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KDFAKKPF_00044 Locus tags: • Sequence Length: 265

Paenibacillus guangzhouensis, KCTC 33171 GCF_009363075.1

5050100100150150200200250250300300
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KDFAKKPF_00040 unknown KDFAKKPF_00043 KDFAKKPF_00046 KDFAKKPF_00047 KDFAKKPF_00049 
    [PF01138]_[PF03725]

    [9:PF01138]_[159:PF03725]

    [0:IPR020568]_[9:IPR001247]_[9:IPR002381]_[150:IPR036345]_[159:IPR015847]

Looking for similar signatures in the working genomes

PF01138:RNase_PH. 3' exoribonuclease family, domain 1

Found 155 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003519032.1:LOMAGDGF_0186011-142
319-453
WP_003512267.1:LOMAGDGF_0211510-141
Clostridium acetobutylicum, DSM 1731 WP_010965114.1:FHOCHPCF_0185211-142
319-453
Acetivibrio alkalicellulosi, DSM 17461 2510062532:NJMEOJLD_0273110-140
2510064025:NJMEOJLD_0419611-142
319-453
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946323.1:NEIHKHHH_0039311-142
320-453
WP_036941624.1:NEIHKHHH_024159-138
Ruminococcus albus_7, DSM 20455 WP_013499263.1:HCIAFFOI_0274314-145
321-455
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11476:GJLLLGJL_0046310-140
GJLLLGJL_0092712-143
320-454
Paenibacillus guangzhouensis, KCTC 33171 WP_152391654.1:KDFAKKPF_000449-140
WP_152392516.1:KDFAKKPF_0102811-141
321-455
Clostridium acetobutylicum, ATCC 824 WP_010965114.1:OJAMHIDJ_0186011-142
319-453
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696500.1:PROKKA_0149710-141
WP_137696049.1:PROKKA_0199411-142
319-453
Syntrophomonas erecta, DSM 16215 OINOEOOJ_0044610-140
OINOEOOJ_010362-129
306-440
FD_25_22, AnGL7 AnGL7_0282314-143
322-455
AnGL7_0350110-140
FD_25_27, AnGL8 AnGL8_0240014-143
326-458
FD_MS_7_1, AnGL28 AnGL28_0106830-163
AnGL28_0256413-144
322-455
FD_SO4_25_1_F22, AnGL30 AnGL30_0143913-145
326-457
FD_SO4_37_1, AnGL2 AnGL2_0019830-163
AnGL2_0169313-144
322-455
FD_YE_25_21, AnGL21 AnGL21_0253816-145
324-457
AnGL21_001269-140
FD_YE_37_3, AnGL26 AnGL26_0234213-145
332-463
FD_YE_37_8_2, AnGL3 AnGL3_0275613-145
328-459
FD_YE_37_9_2, AnGL4 AnGL4_0002211-142
319-454
Syntrophus buswellii, Sbus Sbus_016479-139
Sbus_0252410-142
331-464
Syntrophomonas curvata, Scurva Scurva_0092110-138
Scurva_0130613-144
321-455
Syntrophomonas erecta sporosyntropha, Sespor Sespor_0055710-140
Sespor_026122-129
306-440
Syntrophomonas wolfei methylbutyratica, Swm Swm_0048810-140
Swm_0101912-143
320-454
Terrisporobacter hibernicus, AnGL54 AnGL54_0198712-144
322-456
AnGL54_0349110-141
FD-25-21, AnGL21 AnGL21_0277110-140
AnGL21_0339914-143
322-455
Sunxiuqinia elliptica, AnGL22 AnGL22_0233913-145
332-463
Paraclostridium benzoelyticum, AnGL27 AnGL27_0094210-141
AnGL27_0157012-144
321-455
FD-MS-7-8, AnGL9 AnGL9_0124213-144
322-455
AnGL9_0131030-163
FD-YE-37-9-3, AnGL29 AnGL29_0074711-142
319-454
Methylobacterium radiotolerans, GTSA1 PaGL#34_0111313-144
324-457
PaGL#34_031959-139
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_0339814-146
325-458
Syntrophomonas erecta, GB-438 Ga0610585_0044610-140
Ga0610585_010362-129
306-440
Variovorax sp., EBFNA2 PaGL#33_0411717-146
325-458
PaGL#33_0501913-144
Variovorax paradoxus, 2u118 PaGL#32_0361817-146
325-458
PaGL#32_0436413-144
Dietzia cinnamea, 55 PaGL#56_0103515-146
PaGL#56_0174926-159
364-497
Maridesulfovibrio salexigens, AnGL23 AnGL23_0224517-147
329-462
Exiguobacterium mexicanum, AnGL24 AnGL24_009768-139
AnGL24_0131514-144
324-457
Clostridium subterminale, CB-LS10-1 AnGL53_0117210-142
319-453
Priestia megaterium, 10L1 PaGL#57_028489-139
PaGL#57_0340413-144
323-457
Variovorax paradoxus, SPNA7 PaGL#43_0365717-146
325-458
PaGL#43_0452913-144
Geodermatophilus sp., RDM14 PaGL#36_012932-127
PaGL#36_0321233-165
361-494
Methylorubrum populi, CTY4 PaGL#39_0034310-139
PaGL#39_0390113-144
324-457
Fictibacillus phosphorivorans, TY7 PaGL#38_0232814-144
320-454
Syntrophomonas wolfei, saponavida Swsap_000921-128
305-439
Swsap_0052310-141
Bacillus subtilis, 30VD-1 PaGL#66_015029-140
PaGL#66_0246114-144
323-457
Peribacillus frigoritolerans, 30N-5 PaGL#67_0393114-144
322-456
Micromonospora inositola, Utrum1 PaGL#61_0145710-141
PaGL#61_0176722-153
349-482
Sphingomonas sp., CR2A3 PaGL#62_0288814-144
322-455
PaGL#62_033119-139
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_0032110-141
AnGL54_0279012-144
322-456
Niallia taxi, AG-1 PaGL#37_0145713-144
323-457
MPOB, Sfum 639702002:Sfum_0127911-143
320-454
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11070:Spalm_0163210-141
Spalm_014171-128
305-439
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11476:Swol_0046310-140
Swol_0092712-143
320-454
Syntrophomonas zehnderi, OL-4 Szehn Szehn_015801-122
299-433
Ga0124040_109153:Szehn_0072410-141
Syntrophus aciditrophicus, SB 637859942:SYN_015289-139
637861017:SYN_0252010-142
330-464
Syntrophus gentianae, DSM8423 Sgen_027019-139
Ga0074853_101149:Sgen_0014810-142
331-464
Mucilaginibacter gossypii, cycad 4 PaGL#42_0251514-146
325-458
Ruminococcus callidus, ATCC 27760 Rcal_0074513-145
321-455

PF03725:RNase_PH_C. 3' exoribonuclease family, domain 2

Found 136 similar signatures
Acetivibrio thermocellus, DSM 1313 WP_003519032.1:LOMAGDGF_01860144-208
WP_003512267.1:LOMAGDGF_02115160-225
Clostridium acetobutylicum, DSM 1731 WP_010965114.1:FHOCHPCF_01852144-208
Acetivibrio alkalicellulosi, DSM 17461 2510062532:NJMEOJLD_02731159-224
2510064025:NJMEOJLD_04196144-208
Pseudobacteroides cellulosolvens, DSM 2933 WP_036946323.1:NEIHKHHH_00393144-208
WP_036941624.1:NEIHKHHH_02415157-223
Ruminococcus albus_7, DSM 20455 WP_013499263.1:HCIAFFOI_02743147-211
Syntrophomonas wolfei subsp. wolfei, Goettingen Ga0065332_11476:GJLLLGJL_00463158-224
GJLLLGJL_00927145-209
456-527
Paenibacillus guangzhouensis, KCTC 33171 WP_152391654.1:KDFAKKPF_00044159-222
WP_152392516.1:KDFAKKPF_01028143-208
457-528
Clostridium acetobutylicum, ATCC 824 WP_010965114.1:OJAMHIDJ_01860144-208
Ruminiclostridium herbifermentans MA18, DSM 109966 WP_137696500.1:PROKKA_01497158-225
WP_137696049.1:PROKKA_01994145-208
Syntrophomonas erecta, DSM 16215 OINOEOOJ_00446158-225
OINOEOOJ_01036131-195
443-513
FD_25_22, AnGL7 AnGL7_02823145-208
458-527
AnGL7_03501157-222
FD_25_27, AnGL8 AnGL8_02400145-208
462-529
FD_MS_7_1, AnGL28 AnGL28_01068182-247
AnGL28_02564146-209
FD_SO4_25_1_F22, AnGL30 AnGL30_01439148-212
461-532
FD_SO4_37_1, AnGL2 AnGL2_00198182-247
AnGL2_01693146-209
FD_YE_25_21, AnGL21 AnGL21_02538147-210
460-528
AnGL21_00126158-224
FD_YE_37_3, AnGL26 AnGL26_02342147-212
467-539
FD_YE_37_8_2, AnGL3 AnGL3_02756147-212
463-535
FD_YE_37_9_2, AnGL4 AnGL4_00022145-208
Syntrophus buswellii, Sbus Sbus_01647157-221
Sbus_02524144-219
467-536
Syntrophomonas curvata, Scurva Scurva_00921158-225
Scurva_01306146-210
457-528
Syntrophomonas erecta sporosyntropha, Sespor Sespor_00557158-225
Sespor_02612131-195
443-513
Syntrophomonas wolfei methylbutyratica, Swm Swm_00488158-224
Swm_01019145-209
456-527
Terrisporobacter hibernicus, AnGL54 AnGL54_01987147-210
458-526
AnGL54_03491158-225
FD-25-21, AnGL21 AnGL21_02771157-222
AnGL21_03399145-208
458-527
Sunxiuqinia elliptica, AnGL22 AnGL22_02339147-212
467-539
Paraclostridium benzoelyticum, AnGL27 AnGL27_00942158-225
AnGL27_01570147-210
457-526
FD-MS-7-8, AnGL9 AnGL9_01242146-209
457-529
AnGL9_01310182-247
FD-YE-37-9-3, AnGL29 AnGL29_00747145-208
Methylobacterium radiotolerans, GTSA1 PaGL#34_01113146-211
460-530
PaGL#34_03195158-222
Mucilaginibacter sabulilitoris, SNA2 PaGL#35_03398148-212
462-534
Syntrophomonas erecta, GB-438 Ga0610585_00446158-225
Ga0610585_01036131-195
443-513
Variovorax sp., EBFNA2 PaGL#33_04117148-212
462-531
PaGL#33_05019162-227
Variovorax paradoxus, 2u118 PaGL#32_03618148-212
462-531
PaGL#32_04364162-227
Dietzia cinnamea, 55 PaGL#56_01035163-229
Maridesulfovibrio salexigens, AnGL23 AnGL23_02245149-214
464-535
Exiguobacterium mexicanum, AnGL24 AnGL24_00976157-222
AnGL24_01315146-210
459-529
Clostridium subterminale, CB-LS10-1 AnGL53_01172145-207
Priestia megaterium, 10L1 PaGL#57_02848158-224
PaGL#57_03404146-210
459-530
Variovorax paradoxus, SPNA7 PaGL#43_03657148-212
462-531
PaGL#43_04529162-227
Geodermatophilus sp., RDM14 PaGL#36_01293146-210
Methylorubrum populi, CTY4 PaGL#39_00343158-222
PaGL#39_03901146-210
460-530
Fictibacillus phosphorivorans, TY7 PaGL#38_02328146-210
457-527
Syntrophomonas wolfei, saponavida Swsap_00092131-194
442-512
Swsap_00523159-222
Bacillus subtilis, 30VD-1 PaGL#66_01502159-225
PaGL#66_02461146-210
459-530
Peribacillus frigoritolerans, 30N-5 PaGL#67_03931146-210
458-527
Micromonospora inositola, Utrum1 PaGL#61_01457162-226
Sphingomonas sp., CR2A3 PaGL#62_02888146-211
458-528
PaGL#62_03311158-222
Terrisporobacter hibernicus, CB-LS-10-2 AnGL54_00321158-225
AnGL54_02790147-210
458-526
Niallia taxi, AG-1 PaGL#37_01457146-210
460-528
MPOB, Sfum 639702002:Sfum_01279145-210
457-525
Syntrophomonas palmitatica, JCM14374 Spalm Ga0128340_11070:Spalm_01632158-225
Spalm_01417130-194
441-512
Syntrophomonas wolfei (Swol), Goettingen.DSM2245B Ga0065332_11476:Swol_00463158-224
Swol_00927145-209
456-527
Syntrophomonas zehnderi, OL-4 Szehn Szehn_01580124-188
435-506
Ga0124040_109153:Szehn_00724158-225
Syntrophus aciditrophicus, SB 637859942:SYN_01528157-221
637861017:SYN_02520144-220
467-536
Syntrophus gentianae, DSM8423 Sgen_02701157-222
Ga0074853_101149:Sgen_00148144-219
467-536
Mucilaginibacter gossypii, cycad 4 PaGL#42_02515148-212
462-534
Ruminococcus callidus, ATCC 27760 Rcal_00745147-211
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