Cellulosome Database Gene Detail

PaGL#32_04700 Locus tags: • Sequence Length: 457

Variovorax paradoxus, 2u118 Batch2_genome_fasta/V.paradoxus

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    [PF13855]_[PF07714]

    [89:PF13855]_[208:PF07714]

    [36:IPR003591]_[36:IPR001611]_[57:IPR003591]_[89:IPR001611]_[103:IPR003591]_[127:IPR003591]_[150:IPR003591]_[201:IPR011009]_[207:IPR000719]_[208:IPR001245]

Looking for similar signatures in the working genomes

PF13855:LRR_8. Leucine rich repeat

Found 24 similar signatures

Acetivibrio alkalicellulosi, DSM 17461	2510060638:NJMEOJLD_00882	516-573
	2510062060:NJMEOJLD_02268	159-213
	2510062899:NJMEOJLD_03084	90-106
		199-219
		332-349
	2510063234:NJMEOJLD_03420	399-414
	2510064191:NJMEOJLD_04356	139-198
		231-290
		300-359
		362-405
		415-474
Pseudobacteroides cellulosolvens, DSM 2933	WP_050753187.1:NEIHKHHH_01303	384-444
		863-880
	WP_050753958.1:NEIHKHHH_05818	208-222
		315-371
Ruminiclostridium herbifermentans MA18, DSM 109966	WP_137697522.1:PROKKA_00572	51-107
FD_YE_37_3, AnGL26	AnGL26_03847	60-115
Terrisporobacter hibernicus, AnGL54	AnGL54_02547	257-315
Sunxiuqinia elliptica, AnGL22	AnGL22_03843	60-115
Variovorax paradoxus, 2u118	PaGL#32_04700	89-140
Methylorubrum populi, CTY4	PaGL#39_02786	108-166
Micromonospora inositola, Utrum1	PaGL#61_05141	61-118
		121-164
Terrisporobacter hibernicus, CB-LS-10-2	AnGL54_03351	257-315

PF07714:PK_Tyr_Ser-Thr. Protein tyrosine and serine/threonine kinase

Found 3 similar signatures

Methylobacterium radiotolerans, GTSA1	PaGL#34_00987	205-367
Variovorax sp., EBFNA2	PaGL#33_05445	206-366
Variovorax paradoxus, 2u118	PaGL#32_04700	208-375

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