SMPP Home

PaGL#56_01465 Locus tags: • Sequence Length: 265

Dietzia cinnamea, 55 Batch3_genome_fasta/D.cinnamea

5050100100150150200200250250300300
Show complete sequence
Click domain (colored bar) to show sequence
PaGL#56_01461 unknown PaGL#56_01466 PaGL#56_01467 PaGL#56_01470
    [PF14690]_[PF13542]

    [42:PF14690]_[97:PF13542]

    [42:IPR029261]_[97:IPR032877]
    

Looking for similar signatures in the working genomes

PF14690:Zn_ribbon_ISL3. zinc-finger of transposase IS204/IS1001/IS1096/IS1165

Found 31 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_041740025.1:LOMAGDGF_0052334-79
WP_041740033.1:LOMAGDGF_0062734-79
WP_257203607.1:LOMAGDGF_0237434-78
Pseudobacteroides cellulosolvens, DSM 2933 WP_050753891.1:NEIHKHHH_0551738-80
FD_MS_7_1, AnGL28 AnGL28_0063142-86
AnGL28_0222242-86
AnGL28_0252642-86
FD_SO4_37_1, AnGL2 AnGL2_0079642-86
AnGL2_0135142-86
AnGL2_0182042-86
Syntrophus buswellii, Sbus Sbus_0147038-83
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0418746-89
Dietzia cinnamea, 55 PaGL#56_0068553-97
PaGL#56_0078642-85
PaGL#56_0146542-85
PaGL#56_0146642-85
PaGL#56_0221342-85
PaGL#56_0323742-85
Methanospirillum stamsii, Pt1 MLKi8_0018544-88
MLKi8_0283447-91
MLKi8_0284443-87
MLKi8_0311047-91
MLKi8_0317043-86
Micromonospora inositola, Utrum1 PaGL#61_047548-38
MPOB, Sfum 639702846:Sfum_0214043-87
Syntrophus aciditrophicus, SB 637858921:SYN_0057137-82
637860236:SYN_0109337-82
637859627:SYN_0122538-84
SYN_0130937-82
637861373:SYN_0133837-82
Syntrophus gentianae, DSM8423 Ga0074853_11147:Sgen_0170639-83

PF13542:HTH_Tnp_ISL3. Helix-turn-helix domain of transposase family ISL3

Found 19 similar signatures
FD_MS_7_1, AnGL28 AnGL28_0063192-143
AnGL28_0222292-143
AnGL28_0252692-143
FD_SO4_37_1, AnGL2 AnGL2_0079692-143
AnGL2_0135192-143
AnGL2_0182092-143
Syntrophus buswellii, Sbus Sbus_0089888-135
Sbus_0131588-135
Dietzia cinnamea, 55 PaGL#56_00685106-153
PaGL#56_0146597-143
Methanospirillum stamsii, Pt1 MLKi8_0018593-143
MLKi8_013332-52
MLKi8_026812-52
MLKi8_0283496-146
MLKi8_0284492-141
MLKi8_0311096-146
MLKi8_0317091-141
Syntrophus aciditrophicus, SB 637860489:SYN_0204288-135
637861392:SYN_0285688-135
Search by locus tag: Search
↑ Top





v4.1 @copyright 2025 UCLA