, AnGL27 AnGL27_02811235-303
Methylobacterium radiotolerans, GTSA1 PaGL#34_01035261-377
PaGL#34_02638245-341
PaGL#34_03435254-343
PaGL#34_04011239-334
PaGL#34_05138227-297
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_05450256-376
Variovorax sp., EBFNA2 PaGL#33_00825254-349
PaGL#33_03830268-349
PaGL#33_04270256-372
Variovorax paradoxus, 2u118 PaGL#32_00844253-348
PaGL#32_02596227-322
PaGL#32_03743256-372
PaGL#32_03948231-318
Dietzia cinnamea, 55 PaGL#56_00777255-340
Maridesulfovibrio salexigens, AnGL23 AnGL23_02889521-602
Exiguobacterium mexicanum, AnGL24 AnGL24_01454214-305
AnGL24_01667255-371
Clostridium subterminale, CB-LS10-1 AnGL53_00815219-286
AnGL53_02357217-298
Priestia megaterium, 10L1 PaGL#57_02677255-371
PaGL#57_05467217-299
Variovorax paradoxus, SPNA7 PaGL#43_00835253-348
PaGL#43_02850227-322
PaGL#43_03787256-372
PaGL#43_03991230-317
Methylorubrum populi, CTY4 PaGL#39_01054254-350
PaGL#39_01291264-343
PaGL#39_01577233-327
PaGL#39_02416261-377
Fictibacillus phosphorivorans, TY7 PaGL#38_01766216-299
Methanospirillum hungatei, GP1 MhGP1_00866250-343
Bacillus subtilis, 30VD-1 PaGL#66_03858258-374
Peribacillus frigoritolerans, 30N-5 PaGL#67_00794256-372
PaGL#67_02677219-301
PaGL#67_03583230-325
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01916219-303
Niallia taxi, AG-1 PaGL#37_04434258-374
PaGL#37_01146255-371
PaGL#37_02236226-305
PaGL#37_02395217-299
Methanospirillum.hungatei GP1, MhGP1 8064048709:MhGP1_02036250-343
MPOB, Sfum 639703498:Sfum_02802208-292
639704383:Sfum_03698530-607
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11444:Swol_00431216-295
Ruminococcus callidus, ATCC 27760 Rcal_00205313-401
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