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PaGL#32_04183 Locus tags: • Sequence Length: 306

Variovorax paradoxus, 2u118 Batch2_genome_fasta/V.paradoxus

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PaGL#32_04178 PaGL#32_04179 PaGL#32_04180 PaGL#32_04182 PaGL#32_04183 PaGL#32_04184 PaGL#32_04188 
    [SP]_[PF02749]_[PF01729]_[TM]

    [SP]_[29:PF02749]_[117:PF01729]_[TM]

    [SP]_[23:IPR004393]_[29:IPR022412]_[117:IPR002638]_[117:IPR036068]_[TM]

Looking for similar signatures in the working genomes

PF02749:QRPTase_N. Quinolinate phosphoribosyl transferase, N-terminal domain

Found 74 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003513372.1:LOMAGDGF_0310518-108
Clostridium acetobutylicum, DSM 1731 WP_010964341.1:FHOCHPCF_0107619-106
Acetivibrio alkalicellulosi, DSM 17461 2510060845:NJMEOJLD_0108219-108
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946411.1:NEIHKHHH_0044015-103
WP_036935011.1:NEIHKHHH_0505720-108
Ruminococcus albus_7, DSM 20455 WP_013499693.1:HCIAFFOI_0321320-109
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11121:GJLLLGJL_0011718-107
Paenibacillus guangzhouensis, KCTC 33171 WP_152395753.1:KDFAKKPF_0483020-110
Clostridium acetobutylicum, ATCC 824 WP_010964341.1:OJAMHIDJ_0107919-106
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137699119.1:PROKKA_0384020-109
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0210017-107
FD_25_22, AnGL7 AnGL7_0101124-111
FD_25_27, AnGL8 AnGL8_0048026-118
FD_MS_7_1, AnGL28 AnGL28_0248828-115
FD_SO4_37_1, AnGL2 AnGL2_0161728-115
FD_YE_25_21, AnGL21 AnGL21_0186717-104
AnGL21_0261541-127
FD_YE_37_3, AnGL26 AnGL26_0127423-111
FD_YE_37_8_2, AnGL3 AnGL3_0120216-100
AnGL3_0144717-107
FD_YE_37_9_2, AnGL4 AnGL4_0284022-111
Syntrophus buswellii, Sbus Sbus_0074921-111
Syntrophomonas curvata, Scurva Scurva_0019817-107
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0147217-107
Syntrophomonas wolfei methylbutyratica, Swm Swm_0011718-107
Terrisporobacter hibernicus, AnGL54 AnGL54_0380519-107
FD-25-21, AnGL21 AnGL21_0154024-111
Sunxiuqinia elliptica, AnGL22 AnGL22_0127623-111
FD-MS-7-8, AnGL9 AnGL9_0149328-115
FD-YE-37-9-3, AnGL29 AnGL29_0009822-111
Methylobacterium radiotolerans, GTSA1 PaGL#34_0591232-120
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0214317-107
Syntrophomonas erecta, GB-438 Ga0610585_0210017-107
Variovorax sp., EBFNA2 PaGL#33_0135629-116
Variovorax paradoxus, 2u118 PaGL#32_0418329-116
Dietzia cinnamea, 55 PaGL#56_0128942-135
Maridesulfovibrio salexigens, AnGL23 AnGL23_0133030-119
Exiguobacterium mexicanum, AnGL24 AnGL24_0103417-104
Clostridium subterminale, CB-LS10-1 AnGL53_0104822-110
Priestia megaterium, 10L1 PaGL#57_0290017-107
Variovorax paradoxus, SPNA7 PaGL#43_0433929-116
Methanospirillum lacunae, Ki8-1 MLKi8_0047619-105
Geodermatophilus sp., RDM14 PaGL#36_0138337-125
Methylorubrum populi, CTY4 PaGL#39_0235328-116
Fictibacillus phosphorivorans, TY7 PaGL#38_0341917-106
PaGL#38_0359744-111
Methanospirillum hungatei, GP1 MhGP1_0042017-104
MhGP1_0069720-105
Methanospirillum stamsii, Pt1 MLKi8_0055717-105
MLKi8_0094719-105
Syntrophomonas wolfei, saponavida Swsap_0129114-104
Swsap_0317515-103
Bacillus subtilis, 30VD-1 PaGL#66_01556533-622
Peribacillus frigoritolerans, 30N-5 PaGL#67_0200018-107
Micromonospora inositola, Utrum1 PaGL#61_0677934-128
Sphingomonas sp., CR2A3 PaGL#62_0358723-112
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0063519-107
Niallia taxi, AG-1 PaGL#37_0172917-107
Methanospirillum.hungatei GP1, MhGP1 8064048882:MhGP1_0220520-105
8064049162:MhGP1_0248217-104
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_113003:Mhun_0300017-104
Ga0065338_113348:Mhun_0334419-106
MPOB, Sfum 639700948:Sfum_0020715-105
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10952:Spalm_0147316-106
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11121:Swol_0011718-107
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_12514:Szehn_0119616-103
Szehn_0047118-107
Syntrophus aciditrophicus, SB 637860286:SYN_0185121-111
637861243:SYN_0271719-104
Syntrophus gentianae, DSM8423 Ga0074853_12225:Sgen_0251321-111
Ga0074853_13331:Sgen_029542-83
Mucilaginibacter gossypii, cycad 4 PaGL#42_0020117-107
Ruminococcus callidus, ATCC 27760 Rcal_0026119-108
Rcal_0244821-108

PF01729:QRPTase_C. Quinolinate phosphoribosyl transferase, C-terminal domain

Found 76 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003513372.1:LOMAGDGF_03105109-275
Clostridium acetobutylicum, DSM 1731 WP_010964341.1:FHOCHPCF_01076107-273
Acetivibrio alkalicellulosi, DSM 17461 2510060845:NJMEOJLD_01082109-275
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946411.1:NEIHKHHH_00440104-274
WP_036935011.1:NEIHKHHH_05057109-275
Ruminococcus albus_7, DSM 20455 WP_013499693.1:HCIAFFOI_03213110-276
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11121:GJLLLGJL_00117108-274
Paenibacillus guangzhouensis, KCTC 33171 WP_152395753.1:KDFAKKPF_04830111-280
Clostridium acetobutylicum, ATCC 824 WP_010964341.1:OJAMHIDJ_01079107-273
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137699119.1:PROKKA_03840110-275
Syntrophomonas erecta, DSM 16215 OINOEOOJ_02100108-273
FD_25_22, AnGL7 AnGL7_01011112-281
FD_25_27, AnGL8 AnGL8_00480119-288
FD_MS_7_1, AnGL28 AnGL28_02488116-286
FD_SO4_37_1, AnGL2 AnGL2_01617116-286
FD_YE_25_21, AnGL21 AnGL21_01867105-276
AnGL21_02615129-293
FD_YE_37_3, AnGL26 AnGL26_01274112-276
FD_YE_37_8_2, AnGL3 AnGL3_01202105-276
AnGL3_01447108-278
FD_YE_37_9_2, AnGL4 AnGL4_02840112-282
Syntrophus buswellii, Sbus Sbus_00749112-277
Syntrophomonas curvata, Scurva Scurva_00198108-273
Syntrophomonas erecta sporosyntropha, Sespor Sespor_01472108-273
Syntrophomonas wolfei methylbutyratica, Swm Swm_00117108-274
Terrisporobacter hibernicus, AnGL54 AnGL54_03805108-274
FD-25-21, AnGL21 AnGL21_01540112-281
Sunxiuqinia elliptica, AnGL22 AnGL22_01276112-276
FD-MS-7-8, AnGL9 AnGL9_01493116-286
FD-YE-37-9-3, AnGL29 AnGL29_00098112-282
Methylobacterium radiotolerans, GTSA1 PaGL#34_05912121-288
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_02143108-278
Syntrophomonas erecta, GB-438 Ga0610585_02100108-273
Variovorax sp., EBFNA2 PaGL#33_01356117-288
Variovorax paradoxus, 2u118 PaGL#32_04183117-288
Dietzia cinnamea, 55 PaGL#56_01289136-304
Maridesulfovibrio salexigens, AnGL23 AnGL23_01330120-287
Exiguobacterium mexicanum, AnGL24 AnGL24_01034105-270
Clostridium subterminale, CB-LS10-1 AnGL53_01048111-277
Priestia megaterium, 10L1 PaGL#57_02900108-274
Variovorax paradoxus, SPNA7 PaGL#43_04339117-288
Methanospirillum lacunae, Ki8-1 MLKi8_00476106-277
Geodermatophilus sp., RDM14 PaGL#36_01277140-309
PaGL#36_01383126-291
Methylorubrum populi, CTY4 PaGL#39_02353117-284
Fictibacillus phosphorivorans, TY7 PaGL#38_03419107-271
PaGL#38_03597127-327
Methanospirillum hungatei, GP1 MhGP1_00420105-275
MhGP1_00697106-277
Methanospirillum stamsii, Pt1 MLKi8_00557106-277
MLKi8_00947106-277
Syntrophomonas wolfei, saponavida Swsap_01291105-270
Swsap_03175104-265
Bacillus subtilis, 30VD-1 PaGL#66_01556623-789
Peribacillus frigoritolerans, 30N-5 PaGL#67_02000108-272
Micromonospora inositola, Utrum1 PaGL#61_01445136-307
PaGL#61_06779129-294
Sphingomonas sp., CR2A3 PaGL#62_03587113-277
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00635108-274
Niallia taxi, AG-1 PaGL#37_01729108-274
Methanospirillum.hungatei GP1, MhGP1 8064048882:MhGP1_02205106-277
8064049162:MhGP1_02482105-275
Methanospirillum.hungatei.JF-1, MhunJF1 Ga0065338_113003:Mhun_03000105-274
Ga0065338_113348:Mhun_03344107-278
MPOB, Sfum 639700948:Sfum_00207106-272
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_10952:Spalm_01473107-272
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11121:Swol_00117108-274
Syntrophomonas zehnderi, OL-4 Szehn Ga0124040_12514:Szehn_01196104-274
Szehn_00471108-273
Syntrophus aciditrophicus, SB 637860286:SYN_01851112-277
637861243:SYN_02717105-273
Syntrophus gentianae, DSM8423 Ga0074853_12225:Sgen_02513112-277
Ga0074853_13331:Sgen_0295486-138
Mucilaginibacter gossypii, cycad 4 PaGL#42_00201108-278
Ruminococcus callidus, ATCC 27760 Rcal_00261109-275
Rcal_02448109-270
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