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PaGL#32_00876 Locus tags: • Sequence Length: 720

Variovorax paradoxus, 2u118 Batch2_genome_fasta/V.paradoxus

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unknown PaGL#32_00875 PaGL#32_06210 PaGL#32_00876 PaGL#32_06211 PaGL#32_00877 PaGL#32_06213 PaGL#32_00878 
    [PF00773]_[PF00773]

    [242:PF00773]_[492:PF00773]

    [234:IPR001900]_[236:IPR012340]_[242:IPR001900]_[492:IPR001900]

Looking for similar signatures in the working genomes

PF00773:RNB. RNB domain

Found 73 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003518023.1:LOMAGDGF_02156245-574
Clostridium acetobutylicum, DSM 1731 WP_010964034.1:FHOCHPCF_00761243-572
Acetivibrio alkalicellulosi, DSM 17461 2510062613:NJMEOJLD_02811244-573
Pseudobacteroides cellulosolvens, DSM 2933 WP_036938886.1:NEIHKHHH_03791249-578
Ruminococcus albus_7, DSM 20455 WP_013497312.1:HCIAFFOI_00594242-570
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11304:GJLLLGJL_00294245-572
Paenibacillus guangzhouensis, KCTC 33171 WP_152395636.1:KDFAKKPF_04679247-577
Clostridium acetobutylicum, ATCC 824 WP_010964034.1:OJAMHIDJ_00763243-572
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698415.1:PROKKA_01037248-577
Syntrophomonas erecta, DSM 16215 OINOEOOJ_01983259-586
FD_25_22, AnGL7 AnGL7_00303259-586
AnGL7_02144189-518
FD_25_27, AnGL8 AnGL8_00098191-519
AnGL8_01499271-599
FD_MS_7_1, AnGL28 AnGL28_02096253-576
AnGL28_02169230-522
FD_SO4_25_1_F22, AnGL30 AnGL30_00974286-615
FD_SO4_37_1, AnGL2 AnGL2_01225253-576
AnGL2_01298230-522
FD_YE_25_21, AnGL21 AnGL21_04335192-521
AnGL21_00252266-593
FD_YE_37_3, AnGL26 AnGL26_01975261-590
FD_YE_37_8_2, AnGL3 AnGL3_02468256-588
FD_YE_37_9_2, AnGL4 AnGL4_03229258-586
Syntrophomonas curvata, Scurva Scurva_00344244-571
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01589259-586
Syntrophomonas wolfei methylbutyratica, Swm Swm_00267245-572
Terrisporobacter hibernicus, AnGL54 AnGL54_03603246-576
FD-25-21, AnGL21 AnGL21_00398189-518
AnGL21_02332259-586
Sunxiuqinia elliptica, AnGL22 AnGL22_01972261-590
Paraclostridium benzoelyticum, AnGL27 AnGL27_01018246-576
FD-MS-7-8, AnGL9 AnGL9_01752229-521
AnGL9_02348253-576
FD-YE-37-9-3, AnGL29 AnGL29_00487258-586
Methylobacterium radiotolerans, GTSA1 PaGL#34_03897265-594
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_03448255-583
Syntrophomonas erecta, GB-438 Ga0610585_01983259-586
Variovorax sp., EBFNA2 PaGL#33_00858242-482
493-529
PaGL#33_02833178-510
Variovorax paradoxus, 2u118 PaGL#32_00876242-481
492-528
PaGL#32_02986161-493
Maridesulfovibrio salexigens, AnGL23 AnGL23_00098280-607
AnGL23_01779294-575
Exiguobacterium mexicanum, AnGL24 AnGL24_02143245-575
Clostridium subterminale, CB-LS10-1 AnGL53_00527243-573
Priestia megaterium, 10L1 PaGL#57_02505249-578
Variovorax paradoxus, SPNA7 PaGL#43_00867242-481
492-528
PaGL#43_03038161-493
Methanospirillum lacunae, Ki8-1 MLKi8_0293249-381
Geodermatophilus sp., RDM14 PaGL#36_0016759-364
Methylorubrum populi, CTY4 PaGL#39_02121263-592
Fictibacillus phosphorivorans, TY7 PaGL#38_03988242-572
Methanospirillum hungatei, GP1 MhGP1_0288248-379
Methanospirillum stamsii, Pt1 MLKi8_0348248-379
Syntrophomonas wolfei, saponavida Swsap_01393244-571
Bacillus subtilis, 30VD-1 PaGL#66_00943247-576
Peribacillus frigoritolerans, 30N-5 PaGL#67_00606250-579
Micromonospora inositola, Utrum1 PaGL#61_0549448-353
Sphingomonas sp., CR2A3 PaGL#62_01729248-611
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00433246-576
Niallia taxi, AG-1 PaGL#37_03380248-577
Methanospirillum.hungatei GP1, MhGP1 8064046645:MhGP1_0002148-379
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112069:Mhun_0206848-379
MPOB, Sfum 639701490:Sfum_00756283-569
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_105132:Spalm_01009244-571
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11304:Swol_00294245-572
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_12859:Szehn_01718247-574
Mucilaginibacter gossypii, cycad 4 PaGL#42_02365256-584
Ruminococcus callidus, ATCC 27760 Rcal_00447253-581

PF00773:RNB. RNB domain

Found 73 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003518023.1:LOMAGDGF_02156245-574
Clostridium acetobutylicum, DSM 1731 WP_010964034.1:FHOCHPCF_00761243-572
Acetivibrio alkalicellulosi, DSM 17461 2510062613:NJMEOJLD_02811244-573
Pseudobacteroides cellulosolvens, DSM 2933 WP_036938886.1:NEIHKHHH_03791249-578
Ruminococcus albus_7, DSM 20455 WP_013497312.1:HCIAFFOI_00594242-570
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11304:GJLLLGJL_00294245-572
Paenibacillus guangzhouensis, KCTC 33171 WP_152395636.1:KDFAKKPF_04679247-577
Clostridium acetobutylicum, ATCC 824 WP_010964034.1:OJAMHIDJ_00763243-572
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137698415.1:PROKKA_01037248-577
Syntrophomonas erecta, DSM 16215 OINOEOOJ_01983259-586
FD_25_22, AnGL7 AnGL7_00303259-586
AnGL7_02144189-518
FD_25_27, AnGL8 AnGL8_00098191-519
AnGL8_01499271-599
FD_MS_7_1, AnGL28 AnGL28_02096253-576
AnGL28_02169230-522
FD_SO4_25_1_F22, AnGL30 AnGL30_00974286-615
FD_SO4_37_1, AnGL2 AnGL2_01225253-576
AnGL2_01298230-522
FD_YE_25_21, AnGL21 AnGL21_04335192-521
AnGL21_00252266-593
FD_YE_37_3, AnGL26 AnGL26_01975261-590
FD_YE_37_8_2, AnGL3 AnGL3_02468256-588
FD_YE_37_9_2, AnGL4 AnGL4_03229258-586
Syntrophomonas curvata, Scurva Scurva_00344244-571
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01589259-586
Syntrophomonas wolfei methylbutyratica, Swm Swm_00267245-572
Terrisporobacter hibernicus, AnGL54 AnGL54_03603246-576
FD-25-21, AnGL21 AnGL21_00398189-518
AnGL21_02332259-586
Sunxiuqinia elliptica, AnGL22 AnGL22_01972261-590
Paraclostridium benzoelyticum, AnGL27 AnGL27_01018246-576
FD-MS-7-8, AnGL9 AnGL9_01752229-521
AnGL9_02348253-576
FD-YE-37-9-3, AnGL29 AnGL29_00487258-586
Methylobacterium radiotolerans, GTSA1 PaGL#34_03897265-594
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_03448255-583
Syntrophomonas erecta, GB-438 Ga0610585_01983259-586
Variovorax sp., EBFNA2 PaGL#33_00858242-482
493-529
PaGL#33_02833178-510
Variovorax paradoxus, 2u118 PaGL#32_00876242-481
492-528
PaGL#32_02986161-493
Maridesulfovibrio salexigens, AnGL23 AnGL23_00098280-607
AnGL23_01779294-575
Exiguobacterium mexicanum, AnGL24 AnGL24_02143245-575
Clostridium subterminale, CB-LS10-1 AnGL53_00527243-573
Priestia megaterium, 10L1 PaGL#57_02505249-578
Variovorax paradoxus, SPNA7 PaGL#43_00867242-481
492-528
PaGL#43_03038161-493
Methanospirillum lacunae, Ki8-1 MLKi8_0293249-381
Geodermatophilus sp., RDM14 PaGL#36_0016759-364
Methylorubrum populi, CTY4 PaGL#39_02121263-592
Fictibacillus phosphorivorans, TY7 PaGL#38_03988242-572
Methanospirillum hungatei, GP1 MhGP1_0288248-379
Methanospirillum stamsii, Pt1 MLKi8_0348248-379
Syntrophomonas wolfei, saponavida Swsap_01393244-571
Bacillus subtilis, 30VD-1 PaGL#66_00943247-576
Peribacillus frigoritolerans, 30N-5 PaGL#67_00606250-579
Micromonospora inositola, Utrum1 PaGL#61_0549448-353
Sphingomonas sp., CR2A3 PaGL#62_01729248-611
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00433246-576
Niallia taxi, AG-1 PaGL#37_03380248-577
Methanospirillum.hungatei GP1, MhGP1 8064046645:MhGP1_0002148-379
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112069:Mhun_0206848-379
MPOB, Sfum 639701490:Sfum_00756283-569
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_105132:Spalm_01009244-571
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11304:Swol_00294245-572
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_12859:Szehn_01718247-574
Mucilaginibacter gossypii, cycad 4 PaGL#42_02365256-584
Ruminococcus callidus, ATCC 27760 Rcal_00447253-581
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