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PaGL#33_04931 Locus tags: • Sequence Length: 1025

Variovorax sp., EBFNA2 Batch2_genome_fasta/V.boronicumulans

50501001001501502002002502503003003503504004004504505005005505506006006506507007007507508008008508509009009509501000100010501050
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PaGL#33_04926 PaGL#33_04928 PaGL#33_04931 PaGL#33_04932 PaGL#33_04933 PaGL#33_04935 
    [PF05954]_[PF04717]_[PF13296]_[PF10106]

    [51:PF05954]_[468:PF04717]_[545:PF13296]_[705:PF10106]

    [468:IPR006531]_[545:IPR028244]_[705:IPR018769]

Looking for similar signatures in the working genomes

PF05954:Phage_GPD. Phage tail baseplate hub (GPD)

Found 50 similar signatures
Acetivibrio alkalicellulosi, DSM 17461 2510063285:NJMEOJLD_0347265-163
Pseudobacteroides cellulosolvens, DSM 2933 WP_036940167.1:NEIHKHHH_0582957-168
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697824.1:PROKKA_0255241-333
FD_YE_37_9_2, AnGL4 AnGL4_02936111-184
FD-YE-37-9-3, AnGL29 AnGL29_00194111-184
Variovorax sp., EBFNA2 PaGL#33_0025623-326
PaGL#33_0646750-363
PaGL#33_0057925-334
PaGL#33_0150350-254
PaGL#33_0234862-381
PaGL#33_0297723-325
PaGL#33_0493151-366
PaGL#33_0580556-370
PaGL#33_0581049-363
PaGL#33_0583049-368
Variovorax paradoxus, 2u118 PaGL#32_0022123-327
PaGL#32_0022223-327
PaGL#32_0022323-325
PaGL#32_0030348-363
PaGL#32_0056825-334
PaGL#32_0057325-331
PaGL#32_0083441-347
PaGL#32_0622322-126
PaGL#32_0634822-328
PaGL#32_0118922-331
PaGL#32_0202541-348
PaGL#32_0251323-325
PaGL#32_0349122-329
PaGL#32_0388123-325
PaGL#32_0390122-331
PaGL#32_0395722-329
Maridesulfovibrio salexigens, AnGL23 AnGL23_0281928-331
Variovorax paradoxus, SPNA7 PaGL#43_0021623-327
PaGL#43_0021724-327
PaGL#43_0021824-327
PaGL#43_0026933-348
PaGL#43_0054325-334
PaGL#43_0054825-331
PaGL#43_0617136-350
PaGL#43_0630022-329
PaGL#43_0082541-348
PaGL#43_0129741-348
PaGL#43_0213541-348
PaGL#43_0276423-325
PaGL#43_0348422-325
PaGL#43_0392823-325
PaGL#43_0400022-329
PaGL#43_0518541-348
Micromonospora inositola, Utrum1 PaGL#61_0445327-319
Mucilaginibacter gossypii, cycad 4 PaGL#42_0321254-332

PF04717:Phage_base_V. Type VI secretion system/phage-baseplate injector OB domain

Found 60 similar signatures
Pseudobacteroides cellulosolvens, DSM 2933 WP_036943931.1:NEIHKHHH_0059224-98
WP_036938976.1:NEIHKHHH_03259292-357
WP_036940167.1:NEIHKHHH_05829292-361
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137697825.1:PROKKA_0255124-101
WP_137696792.1:PROKKA_02818410-488
FD_YE_37_3, AnGL26 AnGL26_00024380-454
Syntrophus buswellii, Sbus Sbus_0014721-98
Sbus_0096819-95
Sbus_0242353-95
Sunxiuqinia elliptica, AnGL22 AnGL22_00024380-454
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_03826378-453
Variovorax sp., EBFNA2 PaGL#33_00256381-449
PaGL#33_06467418-482
PaGL#33_00579430-499
PaGL#33_02348505-576
PaGL#33_02977378-447
PaGL#33_04931468-517
PaGL#33_05805472-521
PaGL#33_05810488-538
PaGL#33_05830490-559
Variovorax paradoxus, 2u118 PaGL#32_00221382-450
PaGL#32_00222382-450
PaGL#32_00223380-448
PaGL#32_00303417-485
PaGL#32_00568429-499
PaGL#32_00573430-499
PaGL#32_00834404-471
PaGL#32_06348385-452
PaGL#32_01189393-462
PaGL#32_02025405-472
PaGL#32_02513378-447
PaGL#32_03491387-452
PaGL#32_03881380-448
PaGL#32_03901392-462
PaGL#32_03957386-453
Maridesulfovibrio salexigens, AnGL23 AnGL23_02819412-458
Variovorax paradoxus, SPNA7 PaGL#43_00216382-450
PaGL#43_00217382-450
PaGL#43_00218381-449
PaGL#43_00269402-470
PaGL#43_00543431-500
PaGL#43_00548430-499
PaGL#43_06171405-473
PaGL#43_06300386-453
PaGL#43_00825405-472
PaGL#43_01297405-472
PaGL#43_02135405-472
PaGL#43_02764378-447
PaGL#43_03484382-449
PaGL#43_03928380-448
PaGL#43_04000386-453
PaGL#43_05185405-472
Micromonospora inositola, Utrum1 PaGL#61_04453344-417
Sphingomonas sp., CR2A3 PaGL#62_01218379-453
MPOB, Sfum 639704598:Sfum_0392320-98
Syntrophus gentianae, DSM8423 Ga0074853_10151:Sgen_0005053-95
Ga0074853_103116:Sgen_0054119-95
Mucilaginibacter gossypii, cycad 4 PaGL#42_01667369-445
PaGL#42_02823378-453
PaGL#42_03212364-444

PF13296:T6SS_Vgr. Putative type VI secretion system Rhs element Vgr

Found 19 similar signatures
Variovorax sp., EBFNA2 PaGL#33_06467514-619
PaGL#33_02348645-755
PaGL#33_04931545-654
PaGL#33_05805549-658
PaGL#33_05810596-700
PaGL#33_05830628-738
Variovorax paradoxus, 2u118 PaGL#32_00834493-602
PaGL#32_06348474-583
PaGL#32_02025494-603
PaGL#32_03491475-584
PaGL#32_03901488-589
PaGL#32_03957475-584
Variovorax paradoxus, SPNA7 PaGL#43_06300475-584
PaGL#43_00825494-603
PaGL#43_01297494-603
PaGL#43_02135494-603
PaGL#43_03484471-580
PaGL#43_04000475-584
PaGL#43_05185494-603

PF10106:DUF2345. Uncharacterized protein conserved in bacteria (DUF2345)

Found 19 similar signatures
Variovorax sp., EBFNA2 PaGL#33_06467652-799
PaGL#33_02348814-970
PaGL#33_04931705-854
PaGL#33_05805709-859
PaGL#33_05810754-915
PaGL#33_05830797-953
Variovorax paradoxus, 2u118 PaGL#32_00834634-782
PaGL#32_06348616-763
PaGL#32_02025636-783
PaGL#32_03491616-764
PaGL#32_03901660-801
PaGL#32_03957618-764
Variovorax paradoxus, SPNA7 PaGL#43_06300616-764
PaGL#43_00825636-783
PaGL#43_01297636-783
PaGL#43_02135635-783
PaGL#43_03484613-760
PaGL#43_04000618-764
PaGL#43_05185637-783
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