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PaGL#32_04010 Locus tags: • Sequence Length: 281

Variovorax paradoxus, 2u118 Batch2_genome_fasta/V.paradoxus

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PaGL#32_04005 PaGL#32_04006 PaGL#32_04007 PaGL#32_04008 PaGL#32_04009 PaGL#32_04014 PaGL#32_04015 
    [PF02625]_[PF13478]

    [12:PF02625]_[116:PF13478]

    [12:IPR003777]_[116:IPR027051]

Looking for similar signatures in the working genomes

PF02625:XdhC_CoxI. XdhC and CoxI family

Found 44 similar signatures
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_1137:GJLLLGJL_0003622-84
Ga0065332_111197:GJLLLGJL_01172283-343
FD_25_22, AnGL7 AnGL7_0134516-73
FD_YE_25_21, AnGL21 AnGL21_0338424-81
Syntrophus buswellii, Sbus Sbus_026348-70
Syntrophomonas wolfei methylbutyratica, Swm Swm_0217119-86
Terrisporobacter hibernicus, AnGL54 AnGL54_0431710-71
FD-25-21, AnGL21 AnGL21_0122216-73
Paraclostridium benzoelyticum, AnGL27 AnGL27_0223013-72
Methylobacterium radiotolerans, GTSA1 PaGL#34_0378914-82
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0142214-81
Variovorax sp., EBFNA2 PaGL#33_0163313-70
PaGL#33_0181414-74
Variovorax paradoxus, 2u118 PaGL#32_0159014-74
PaGL#32_0401012-77
Dietzia cinnamea, 55 PaGL#56_0112622-90
PaGL#56_0262610-75
Maridesulfovibrio salexigens, AnGL23 AnGL23_0296111-70
Clostridium subterminale, CB-LS10-1 AnGL53_0162614-78
Priestia megaterium, 10L1 PaGL#57_0488315-74
Variovorax paradoxus, SPNA7 PaGL#43_0158414-74
PaGL#43_0406412-77
Methanospirillum lacunae, Ki8-1 MLKi8_001478-66
Geodermatophilus sp., RDM14 PaGL#36_0206010-67
PaGL#36_0419510-78
116-179
Methylorubrum populi, CTY4 PaGL#39_0087214-82
Fictibacillus phosphorivorans, TY7 PaGL#38_0325217-78
Methanospirillum hungatei, GP1 MhGP1_004348-69
Bacillus subtilis, 30VD-1 PaGL#66_0105911-75
Peribacillus frigoritolerans, 30N-5 PaGL#67_0368211-75
Micromonospora inositola, Utrum1 PaGL#61_0694310-78
116-177
Sphingomonas sp., CR2A3 PaGL#62_0216914-78
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0114610-71
Niallia taxi, AG-1 PaGL#37_0189819-78
Methanospirillum.hungatei GP1, MhGP1 8064049148:MhGP1_024688-69
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112986:Mhun_029838-69
MPOB, Sfum 639702085:Sfum_0136210-73
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_1137:Swol_0003622-84
Ga0065332_111197:Swol_01172283-343
Syntrophus aciditrophicus, SB 637861109:SYN_025958-69
Syntrophus gentianae, DSM8423 Ga0074853_13319:Sgen_029428-69
Mucilaginibacter gossypii, cycad 4 PaGL#42_0077115-81

PF13478:XdhC_C. XdhC Rossmann domain

Found 50 similar signatures
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_1137:GJLLLGJL_00036107-250
Ga0065332_111197:GJLLLGJL_0117290-233
Ga0065332_111932:GJLLLGJL_0189736-114
FD_25_22, AnGL7 AnGL7_01345110-255
FD_YE_25_21, AnGL21 AnGL21_03384123-266
Syntrophus buswellii, Sbus Sbus_02634110-252
Syntrophomonas wolfei methylbutyratica, Swm Swm_0003098-241
Swm_02171203-345
Terrisporobacter hibernicus, AnGL54 AnGL54_04317191-332
AnGL54_0107345-144
FD-25-21, AnGL21 AnGL21_01222110-255
Paraclostridium benzoelyticum, AnGL27 AnGL27_02230107-250
Methylobacterium radiotolerans, GTSA1 PaGL#34_0378876-220
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_01422202-347
Variovorax sp., EBFNA2 PaGL#33_01633116-263
PaGL#33_01814170-313
Variovorax paradoxus, 2u118 PaGL#32_01590170-313
PaGL#32_04010116-263
Dietzia cinnamea, 55 PaGL#56_01126222-365
PaGL#56_02626204-347
Maridesulfovibrio salexigens, AnGL23 AnGL23_02961194-338
Clostridium subterminale, CB-LS10-1 AnGL53_01626107-250
Priestia megaterium, 10L1 PaGL#57_04883187-322
Variovorax paradoxus, SPNA7 PaGL#43_01584170-313
PaGL#43_04064116-263
Methanospirillum lacunae, Ki8-1 MLKi8_00147113-254
Geodermatophilus sp., RDM14 PaGL#36_02060108-258
PaGL#36_03503353-479
PaGL#36_04195201-348
Methylorubrum populi, CTY4 PaGL#39_0087178-220
Fictibacillus phosphorivorans, TY7 PaGL#38_03252200-343
Methanospirillum hungatei, GP1 MhGP1_00434112-254
Syntrophomonas wolfei, saponavida Swsap_0073818-161
Swsap_0334517-160
Bacillus subtilis, 30VD-1 PaGL#66_01059184-320
Peribacillus frigoritolerans, 30N-5 PaGL#67_03682105-247
Micromonospora inositola, Utrum1 PaGL#61_06943196-343
Sphingomonas sp., CR2A3 PaGL#62_02169153-294
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_01146191-332
AnGL54_0180145-144
Niallia taxi, AG-1 PaGL#37_01898186-322
Methanospirillum.hungatei GP1, MhGP1 8064049148:MhGP1_02468112-254
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_112986:Mhun_02983112-254
MPOB, Sfum 639702085:Sfum_01362193-337
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_1137:Swol_00036107-250
Ga0065332_111197:Swol_0117290-233
Ga0065332_111932:Swol_0189736-114
Syntrophus aciditrophicus, SB 637861109:SYN_02595110-252
Syntrophus gentianae, DSM8423 Ga0074853_13319:Sgen_02942110-252
Mucilaginibacter gossypii, cycad 4 PaGL#42_00771205-350
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